4.0:Information of module
whole roots 140 mM NaCl 16 hour
In comparison with bri1-116 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:1901700 response to oxygen-containing compound BP 7.224e-10
GO:0042221 response to chemical BP 1.542e-09
GO:0050896 response to stimulus BP 2.103e-09
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009987 cellular process BP 4.188e-08
GO:0000302 response to reactive oxygen species BP 6.508e-08
GO:0071704 organic substance metabolic process BP 2.204e-06
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
whole roots 140 mM NaCl 16 hour		 Log2 signal ratio
bri1-116
1 262128_at AT1G52690 LEA7, LATE EMBRYOGENESIS ABUNDANT 7 1.573 -0.050
2 258498_at AT3G02480 [Late embryogenesis abundant protein (LEA) family protein] 1.405 -0.055
3 256779_at AT3G13784 AtcwINV5, cell wall invertase 5, CWINV5, cell wall invertase 5 1.249 0.128
4 254823_at AT4G12580 unknown 1.160 -0.060
5 266274_at AT2G29380 HAI3, highly ABA-induced PP2C gene 3 0.909 -0.049
6 250624_at AT5G07330 unknown 0.831 -0.052
7 245982_at AT5G13170 AtSWEET15, SAG29, senescence-associated gene 29, SWEET15 0.824 0.037
8 262148_at AT1G52560 [HSP20-like chaperones superfamily protein] 0.817 0.043
9 266690_at AT2G19900 ATNADP-ME1, Arabidopsis thaliana NADP-malic enzyme 1, NADP-ME1, NADP-malic enzyme 1 0.806 0.013
10 247718_at AT5G59310 LTP4, lipid transfer protein 4 0.794 0.210
11 246241_at AT4G37050 AtPLAIVC, phospholipase A IVC, PLA V, PLAIII{beta}, patatin-related phospholipase III beta, PLP4, PATATIN-like protein 4 0.792 -0.136
12 251272_at AT3G61890 ATHB-12, homeobox 12, ATHB12, ARABIDOPSIS THALIANA HOMEOBOX 12, HB-12, homeobox 12 0.731 -0.164
13 247723_at AT5G59220 HAI1, highly ABA-induced PP2C gene 1, SAG113, senescence associated gene 113 0.725 -0.132
14 261077_at AT1G07430 AIP1, AKT1 interacting protein phosphatase 1, AtAIP1, HAI2, highly ABA-induced PP2C gene 2, HON, HONSU (Korean for abnormal drowsiness) 0.722 0.160
15 254809_at AT4G12410 SAUR35, SMALL AUXIN UPREGULATED RNA 35 0.721 -0.235
16 264617_at AT2G17660 [RPM1-interacting protein 4 (RIN4) family protein] 0.709 -0.039
17 252515_at AT3G46230 ATHSP17.4, ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.4, HSP17.4, heat shock protein 17.4 0.676 -0.394
18 265922_at AT2G18480 [Major facilitator superfamily protein] 0.633 -0.034
19 257672_at AT3G20300 unknown 0.624 0.054
20 247421_at AT5G62800 [Protein with RING/U-box and TRAF-like domains] 0.618 0.021
21 248333_at AT5G52390 [PAR1 protein] 0.613 0.038
22 253344_at AT4G33550 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.595 0.033
23 248184_at AT5G54050 [Cysteine/Histidine-rich C1 domain family protein] 0.582 0.013
24 254667_at AT4G18280 [glycine-rich cell wall protein-related] 0.573 -0.221
25 259618_at AT1G48000 AtMYB112, myb domain protein 112, MYB112, myb domain protein 112 0.566 0.058
26 250859_at AT5G04660 CYP77A4, cytochrome P450, family 77, subfamily A, polypeptide 4 0.564 0.001
27 248505_at AT5G50360 unknown 0.551 0.075
28 248392_at AT5G52050 [MATE efflux family protein] 0.537 0.401
29 262113_at AT1G02820 AtLEA3, LEA3, late embryogenesis abundant 3 0.530 0.437
30 256114_at AT1G16850 unknown 0.522 -0.018
31 262357_at AT1G73040 [Mannose-binding lectin superfamily protein] 0.506 0.041
32 252321_at AT3G48510 unknown 0.499 -0.225
33 266327_at AT2G46680 ATHB-7, homeobox 7, ATHB7, ARABIDOPSIS THALIANA HOMEOBOX 7, HB-7, homeobox 7 0.495 -0.168
34 261266_at AT1G26770 AT-EXP10, ARABIDOPSIS THALIANA EXPANSIN 10, ATEXP10, ARABIDOPSIS THALIANA EXPANSIN 10, ATEXPA10, expansin A10, ATHEXP ALPHA 1.1, ARABIDOPSIS THALIANA EXPANSIN ALPHA 1.1, EXP10, EXPANSIN 10, EXPA10, expansin A10 0.475 -0.125
35 267391_at AT2G44480 BGLU17, beta glucosidase 17 0.473 0.074
36 247657_at AT5G59845 [Gibberellin-regulated family protein] 0.468 -0.112
37 258695_at AT3G09640 APX1B, ASCORBATE PEROXIDASE 1B, APX2, ascorbate peroxidase 2 0.462 0.027
38 265823_at AT2G35760 [Uncharacterised protein family (UPF0497)] 0.458 -0.084
39 245953_at AT5G28520 [Mannose-binding lectin superfamily protein] 0.449 0.092
40 249353_at AT5G40420 OLE2, OLEOSIN 2, OLEO2, oleosin 2 0.447 -0.133
41 247120_at AT5G65990 [Transmembrane amino acid transporter family protein] 0.436 0.101
42 246617_at AT5G36270 [similar to DHAR2, glutathione dehydrogenase (ascorbate) [Arabidopsis thaliana] (TAIR:AT1G75270.1)] 0.432 0.017
43 252888_at AT4G39210 APL3 0.432 0.067
44 263959_at AT2G36210 SAUR45, SMALL AUXIN UPREGULATED RNA 45 0.416 0.036
45 257135_at AT3G12900 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.947 0.089
46 249866_at AT5G23010 IMS3, 2-ISOPROPYLMALATE SYNTHASE 3, MAM1, methylthioalkylmalate synthase 1 -0.870 0.465
47 251072_at AT5G01740 [Nuclear transport factor 2 (NTF2) family protein] -0.601 0.405
48 262091_at AT1G56160 ATMYB72, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 72, MYB72, myb domain protein 72 -0.554 0.048
49 263836_at AT2G40330 PYL6, PYR1-like 6, RCAR9, regulatory components of ABA receptor 9 -0.535 -0.030
50 253044_at AT4G37290 unknown -0.518 -0.242
51 257373_at AT2G43140 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.507 -0.101
52 264734_at AT1G62280 SLAH1, SLAC1 homologue 1 -0.483 0.068
53 247293_at AT5G64510 TIN1, tunicamycin induced 1 -0.450 -0.267
54 262039_at AT1G80050 APT2, adenine phosphoribosyl transferase 2, ATAPT2, PHT1.1 -0.440 0.191
55 251195_at AT3G62930 [Thioredoxin superfamily protein] -0.435 0.079
56 248727_at AT5G47990 CYP705A5, cytochrome P450, family 705, subfamily A, polypeptide 5, THAD, THALIAN-DIOL DESATURASE, THAD1, THALIAN-DIOL DESATURASE -0.382 -0.531
57 262162_at AT1G78020 unknown -0.369 -0.159
58 251293_at AT3G61930 unknown -0.366 -0.008
59 255814_at AT1G19900 [glyoxal oxidase-related protein] -0.336 -0.541
60 264710_at AT1G09790 COBL6, COBRA-like protein 6 precursor -0.332 0.067
61 248725_at AT5G47980 [HXXXD-type acyl-transferase family protein] -0.329 -0.628
62 253305_at AT4G33666 unknown -0.325 -0.290
63 255876_at AT2G40480 unknown -0.323 -0.171
64 258984_at AT3G08970 ATERDJ3A, TMS1, THERMOSENSITIVE MALE STERILE 1 -0.323 -0.110
65 253696_at AT4G29740 ATCKX4, CKX4, cytokinin oxidase 4 -0.320 0.095
66 256057_at AT1G07180 ATNDI1, ARABIDOPSIS THALIANA INTERNAL NON-PHOSPHORYLATING NAD ( P ) H DEHYDROGENASE, NDA1, alternative NAD(P)H dehydrogenase 1 -0.316 0.124
67 264832_at AT1G03660 [Ankyrin-repeat containing protein] -0.310 -0.232
68 246104_at AT5G28650 ATWRKY74, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 74, WRKY74, WRKY DNA-binding protein 74 -0.294 0.013
69 256359_at AT1G66460 [Protein kinase superfamily protein] -0.293 -0.083
70 257334_at ATMG01370 ORF111D -0.292 0.020
71 247435_at AT5G62480 ATGSTU9, glutathione S-transferase tau 9, GST14, GLUTATHIONE S-TRANSFERASE 14, GST14B, GLUTATHIONE S-TRANSFERASE 14B, GSTU9, glutathione S-transferase tau 9 -0.278 -0.323
72 252607_at AT3G44990 AtXTH31, ATXTR8, XTH31, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 31, XTR8, xyloglucan endo-transglycosylase-related 8 -0.269 -0.083
73 250471_at AT5G10170 ATMIPS3, MYO-INOSITOL-1-PHOSTPATE SYNTHASE 3, MIPS3, myo-inositol-1-phosphate synthase 3 -0.266 0.156
74 267483_at AT2G02810 ATUTR1, UDP-GALACTOSE TRANSPORTER 1, UTR1, UDP-galactose transporter 1 -0.257 0.150
75 266711_at AT2G46740 AtGulLO5, GulLO5, L -gulono-1,4-lactone ( L -GulL) oxidase 5 -0.246 -0.023
76 251420_at AT3G60490 [Integrase-type DNA-binding superfamily protein] -0.243 -0.308
77 251886_at AT3G54260 TBL36, TRICHOME BIREFRINGENCE-LIKE 36 -0.230 0.143
78 260034_at AT1G68810 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.226 -0.222
79 252374_at AT3G48100 ARR5, response regulator 5, ATRR2, ARABIDOPSIS THALIANA RESPONSE REGULATOR 2, IBC6, INDUCED BY CYTOKININ 6, RR5, response regulator 5 -0.225 -0.260
80 247755_at AT5G59090 ATSBT4.12, subtilase 4.12, SBT4.12, subtilase 4.12 -0.219 -0.294
81 261527_at AT1G14390 [Leucine-rich repeat protein kinase family protein] -0.219 0.041
82 244983_at ATCG00790 RPL16, ribosomal protein L16 -0.216 -0.091
83 252433_at AT3G47560 [alpha/beta-Hydrolases superfamily protein] -0.212 0.259
84 253227_at AT4G35030 [Protein kinase superfamily protein] -0.210 0.045
85 256736_at AT3G29410 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] -0.208 0.053
86 260053_at AT1G78120 TPR12, tetratricopeptide repeat 12 -0.207 -0.081
87 247327_at AT5G64120 AtPRX71, PRX71, peroxidase 71 -0.204 -0.305