4.0:Information of module
root endodermis and quiescent center 40 mM NaCl
In comparison with whole roots 140 mM NaCl 1 hour help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0042221 response to chemical BP 9.588e-22
GO:0009415 response to water BP 1.854e-21
GO:0009414 response to water deprivation BP 1.363e-20
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0016572 histone phosphorylation BP 2.011e-08
GO:0016570 histone modification BP 3.872e-06
GO:0051567 histone H3-K9 methylation BP 4.569e-06
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
root endodermis and quiescent center 40 mM NaCl		 Log2 signal ratio
whole roots 140 mM NaCl 1 hour
1 258347_at AT3G17520 [Late embryogenesis abundant protein (LEA) family protein] 1.066 0.207
2 264612_at AT1G04560 [AWPM-19-like family protein] 1.014 0.123
3 252073_at AT3G51750 unknown 0.920 0.566
4 262128_at AT1G52690 LEA7, LATE EMBRYOGENESIS ABUNDANT 7 0.897 1.163
5 265084_at AT1G03790 AtTZF4, SOM, SOMNUS, TZF4, Tandem CCCH Zinc Finger protein 4 0.804 0.033
6 264953_at AT1G77120 ADH, ALCOHOL DEHYDROGENASE, ADH1, alcohol dehydrogenase 1, ATADH, ARABIDOPSIS THALIANA ALCOHOL DEHYDROGENASE, ATADH1 0.726 0.333
7 251971_at AT3G53160 UGT73C7, UDP-glucosyl transferase 73C7 0.719 0.636
8 258224_at AT3G15670 [Late embryogenesis abundant protein (LEA) family protein] 0.669 0.424
9 249771_at AT5G24080 [Protein kinase superfamily protein] 0.657 0.300
10 258516_at AT3G06490 AtMYB108, myb domain protein 108, BOS1, BOTRYTIS-SUSCEPTIBLE1, MYB108, myb domain protein 108 0.655 0.017
11 262148_at AT1G52560 [HSP20-like chaperones superfamily protein] 0.644 0.175
12 260264_at AT1G68500 unknown 0.642 0.083
13 250648_at AT5G06760 AtLEA4-5, Late Embryogenesis Abundant 4-5, LEA4-5, Late Embryogenesis Abundant 4-5 0.626 0.758
14 251428_at AT3G60140 BGLU30, BETA GLUCOSIDASE 30, DIN2, DARK INDUCIBLE 2, SRG2, SENESCENCE-RELATED GENE 2 0.620 0.355
15 248352_at AT5G52300 LTI65, LOW-TEMPERATURE-INDUCED 65, RD29B, RESPONSIVE TO DESSICATION 29B 0.602 0.060
16 256285_at AT3G12510 [MADS-box family protein] 0.596 0.476
17 256114_at AT1G16850 unknown 0.588 0.218
18 248337_at AT5G52310 COR78, COLD REGULATED 78, LTI140, LTI78, LOW-TEMPERATURE-INDUCED 78, RD29A, RESPONSIVE TO DESSICATION 29A 0.584 0.275
19 258498_at AT3G02480 [Late embryogenesis abundant protein (LEA) family protein] 0.580 0.824
20 261077_at AT1G07430 AIP1, AKT1 interacting protein phosphatase 1, AtAIP1, HAI2, highly ABA-induced PP2C gene 2, HON, HONSU (Korean for abnormal drowsiness) 0.579 0.831
21 263231_at AT1G05680 UGT74E2, Uridine diphosphate glycosyltransferase 74E2 0.576 0.117
22 256243_at AT3G12500 ATHCHIB, basic chitinase, B-CHI, CHI-B, HCHIB, basic chitinase, PR-3, PATHOGENESIS-RELATED 3, PR3, PATHOGENESIS-RELATED 3 0.570 0.067
23 265983_at AT2G18550 ATHB21, homeobox protein 21, HB-2, homeobox-2, HB21, homeobox protein 21 0.565 0.113
24 246992_at AT5G67430 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] 0.551 -0.004
25 245627_at AT1G56600 AtGolS2, galactinol synthase 2, GolS2, galactinol synthase 2 0.544 0.668
26 249467_at AT5G39610 ANAC092, Arabidopsis NAC domain containing protein 92, ATNAC2, NAC domain containing protein 2, ATNAC6, NAC domain containing protein 6, NAC2, NAC domain containing protein 2, NAC6, NAC domain containing protein 6, ORE1, ORESARA 1 0.534 0.136
27 252487_at AT3G46660 UGT76E12, UDP-glucosyl transferase 76E12 0.522 0.172
28 258277_at AT3G26830 CYP71B15, PAD3, PHYTOALEXIN DEFICIENT 3 0.512 0.037
29 266327_at AT2G46680 ATHB-7, homeobox 7, ATHB7, ARABIDOPSIS THALIANA HOMEOBOX 7, HB-7, homeobox 7 0.503 0.577
30 260276_at AT1G80450 [VQ motif-containing protein] 0.500 0.469
31 253722_at AT4G29190 AtC3H49, AtOZF2, Arabidopsis thaliana oxidation-related zinc finger 2, AtTZF3, OZF2, oxidation-related zinc finger 2, TZF3, tandem zinc finger 3 0.496 0.258
32 266098_at AT2G37870 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.496 0.268
33 266462_at AT2G47770 ATTSPO, TSPO(outer membrane tryptophan-rich sensory protein)-related, TSPO, TSPO(outer membrane tryptophan-rich sensory protein)-related 0.494 0.502
34 260540_at AT2G43500 NLP8, NIN-like protein 8 0.490 0.286
35 253956_at AT4G26700 ATFIM1, ARABIDOPSIS THALIANA FIMBRIN 1, FIM1, fimbrin 1 0.482 0.178
36 251644_at AT3G57540 [Remorin family protein] 0.481 0.474
37 264912_at AT1G60750 [NAD(P)-linked oxidoreductase superfamily protein] 0.480 0.273
38 254998_at AT4G09760 [Protein kinase superfamily protein] 0.478 0.044
39 251039_at AT5G02020 SIS, Salt Induced Serine rich 0.466 0.351
40 267080_at AT2G41190 [Transmembrane amino acid transporter family protein] 0.459 0.291
41 256073_at AT1G18100 E12A11, MFT, MOTHER OF FT AND TFL1 0.454 0.548
42 245445_at AT4G16750 [Integrase-type DNA-binding superfamily protein] 0.443 0.230
43 251970_at AT3G53150 UGT73D1, UDP-glucosyl transferase 73D1 0.440 0.079
44 249783_at AT5G24270 ATSOS3, SALT OVERLY SENSITIVE 3, CBL4, CALCINEURIN B-LIKE PROTEIN 4, SOS3, SALT OVERLY SENSITIVE 3 0.431 0.071
45 256208_at AT1G50930 unknown 0.431 -0.112
46 267300_at AT2G30140 UGT87A2, UDP-glucosyl transferase 87A2 0.431 0.147
47 248311_at AT5G52570 B2, BCH2, BETA CAROTENOID HYDROXYLASE 2, BETA-OHASE 2, beta-carotene hydroxylase 2, CHY2 0.430 0.281
48 253046_at AT4G37370 CYP81D8, cytochrome P450, family 81, subfamily D, polypeptide 8 0.418 0.428
49 249494_at AT5G39050 PMAT1, phenolic glucoside malonyltransferase 1 0.414 0.175
50 252321_at AT3G48510 unknown 0.411 0.434
51 264102_at AT1G79270 ECT8, evolutionarily conserved C-terminal region 8 0.410 0.056
52 254062_at AT4G25380 AtSAP10, Arabidopsis thaliana stress-associated protein 10, SAP10, stress-associated protein 10 0.409 0.215
53 252232_at AT3G49760 AtbZIP5, basic leucine-zipper 5, bZIP5, basic leucine-zipper 5 0.405 0.081
54 246831_at AT5G26340 ATSTP13, SUGAR TRANSPORT PROTEIN 13, MSS1, STP13, SUGAR TRANSPORT PROTEIN 13 0.404 0.106
55 261480_at AT1G14280 PKS2, phytochrome kinase substrate 2 -0.761 -0.534
56 259365_at AT1G13300 HRS1, HYPERSENSITIVITY TO LOW PI-ELICITED PRIMARY ROOT SHORTENING 1 -0.629 -0.075
57 255524_at AT4G02330 AtPME41, ATPMEPCRB, PME41, pectin methylesterase 41 -0.515 0.022
58 264157_at AT1G65310 ATXTH17, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 17, XTH17, xyloglucan endotransglucosylase/hydrolase 17 -0.508 -0.510
59 258480_at AT3G02640 unknown -0.496 -0.114
60 246231_at AT4G37080 unknown -0.495 -0.047
61 252374_at AT3G48100 ARR5, response regulator 5, ATRR2, ARABIDOPSIS THALIANA RESPONSE REGULATOR 2, IBC6, INDUCED BY CYTOKININ 6, RR5, response regulator 5 -0.445 0.109
62 261825_at AT1G11545 XTH8, xyloglucan endotransglucosylase/hydrolase 8 -0.439 -0.298
63 247832_at AT5G58550 EOL2, ETO1-like 2 -0.427 -0.196
64 248252_at AT5G53250 AGP22, arabinogalactan protein 22, ATAGP22, ARABINOGALACTAN PROTEIN 22 -0.422 -0.357
65 245343_at AT4G15830 [ARM repeat superfamily protein] -0.408 -0.086
66 246075_at AT5G20410 ATMGD2, ARABIDOPSIS THALIANA MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 2, MGD2, monogalactosyldiacylglycerol synthase 2 -0.405 -0.137
67 259290_at AT3G11520 CYC2, CYCLIN 2, CYCB1;3, CYCLIN B1;3 -0.396 -0.067
68 246200_at AT4G37240 unknown -0.365 -0.147
69 258006_at AT3G19400 [Cysteine proteinases superfamily protein] -0.341 -0.078
70 264377_at AT2G25060 AtENODL14, ENODL14, early nodulin-like protein 14 -0.312 -0.103
71 255460_at AT4G02800 unknown -0.305 -0.006
72 247524_at AT5G61440 ACHT5, atypical CYS HIS rich thioredoxin 5 -0.303 -0.174
73 257076_at AT3G19680 unknown -0.302 -0.335
74 249885_at AT5G22940 F8H, FRA8 homolog -0.286 -0.268
75 248865_at AT5G46790 PYL1, PYR1-like 1, RCAR12, regulatory components of ABA receptor 12 -0.273 -0.137
76 250663_at AT5G07110 PRA1.B6, prenylated RAB acceptor 1.B6 -0.264 -0.178
77 245347_at AT4G14890 FdC1, ferredoxin C 1 -0.262 -0.255
78 246920_at AT5G25090 AtENODL13, ENODL13, early nodulin-like protein 13 -0.255 -0.167
79 248807_at AT5G47500 PME5, pectin methylesterase 5 -0.255 -0.161
80 245176_at AT2G47440 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.254 -0.147
81 256091_at AT1G20693 HMG BETA 1, HIGH MOBILITY GROUP BETA 1, HMGB2, high mobility group B2, NFD02, NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP D 02, NFD2, NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP D 2 -0.252 0.002
82 253478_at AT4G32350 [Regulator of Vps4 activity in the MVB pathway protein] -0.251 0.078
83 249562_at AT5G38350 [Disease resistance protein (NBS-LRR class) family] -0.246 -0.055
84 267344_at AT2G44230 unknown -0.243 -0.094
85 255265_at AT4G05190 ATK5, kinesin 5 -0.238 0.029
86 264521_at AT1G10020 unknown -0.236 -0.095
87 265085_at AT1G03780 AtTPX2, TPX2, targeting protein for XKLP2 -0.235 -0.003
88 246142_at AT5G19970 unknown -0.234 0.014
89 252615_at AT3G45230 APAP1, ARABINOXYLAN PECTIN ARABINOGALACTAN PROTEIN 1 -0.234 -0.218
90 256157_at AT1G13580 LAG13, LAG1 longevity assurance homolog 3, LOH3, LAG One Homologue 3 -0.232 -0.282
91 254492_at AT4G20260 ATPCAP1, ARABIDOPSIS THALIANA PLASMA-MEMBRANE ASSOCIATED CATION-BINDING PROTEIN 1, MDP25, microtubule-destabilizing protein 25, PCAP1, plasma-membrane associated cation-binding protein 1 -0.230 -0.055
92 261791_at AT1G16170 unknown -0.227 -0.097
93 257739_at AT3G27470 unknown -0.226 -0.108
94 255773_at AT1G18590 ATSOT17, SULFOTRANSFERASE 17, ATST5C, ARABIDOPSIS SULFOTRANSFERASE 5C, SOT17, sulfotransferase 17 -0.222 -0.128
95 253043_at AT4G37540 LBD39, LOB domain-containing protein 39 -0.221 -0.195
96 252243_at AT3G50120 unknown -0.211 -0.000
97 245056_at AT2G26480 UGT76D1, UDP-glucosyl transferase 76D1 -0.210 0.056
98 255716_at AT4G00330 CRCK2, calmodulin-binding receptor-like cytoplasmic kinase 2 -0.210 -0.015
99 267339_at AT2G39870 unknown -0.205 -0.105
100 264712_at AT1G09810 ECT11, evolutionarily conserved C-terminal region 11 -0.204 -0.082
101 249862_at AT5G22920 [CHY-type/CTCHY-type/RING-type Zinc finger protein] -0.202 0.027
102 253946_at AT4G26790 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.201 -0.300
103 252488_at AT3G46700 [UDP-Glycosyltransferase superfamily protein] -0.199 0.007
104 263596_at AT2G01900 [DNAse I-like superfamily protein] -0.188 -0.210
105 248691_at AT5G48310 unknown -0.185 -0.053
106 250828_at AT5G05250 unknown -0.184 -0.084
107 254064_at AT4G25410 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.183 -0.091