4.0:Information of module
root longitudinal zone-1 NaCl
In comparison with bri1-116 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0042221 response to chemical BP 4.056e-07
GO:0010033 response to organic substance BP 7.620e-07
GO:1901700 response to oxygen-containing compound BP 8.429e-07
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0000226 microtubule cytoskeleton organization BP 1.757e-05
GO:1901698 response to nitrogen compound BP 2.664e-05
GO:0010583 response to cyclopentenone BP 6.851e-05
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
root longitudinal zone-1 NaCl		 Log2 signal ratio
bri1-116
1 262128_at AT1G52690 LEA7, LATE EMBRYOGENESIS ABUNDANT 7 1.133 -0.050
2 251751_at AT3G55720 unknown 0.818 -0.159
3 247061_at AT5G66780 unknown 0.683 0.064
4 254396_at AT4G21680 AtNPF7.2, NPF7.2, NRT1/ PTR family 7.2, NRT1.8, NITRATE TRANSPORTER 1.8 0.555 0.182
5 262560_at AT1G34280 unknown 0.529 -0.045
6 263544_at AT2G21590 APL4 0.526 0.070
7 265480_at AT2G15970 ATCOR413-PM1, ARABIDOPSIS THALIANA COLD-REGULATED413 PLASMA MEMBRANE 1, ATCYP19, CYCLOPHILLIN 19, COR413-PM1, cold regulated 413 plasma membrane 1, FL3-5A3, WCOR413, WCOR413-LIKE 0.523 -0.074
8 248090_at AT5G55090 MAPKKK15, mitogen-activated protein kinase kinase kinase 15 0.518 0.033
9 261749_at AT1G76180 ERD14, EARLY RESPONSE TO DEHYDRATION 14 0.517 -0.240
10 251644_at AT3G57540 [Remorin family protein] 0.509 -0.346
11 245748_at AT1G51140 AKS1, ABA-responsive kinase substrate 1, FBH3, FLOWERING BHLH 3 0.509 -0.134
12 252102_at AT3G50970 LTI30, LOW TEMPERATURE-INDUCED 30, XERO2 0.498 0.121
13 264217_at AT1G60190 AtPUB19, PUB19, plant U-box 19 0.452 -0.368
14 262635_at AT1G06570 HPD, 4-hydroxyphenylpyruvate dioxygenase, HPPD, 4-hydroxyphenylpyruvate dioxygenase, PDS1, phytoene desaturation 1 0.445 0.002
15 265539_at AT2G15830 unknown 0.419 0.146
16 254085_at AT4G24960 ATHVA22D, ARABIDOPSIS THALIANA HVA22 HOMOLOGUE D, HVA22D, HVA22 homologue D 0.394 -0.051
17 258652_at AT3G09910 ATRAB18C, ATRABC2B, RAB GTPase homolog C2B, RABC2b, RAB GTPase homolog C2B 0.392 0.227
18 260357_at AT1G69260 AFP1, ABI five binding protein 0.387 0.056
19 247374_at AT5G63190 [MA3 domain-containing protein] 0.375 0.097
20 245734_at AT1G73480 [alpha/beta-Hydrolases superfamily protein] 0.358 0.132
21 245113_at AT2G41660 MIZ1, mizu-kussei 1 0.347 -0.095
22 263231_at AT1G05680 UGT74E2, Uridine diphosphate glycosyltransferase 74E2 0.345 -0.449
23 247723_at AT5G59220 HAI1, highly ABA-induced PP2C gene 1, SAG113, senescence associated gene 113 0.334 -0.132
24 246125_at AT5G19875 unknown 0.333 0.018
25 252210_at AT3G50410 OBP1, OBF binding protein 1 0.333 0.188
26 265119_at AT1G62570 FMO GS-OX4, flavin-monooxygenase glucosinolate S-oxygenase 4 0.332 -0.248
27 265683_at AT2G24400 SAUR38, SMALL AUXIN UPREGULATED RNA 38 0.330 0.089
28 247957_at AT5G57050 ABI2, ABA INSENSITIVE 2, AtABI2 0.328 -0.046
29 266072_at AT2G18700 ATTPS11, trehalose phosphatase/synthase 11, ATTPSB, TPS11, trehalose phosphatase/synthase 11, TPS11, TREHALOSE-6-PHOSPHATE SYNTHASE 11 0.325 -0.041
30 256300_at AT1G69490 ANAC029, Arabidopsis NAC domain containing protein 29, ATNAP, NAC-LIKE, ACTIVATED BY AP3/PI, NAP, NAC-like, activated by AP3/PI 0.324 -0.088
31 253994_at AT4G26080 ABI1, ABA INSENSITIVE 1, AtABI1 0.317 0.042
32 256861_at AT3G23920 AtBAM1, BAM1, beta-amylase 1, BMY7, BETA-AMYLASE 7, TR-BAMY 0.317 -0.084
33 264956_at AT1G76990 ACR3, ACT domain repeat 3 0.316 0.071
34 263653_at AT1G04310 ERS2, ethylene response sensor 2 0.315 0.071
35 245436_at AT4G16620 UMAMIT8, Usually multiple acids move in and out Transporters 8 0.315 -0.063
36 250948_at AT5G03490 [UDP-Glycosyltransferase superfamily protein] 0.305 0.057
37 261026_at AT1G01240 unknown 0.303 0.095
38 250849_at AT5G04410 anac078, Arabidopsis NAC domain containing protein 78, NAC2, NAC domain containing protein 2 0.303 0.017
39 252988_at AT4G38410 [Dehydrin family protein] 0.302 0.026
40 248681_at AT5G48900 [Pectin lyase-like superfamily protein] 0.300 -0.042
41 245416_at AT4G17350 unknown 0.300 -0.263
42 251272_at AT3G61890 ATHB-12, homeobox 12, ATHB12, ARABIDOPSIS THALIANA HOMEOBOX 12, HB-12, homeobox 12 0.297 -0.164
43 251039_at AT5G02020 SIS, Salt Induced Serine rich 0.297 -0.102
44 262061_at AT1G80110 ATPP2-B11, phloem protein 2-B11, PP2-B11, phloem protein 2-B11 0.288 -0.011
45 258029_at AT3G27580 ATPK7, D6PKL3, D6 PROTEIN KINASE LIKE 3 0.276 -0.033
46 265999_at AT2G24100 ASG1, ALTERED SEED GERMINATION 1 0.273 0.103
47 247013_at AT5G67480 ATBT4, BT4, BTB and TAZ domain protein 4 0.271 0.495
48 253168_at AT4G35070 [SBP (S-ribonuclease binding protein) family protein] 0.271 -0.120
49 248505_at AT5G50360 unknown 0.270 0.075
50 258939_at AT3G10020 unknown 0.270 0.074
51 246439_at AT5G17600 [RING/U-box superfamily protein] 0.264 0.222
52 261564_at AT1G01720 ANAC002, Arabidopsis NAC domain containing protein 2, ATAF1 0.254 0.094
53 266555_at AT2G46270 GBF3, G-box binding factor 3 0.251 -0.075
54 254850_at AT4G12000 [SNARE associated Golgi protein family] 0.247 0.083
55 258880_at AT3G06420 ATG8H, autophagy 8h 0.247 -0.037
56 264612_at AT1G04560 [AWPM-19-like family protein] 0.243 -0.114
57 250755_at AT5G05750 [DNAJ heat shock N-terminal domain-containing protein] 0.240 0.064
58 247287_at AT5G64230 unknown 0.240 0.032
59 252956_at AT4G38580 ATFP6, farnesylated protein 6, FP6, farnesylated protein 6, HIPP26, HEAVY METAL ASSOCIATED ISOPRENYLATED PLANT PROTEIN 26 0.238 0.023
60 250858_at AT5G04760 [Duplicated homeodomain-like superfamily protein] 0.237 0.031
61 249411_at AT5G40390 RS5, raffinose synthase 5, SIP1, seed imbibition 1-like 0.237 -0.042
62 267021_at AT2G39300 unknown 0.235 0.051
63 254648_at AT4G18550 AtDSEL, Arabidopsis thaliana DAD1-like seeding establishment-related lipase, DSEL, DAD1-like seeding establishment-related lipase 0.234 -0.283
64 253104_at AT4G36010 [Pathogenesis-related thaumatin superfamily protein] 0.232 0.026
65 250246_at AT5G13700 APAO, ATPAO1, polyamine oxidase 1, PAO1, polyamine oxidase 1 0.231 -0.305
66 261247_at AT1G20070 unknown 0.226 -0.250
67 262362_at AT1G72840 [Disease resistance protein (TIR-NBS-LRR class)] 0.221 -0.034
68 263184_at AT1G05560 UGT1, UDP-GLUCOSE TRANSFERASE 1, UGT75B1, UDP-glucosyltransferase 75B1 0.220 0.062
69 250252_at AT5G13750 ZIFL1, zinc induced facilitator-like 1 0.220 -0.195
70 258100_at AT3G23550 [MATE efflux family protein] 0.218 0.084
71 255348_at AT4G03820 unknown 0.217 -0.287
72 261062_at AT1G07530 ATGRAS2, ARABIDOPSIS THALIANA GRAS (GAI, RGA, SCR) 2, GRAS2, GRAS (GAI, RGA, SCR) 2, SCL14, SCARECROW-like 14 0.215 0.048
73 266910_at AT2G45920 [U-box domain-containing protein] 0.215 0.118
74 253672_at AT4G29820 ATCFIM-25, ARABIDOPSIS THALIANA HOMOLOG OF CFIM-25, CFIM-25, homolog of CFIM-25 0.215 0.011
75 251199_at AT3G62980 AtTIR1, TIR1, TRANSPORT INHIBITOR RESPONSE 1 0.215 0.139
76 264787_at AT2G17840 ERD7, EARLY-RESPONSIVE TO DEHYDRATION 7 0.215 -0.133
77 247669_at AT5G60170 [RNA binding (RRM/RBD/RNP motifs) family protein] 0.209 0.038
78 265216_at AT1G05100 MAPKKK18, mitogen-activated protein kinase kinase kinase 18 0.205 0.048
79 264301_at AT1G78780 [pathogenesis-related family protein] 0.204 0.066
80 251859_at AT3G54680 [proteophosphoglycan-related] 0.203 0.031
81 246016_at AT5G10720 AHK5, histidine kinase 5, CKI2, CYTOKININ INDEPENDENT 2, HK5, histidine kinase 5 0.202 -0.050
82 256433_at AT3G10985 ATWI-12, ARABIDOPSIS THALIANA WOUND-INDUCED PROTEIN 12, SAG20, senescence associated gene 20, WI12, WOUND-INDUCED PROTEIN 12 0.200 -0.013
83 249256_at AT5G41620 unknown 0.195 0.011
84 260831_at AT1G06830 [Glutaredoxin family protein] 0.195 0.311
85 265040_at AT1G03970 GBF4, G-box binding factor 4 0.192 -0.050
86 260199_at AT1G67590 [Remorin family protein] 0.191 -0.042
87 256266_at AT3G12320 LNK3, night light-inducible and clock-regulated 3 0.190 0.108
88 261901_at AT1G80920 AtJ8, AtToc12, translocon at the outer envelope membrane of chloroplasts 12, DJC22, DNA J protein C22, J8, Toc12, translocon at the outer envelope membrane of chloroplasts 12 0.190 -0.019
89 266872_at AT2G44730 [Alcohol dehydrogenase transcription factor Myb/SANT-like family protein] 0.189 0.031
90 259705_at AT1G77450 anac032, NAC domain containing protein 32, NAC032, NAC domain containing protein 32 0.187 0.020
91 264445_at AT1G27290 unknown 0.187 -0.014
92 248443_at AT5G51310 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.780 0.075
93 248252_at AT5G53250 AGP22, arabinogalactan protein 22, ATAGP22, ARABINOGALACTAN PROTEIN 22 -0.762 -0.507
94 265460_at AT2G46600 [Calcium-binding EF-hand family protein] -0.759 0.121
95 252511_at AT3G46280 [protein kinase-related] -0.748 -0.397
96 245151_at AT2G47550 [Plant invertase/pectin methylesterase inhibitor superfamily] -0.709 0.066
97 259272_at AT3G01290 AtHIR2, HIR2, hypersensitive induced reaction 2 -0.698 -0.120
98 256319_at AT1G35910 TPPD, trehalose-6-phosphate phosphatase D -0.674 0.025
99 267215_at AT2G02630 [Cysteine/Histidine-rich C1 domain family protein] -0.579 -0.152
100 264457_at AT1G10400 [UDP-Glycosyltransferase superfamily protein] -0.540 -0.029
101 249186_at AT5G43040 [Cysteine/Histidine-rich C1 domain family protein] -0.522 0.186
102 267034_at AT2G38310 PYL4, PYR1-like 4, RCAR10, regulatory components of ABA receptor 10 -0.504 0.022
103 247474_at AT5G62280 unknown -0.484 0.054
104 261840_at AT1G16070 AtTLP8, tubby like protein 8, TLP8, tubby like protein 8 -0.484 0.029
105 252827_at AT4G39950 CYP79B2, cytochrome P450, family 79, subfamily B, polypeptide 2 -0.472 -0.181
106 259853_at AT1G72300 PSY1R, PSY1 receptor -0.471 -0.134
107 248889_at AT5G46230 unknown -0.467 -0.324
108 255516_at AT4G02270 RHS13, root hair specific 13 -0.463 -0.054
109 257582_at AT1G50720 [Stigma-specific Stig1 family protein] -0.432 0.030
110 259550_at AT1G35230 AGP5, arabinogalactan protein 5 -0.432 -0.074
111 246814_at AT5G27200 ACP5, acyl carrier protein 5 -0.423 0.068
112 260403_at AT1G69810 ATWRKY36, WRKY36, WRKY DNA-binding protein 36 -0.418 -0.190
113 261384_at AT1G05440 [C-8 sterol isomerases] -0.418 0.043
114 263836_at AT2G40330 PYL6, PYR1-like 6, RCAR9, regulatory components of ABA receptor 9 -0.417 -0.030
115 261772_at AT1G76240 unknown -0.410 -0.492
116 260723_at AT1G48070 [Thioredoxin superfamily protein] -0.410 -0.049
117 259303_at AT3G05130 unknown -0.408 0.099
118 254314_at AT4G22470 [protease inhibitor/seed storage/lipid transfer protein (LTP) family protein] -0.407 0.015
119 263837_at AT2G04500 [Cysteine/Histidine-rich C1 domain family protein] -0.395 -0.279
120 256660_at AT3G12060 TBL1, TRICHOME BIREFRINGENCE-LIKE 1 -0.392 0.030
121 258242_at AT3G27640 [Transducin/WD40 repeat-like superfamily protein] -0.385 0.113
122 262350_at AT2G48150 ATGPX4, glutathione peroxidase 4, GPX4, glutathione peroxidase 4 -0.373 0.040
123 256877_at AT3G26470 [Powdery mildew resistance protein, RPW8 domain] -0.371 0.009
124 263569_at AT2G27170 SMC3, STRUCTURAL MAINTENANCE OF CHROMOSOMES 3, TTN7, TITAN7 -0.367 0.006
125 249766_at AT5G24070 [Peroxidase superfamily protein] -0.365 0.033
126 248686_at AT5G48540 [receptor-like protein kinase-related family protein] -0.363 -0.014
127 253061_at AT4G37610 BT5, BTB and TAZ domain protein 5 -0.362 -0.158
128 266941_at AT2G18980 [Peroxidase superfamily protein] -0.360 -0.018
129 247768_at AT5G58900 [Homeodomain-like transcriptional regulator] -0.360 0.083
130 263412_at AT2G28720 [Histone superfamily protein] -0.360 -0.073
131 252374_at AT3G48100 ARR5, response regulator 5, ATRR2, ARABIDOPSIS THALIANA RESPONSE REGULATOR 2, IBC6, INDUCED BY CYTOKININ 6, RR5, response regulator 5 -0.360 -0.260
132 255467_at AT4G03010 [RNI-like superfamily protein] -0.358 0.034
133 259466_at AT1G19050 ARR7, response regulator 7 -0.356 -0.085
134 251015_at AT5G02480 [HSP20-like chaperones superfamily protein] -0.348 -0.026
135 263797_at AT2G24570 ATWRKY17, WRKY17, WRKY DNA-binding protein 17 -0.345 -0.074
136 249788_at AT5G24330 ATXR6, ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6, SDG34, SET DOMAIN PROTEIN 34 -0.344 -0.128
137 249295_at AT5G41280 [Receptor-like protein kinase-related family protein] -0.343 -0.012
138 262133_at AT1G78000 SEL1, SELENATE RESISTANT 1, SULTR1;2, sulfate transporter 1;2 -0.337 0.021
139 259454_at AT1G44050 [Cysteine/Histidine-rich C1 domain family protein] -0.336 -0.050
140 256349_at AT1G54890 [Late embryogenesis abundant (LEA) protein-related] -0.332 -0.046
141 249337_at AT5G41080 AtGDPD2, GDPD2, glycerophosphodiester phosphodiesterase 2 -0.330 -0.486
142 251266_at AT3G62320 [Polynucleotidyl transferase, ribonuclease H-like superfamily protein] -0.325 0.097
143 258541_at AT3G07000 [Cysteine/Histidine-rich C1 domain family protein] -0.324 -0.181
144 253534_at AT4G31500 ATR4, ALTERED TRYPTOPHAN REGULATION 4, CYP83B1, cytochrome P450, family 83, subfamily B, polypeptide 1, RED1, RED ELONGATED 1, RNT1, RUNT 1, SUR2, SUPERROOT 2 -0.320 -0.197
145 258037_at AT3G21230 4CL5, 4-coumarate:CoA ligase 5 -0.312 -0.071
146 257645_at AT3G25790 [myb-like transcription factor family protein] -0.308 0.034
147 249794_at AT5G23530 AtCXE18, carboxyesterase 18, CXE18, carboxyesterase 18 -0.307 -0.089
148 253043_at AT4G37540 LBD39, LOB domain-containing protein 39 -0.307 0.206
149 263194_at AT1G36060 [Integrase-type DNA-binding superfamily protein] -0.304 0.380
150 250301_at AT5G11970 unknown -0.304 -0.178
151 266977_at AT2G39420 [alpha/beta-Hydrolases superfamily protein] -0.302 -0.044
152 254248_at AT4G23270 CRK19, cysteine-rich RLK (RECEPTOR-like protein kinase) 19 -0.302 -0.245
153 260472_at AT1G10990 unknown -0.299 -0.063
154 251067_at AT5G01910 unknown -0.298 -0.032
155 252089_at AT3G52110 unknown -0.286 0.036
156 256755_at AT3G25600 [Calcium-binding EF-hand family protein] -0.285 0.059
157 254749_at AT4G13130 [Cysteine/Histidine-rich C1 domain family protein] -0.285 -0.219
158 260082_at AT1G78180 [Mitochondrial substrate carrier family protein] -0.283 0.117
159 266908_at AT2G34650 ABR, ABRUPTUS, PID, PINOID -0.282 -0.006
160 264767_at AT1G61380 SD1-29, S-domain-1 29 -0.276 0.028
161 252940_at AT4G39270 [Leucine-rich repeat protein kinase family protein] -0.274 -0.102
162 265440_at AT2G20960 pEARLI4 -0.272 -0.161
163 249702_at AT5G35570 [O-fucosyltransferase family protein] -0.266 -0.008
164 264720_at AT1G70080 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] -0.266 0.006
165 245710_at AT5G04330 CYP84A4, CYTOCHROME P450 84A4 -0.263 -0.064
166 246188_at AT5G21050 [LOCATED IN: chloroplast] -0.262 0.027
167 257074_at AT3G19660 unknown -0.258 -0.161
168 262045_at AT1G80240 DGR1, DUF642 L-GalL responsive gene 1 -0.257 -0.602
169 255647_at AT4G00900 ATECA2, ARABIDOPSIS THALIANA ER-TYPE CA2+-ATPASE 2, ECA2, ER-type Ca2+-ATPase 2 -0.257 -0.095
170 253148_at AT4G35620 CYCB2;2, Cyclin B2;2 -0.252 -0.164
171 245141_at AT2G45400 BEN1, BRI1-5 ENHANCED 1 -0.252 -0.188
172 260539_at AT2G43480 [Peroxidase superfamily protein] -0.252 0.089
173 259981_at AT1G76450 [Photosystem II reaction center PsbP family protein] -0.252 0.246
174 246920_at AT5G25090 AtENODL13, ENODL13, early nodulin-like protein 13 -0.250 -0.041
175 256275_at AT3G12110 ACT11, actin-11 -0.247 -0.371
176 259660_at AT1G55260 LTPG6, glycosylphosphatidylinositol-anchored lipid protein transfer 6 -0.247 -0.099
177 251019_at AT5G02420 unknown -0.246 -0.171
178 264558_at AT1G09600 [Protein kinase superfamily protein] -0.243 0.042
179 248695_at AT5G48350 [Polynucleotidyl transferase, ribonuclease H-like superfamily protein] -0.242 0.051
180 258764_at AT3G10720 [Plant invertase/pectin methylesterase inhibitor superfamily] -0.240 -0.014
181 253270_at AT4G34160 CYCD3, CYCD3;1, CYCLIN D3;1 -0.238 0.102
182 250323_at AT5G12880 [proline-rich family protein] -0.236 -0.153