4.0:Information of module
2hr continuous KNO3 EPR cell
In comparison with root callus inducing medium 96 h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006811 ion transport BP 9.194e-05
GO:0050832 defense response to fungus BP 4.314e-04
GO:0009862 systemic acquired resistance, salicylic ... BP 5.415e-04
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0016579 protein deubiquitination BP 3.023e-03
GO:0042594 response to starvation BP 4.208e-03
GO:0031123 RNA 3'-end processing BP 4.608e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
2hr continuous KNO3 EPR cell		 Log2 signal ratio
root callus inducing medium 96 h
1 257645_at AT3G25790 [myb-like transcription factor family protein] 0.769 -0.522
2 256045_at AT1G07150 MAPKKK13, mitogen-activated protein kinase kinase kinase 13 0.710 -0.104
3 248551_at AT5G50200 ATNRT3.1, NRT3.1, NITRATE TRANSPORTER 3.1, WR3, WOUND-RESPONSIVE 3 0.604 -0.414
4 252367_at AT3G48360 ATBT2, BT2, BTB and TAZ domain protein 2 0.572 -0.548
5 246142_at AT5G19970 unknown 0.484 -0.143
6 246854_at AT5G26200 [Mitochondrial substrate carrier family protein] 0.417 -0.435
7 261806_at AT1G30510 ATRFNR2, root FNR 2, RFNR2, root FNR 2 0.403 -0.174
8 253179_at AT4G35200 unknown 0.400 -0.194
9 261791_at AT1G16170 unknown 0.381 -0.257
10 254962_at AT4G11050 AtGH9C3, glycosyl hydrolase 9C3, GH9C3, glycosyl hydrolase 9C3 0.378 -0.287
11 262399_at AT1G49500 unknown 0.375 -0.479
12 253043_at AT4G37540 LBD39, LOB domain-containing protein 39 0.342 0.132
13 263151_at AT1G54120 unknown 0.340 -0.332
14 264859_at AT1G24280 G6PD3, glucose-6-phosphate dehydrogenase 3 0.329 -0.054
15 247674_at AT5G59930 [Cysteine/Histidine-rich C1 domain family protein] 0.325 -0.792
16 265475_at AT2G15620 ATHNIR, ARABIDOPSIS THALIANA NITRITE REDUCTASE, NIR, NITRITE REDUCTASE, NIR1, nitrite reductase 1 0.324 -0.106
17 255230_at AT4G05390 ATRFNR1, root FNR 1, RFNR1, root FNR 1 0.324 0.103
18 263486_at AT2G22200 [Integrase-type DNA-binding superfamily protein] 0.316 -0.156
19 266313_at AT2G26980 CIPK3, CBL-interacting protein kinase 3, SnRK3.17, SNF1-RELATED PROTEIN KINASE 3.17 0.312 -0.122
20 259727_at AT1G60950 ATFD2, FERREDOXIN 2, FD2, FED A 0.309 -0.170
21 260284_at AT1G80380 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.305 -0.325
22 251396_at AT3G60750 AtTKL1, TKL1, transketolase 1 0.294 -0.071
23 264246_at AT1G60140 ATTPS10, trehalose phosphate synthase, TPS10, trehalose phosphate synthase, TPS10, TREHALOSE PHOSPHATE SYNTHASE 10 0.292 -0.364
24 256337_at AT1G72060 [serine-type endopeptidase inhibitors] 0.281 -1.234
25 259640_at AT1G52400 ATBG1, A. THALIANA BETA-GLUCOSIDASE 1, BGL1, BETA-GLUCOSIDASE HOMOLOG 1, BGLU18, beta glucosidase 18 -0.298 -0.505
26 259888_at AT1G76350 NLP5, NIN-like protein 5 -0.281 0.313
27 256750_at AT3G27150 [Galactose oxidase/kelch repeat superfamily protein] -0.267 0.533
28 266812_at AT2G44830 [Protein kinase superfamily protein] -0.266 0.161
29 260182_at AT1G70750 MyoB2, myosin binding protein 2 -0.264 -0.375
30 249545_at AT5G38030 [MATE efflux family protein] -0.255 0.426
31 262922_at AT1G79420 unknown -0.254 0.792
32 245109_at AT2G41520 DJC62, DNA J protein C62, TPR15, tetratricopeptide repeat 15 -0.244 0.149
33 251706_at AT3G56620 UMAMIT10, Usually multiple acids move in and out Transporters 10 -0.239 -0.418
34 261220_at AT1G19970 [ER lumen protein retaining receptor family protein] -0.238 0.403
35 266835_at AT2G29990 NDA2, alternative NAD(P)H dehydrogenase 2 -0.237 0.137
36 257715_at AT3G12750 AtZIP1, ZIP1, zinc transporter 1 precursor -0.233 0.157
37 250100_at AT5G16570 GLN1;4, glutamine synthetase 1;4 -0.228 0.520
38 266425_at AT2G41300 SSL1, strictosidine synthase-like 1 -0.228 -0.270
39 250039_at AT5G18370 [Disease resistance protein (TIR-NBS-LRR class) family] -0.207 -0.074
40 255727_at AT1G25510 [Eukaryotic aspartyl protease family protein] -0.201 0.600
41 248724_at AT5G47970 [Aldolase-type TIM barrel family protein] -0.191 0.234
42 266869_at AT2G44660 [ALG6, ALG8 glycosyltransferase family] -0.190 0.118
43 261435_at AT1G07615 [GTP-binding protein Obg/CgtA] -0.188 0.234
44 256481_at AT1G33430 [Galactosyltransferase family protein] -0.187 -0.066
45 264204_at AT1G22710 ATSUC2, ARABIDOPSIS THALIANA SUCROSE-PROTON SYMPORTER 2, SUC2, sucrose-proton symporter 2, SUT1, SUCROSE TRANSPORTER 1 -0.185 -0.052
46 249368_at AT5G40640 unknown -0.184 0.197
47 258158_at AT3G17790 ATACP5, ATPAP17, PAP17, purple acid phosphatase 17 -0.184 -0.614