4.0:Information of module
2hr continuous KNO3 EPR cell
In comparison with seed germinating in countinuous light 24h SL help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006811 ion transport BP 9.194e-05
GO:0050832 defense response to fungus BP 4.314e-04
GO:0009862 systemic acquired resistance, salicylic ... BP 5.415e-04
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0016579 protein deubiquitination BP 3.023e-03
GO:0042594 response to starvation BP 4.208e-03
GO:0031123 RNA 3'-end processing BP 4.608e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
2hr continuous KNO3 EPR cell		 Log2 signal ratio
seed germinating in countinuous light 24h SL
1 257645_at AT3G25790 [myb-like transcription factor family protein] 0.769 -0.136
2 256045_at AT1G07150 MAPKKK13, mitogen-activated protein kinase kinase kinase 13 0.710 -0.082
3 248551_at AT5G50200 ATNRT3.1, NRT3.1, NITRATE TRANSPORTER 3.1, WR3, WOUND-RESPONSIVE 3 0.604 1.427
4 252367_at AT3G48360 ATBT2, BT2, BTB and TAZ domain protein 2 0.572 -0.707
5 246142_at AT5G19970 unknown 0.484 -0.009
6 246854_at AT5G26200 [Mitochondrial substrate carrier family protein] 0.417 0.752
7 261806_at AT1G30510 ATRFNR2, root FNR 2, RFNR2, root FNR 2 0.403 0.305
8 253179_at AT4G35200 unknown 0.400 -0.514
9 261791_at AT1G16170 unknown 0.381 -0.119
10 254962_at AT4G11050 AtGH9C3, glycosyl hydrolase 9C3, GH9C3, glycosyl hydrolase 9C3 0.378 -0.928
11 262399_at AT1G49500 unknown 0.375 0.771
12 253043_at AT4G37540 LBD39, LOB domain-containing protein 39 0.342 -0.546
13 263151_at AT1G54120 unknown 0.340 -0.287
14 264859_at AT1G24280 G6PD3, glucose-6-phosphate dehydrogenase 3 0.329 0.887
15 247674_at AT5G59930 [Cysteine/Histidine-rich C1 domain family protein] 0.325 -1.229
16 265475_at AT2G15620 ATHNIR, ARABIDOPSIS THALIANA NITRITE REDUCTASE, NIR, NITRITE REDUCTASE, NIR1, nitrite reductase 1 0.324 0.933
17 255230_at AT4G05390 ATRFNR1, root FNR 1, RFNR1, root FNR 1 0.324 1.239
18 263486_at AT2G22200 [Integrase-type DNA-binding superfamily protein] 0.316 -0.744
19 266313_at AT2G26980 CIPK3, CBL-interacting protein kinase 3, SnRK3.17, SNF1-RELATED PROTEIN KINASE 3.17 0.312 0.103
20 259727_at AT1G60950 ATFD2, FERREDOXIN 2, FD2, FED A 0.309 0.996
21 260284_at AT1G80380 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.305 0.290
22 251396_at AT3G60750 AtTKL1, TKL1, transketolase 1 0.294 0.704
23 264246_at AT1G60140 ATTPS10, trehalose phosphate synthase, TPS10, trehalose phosphate synthase, TPS10, TREHALOSE PHOSPHATE SYNTHASE 10 0.292 0.229
24 256337_at AT1G72060 [serine-type endopeptidase inhibitors] 0.281 -0.194
25 259640_at AT1G52400 ATBG1, A. THALIANA BETA-GLUCOSIDASE 1, BGL1, BETA-GLUCOSIDASE HOMOLOG 1, BGLU18, beta glucosidase 18 -0.298 -1.195
26 259888_at AT1G76350 NLP5, NIN-like protein 5 -0.281 -0.606
27 256750_at AT3G27150 [Galactose oxidase/kelch repeat superfamily protein] -0.267 -1.079
28 266812_at AT2G44830 [Protein kinase superfamily protein] -0.266 -0.172
29 260182_at AT1G70750 MyoB2, myosin binding protein 2 -0.264 -0.271
30 249545_at AT5G38030 [MATE efflux family protein] -0.255 -0.612
31 262922_at AT1G79420 unknown -0.254 -1.058
32 245109_at AT2G41520 DJC62, DNA J protein C62, TPR15, tetratricopeptide repeat 15 -0.244 0.592
33 251706_at AT3G56620 UMAMIT10, Usually multiple acids move in and out Transporters 10 -0.239 -0.543
34 261220_at AT1G19970 [ER lumen protein retaining receptor family protein] -0.238 0.842
35 266835_at AT2G29990 NDA2, alternative NAD(P)H dehydrogenase 2 -0.237 -0.320
36 257715_at AT3G12750 AtZIP1, ZIP1, zinc transporter 1 precursor -0.233 0.352
37 250100_at AT5G16570 GLN1;4, glutamine synthetase 1;4 -0.228 -0.419
38 266425_at AT2G41300 SSL1, strictosidine synthase-like 1 -0.228 -0.556
39 250039_at AT5G18370 [Disease resistance protein (TIR-NBS-LRR class) family] -0.207 -0.766
40 255727_at AT1G25510 [Eukaryotic aspartyl protease family protein] -0.201 0.055
41 248724_at AT5G47970 [Aldolase-type TIM barrel family protein] -0.191 -0.029
42 266869_at AT2G44660 [ALG6, ALG8 glycosyltransferase family] -0.190 0.394
43 261435_at AT1G07615 [GTP-binding protein Obg/CgtA] -0.188 0.550
44 256481_at AT1G33430 [Galactosyltransferase family protein] -0.187 -0.614
45 264204_at AT1G22710 ATSUC2, ARABIDOPSIS THALIANA SUCROSE-PROTON SYMPORTER 2, SUC2, sucrose-proton symporter 2, SUT1, SUCROSE TRANSPORTER 1 -0.185 0.540
46 249368_at AT5G40640 unknown -0.184 -0.791
47 258158_at AT3G17790 ATACP5, ATPAP17, PAP17, purple acid phosphatase 17 -0.184 1.369