4.0:Information of module
aba3-1
In comparison with cat2-2; harvested 8h continiously maintained in high CO2; help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006952 defense response BP 9.948e-22
GO:0002376 immune system process BP 2.329e-20
GO:0045087 innate immune response BP 2.720e-20
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006364 rRNA processing BP 1.452e-07
GO:0016072 rRNA metabolic process BP 1.603e-07
GO:0042254 ribosome biogenesis BP 2.114e-07
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
aba3-1		 Log2 signal ratio
cat2-2; harvested 8h continiously maintained in high CO2;
1 258277_at AT3G26830 CYP71B15, PAD3, PHYTOALEXIN DEFICIENT 3 0.823 -0.320
2 267567_at AT2G30770 CYP71A13, cytochrome P450, family 71, subfamily A, polypeptide 13 0.778 -0.118
3 256012_at AT1G19250 FMO1, flavin-dependent monooxygenase 1 0.745 -0.576
4 266292_at AT2G29350 SAG13, senescence-associated gene 13 0.743 -0.105
5 254271_at AT4G23150 CRK7, cysteine-rich RLK (RECEPTOR-like protein kinase) 7 0.710 -0.471
6 263948_at AT2G35980 ATNHL10, ARABIDOPSIS NDR1/HIN1-LIKE 10, NHL10, NDR1/HIN1-LIKE, YLS9, YELLOW-LEAF-SPECIFIC GENE 9 0.681 -0.282
7 261763_at AT1G15520 ABCG40, ATP-binding cassette G40, ATABCG40, Arabidopsis thaliana ATP-binding cassette G40, ATPDR12, PLEIOTROPIC DRUG RESISTANCE 12, PDR12, pleiotropic drug resistance 12 0.672 -0.130
8 246405_at AT1G57630 [Toll-Interleukin-Resistance (TIR) domain family protein] 0.670 -0.282
9 250476_at AT5G10140 AGL25, AGAMOUS-like 25, FLC, FLOWERING LOCUS C, FLF, FLOWERING LOCUS F, RSB6, REDUCED STEM BRANCHING 6 0.660 0.099
10 259507_at AT1G43910 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.603 -0.368
11 249481_at AT5G38900 [Thioredoxin superfamily protein] 0.602 -0.366
12 252977_at AT4G38560 [Arabidopsis phospholipase-like protein (PEARLI 4) family] 0.569 -0.120
13 261021_at AT1G26380 [FAD-binding Berberine family protein] 0.542 -0.306
14 263783_at AT2G46400 ATWRKY46, WRKY DNA-BINDING PROTEIN 46, WRKY46, WRKY DNA-binding protein 46 0.501 -0.220
15 247314_at AT5G64000 ATSAL2, SAL2 0.483 -0.289
16 256989_at AT3G28580 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.467 -0.253
17 252131_at AT3G50930 BCS1, cytochrome BC1 synthesis 0.467 -0.278
18 250062_at AT5G17760 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.465 -0.157
19 256874_at AT3G26320 CYP71B36, cytochrome P450, family 71, subfamily B, polypeptide 36 0.444 -0.225
20 256526_at AT1G66090 [Disease resistance protein (TIR-NBS class)] 0.424 -0.299
21 266017_at AT2G18690 unknown 0.417 -0.272
22 246821_at AT5G26920 CBP60G, Cam-binding protein 60-like G 0.408 -0.318
23 245401_at AT4G17670 unknown 0.402 -0.155
24 257540_at AT3G21520 AtDMP1, Arabidopsis thaliana DUF679 domain membrane protein 1, DMP1, DUF679 domain membrane protein 1 0.390 -0.079
25 260015_at AT1G67980 CCOAMT, caffeoyl-CoA 3-O-methyltransferase 0.388 -0.466
26 262085_at AT1G56060 unknown 0.386 -0.227
27 248164_at AT5G54490 PBP1, pinoid-binding protein 1 0.374 -0.274
28 246099_at AT5G20230 ATBCB, blue-copper-binding protein, BCB, BLUE COPPER BINDING PROTEIN, BCB, blue-copper-binding protein, SAG14, SENESCENCE ASSOCIATED GENE 14 0.355 -0.247
29 249071_at AT5G44050 [MATE efflux family protein] -0.545 0.058
30 261059_at AT1G01250 [Integrase-type DNA-binding superfamily protein] -0.379 0.094
31 260773_at AT1G78440 ATGA2OX1, Arabidopsis thaliana gibberellin 2-oxidase 1, GA2OX1, gibberellin 2-oxidase 1 -0.360 0.034
32 251084_at AT5G01520 AIRP2, ABA Insensitive RING Protein 2, AtAIRP2 -0.315 0.057
33 249105_at AT5G43640 [Ribosomal protein S19 family protein] -0.281 0.012
34 257672_at AT3G20300 unknown -0.257 0.152
35 251297_at AT3G62020 GLP10, germin-like protein 10 -0.224 0.069
36 265949_at AT2G18540 [RmlC-like cupins superfamily protein] -0.222 -0.050
37 250281_at AT5G13240 [transcription regulators] -0.220 0.047
38 254296_at AT4G23090 unknown -0.218 0.044
39 249814_at AT5G23840 [MD-2-related lipid recognition domain-containing protein] -0.210 0.025
40 251028_at AT5G02230 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] -0.208 0.011
41 266611_at AT2G14960 GH3.1 -0.207 0.021
42 255521_at AT4G02280 ATSUS3, SUS3, sucrose synthase 3 -0.207 0.055
43 254258_at AT4G23410 TET5, tetraspanin5 -0.197 0.078
44 248073_at AT5G55720 [Pectin lyase-like superfamily protein] -0.196 -0.015
45 266153_at AT2G12320 unknown -0.195 0.069
46 255450_at AT4G02850 [phenazine biosynthesis PhzC/PhzF family protein] -0.192 0.061
47 256577_at AT3G28220 [TRAF-like family protein] -0.192 0.166
48 263617_at AT2G04670 [gypsy-like retrotransposon family, has a 1.2e-313 P-value blast match to GB:AAD27547 polyprotein (Gypsy_Ty3-element) (Oryza sativa subsp. indica)] -0.190 -0.014
49 256444_at AT3G11060 unknown -0.189 -0.028
50 255005_at AT4G09990 GXM2, glucuronoxylan methyltransferase 2 -0.186 0.144
51 257274_at AT3G14510 [Polyprenyl synthetase family protein] -0.173 -0.056
52 247633_at AT5G60470 [C2H2 and C2HC zinc fingers superfamily protein] -0.164 0.046
53 248104_at AT5G55250 AtIAMT1, IAMT1, IAA carboxylmethyltransferase 1 -0.160 0.044
54 252243_at AT3G50120 unknown -0.158 0.031
55 252460_at AT3G47230 unknown -0.157 0.006