4.0:Information of module
NaCl scm
In comparison with Laer pretreat GA Flg22 1h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0043248 proteasome assembly BP 9.235e-04
GO:0051788 response to misfolded protein BP 9.235e-04
GO:0035966 response to topologically incorrect prot... BP 3.300e-03
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009069 serine family amino acid metabolic proce... BP 1.422e-03
GO:0042445 hormone metabolic process BP 4.370e-03
GO:0034754 cellular hormone metabolic process BP 4.402e-03
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
NaCl scm		 Log2 signal ratio
Laer pretreat GA Flg22 1h
1 257143_at AT3G20110 CYP705A20, cytochrome P450, family 705, subfamily A, polypeptide 20 0.441 0.068
2 262305_at AT1G70950 [TPX2 (targeting protein for Xklp2) protein family] 0.413 0.098
3 265463_at AT2G37090 IRX9, IRREGULAR XYLEM 9 0.361 0.003
4 267511_at AT2G45670 [calcineurin B subunit-related] 0.355 0.084
5 245005_at ATCG00330 RPS14, chloroplast ribosomal protein S14 0.346 -0.060
6 253211_at AT4G34880 [Amidase family protein] 0.340 0.062
7 251875_at AT3G54270 [sucrose-6F-phosphate phosphohydrolase family protein] 0.291 0.209
8 251824_at AT3G55090 ABCG16, ATP-binding cassette G16 0.281 0.502
9 253098_at AT4G37340 CYP81D3, cytochrome P450, family 81, subfamily D, polypeptide 3 0.266 0.083
10 260113_at AT1G63300 [Myosin heavy chain-related protein] 0.266 0.031
11 253122_at AT4G35987 CaM KMT, calmodulin N-methyltransferase 0.262 0.125
12 257593_at AT3G24840 [Sec14p-like phosphatidylinositol transfer family protein] 0.245 0.356
13 266715_at AT2G46780 [RNA-binding (RRM/RBD/RNP motifs) family protein] 0.245 0.123
14 260987_at AT1G53590 NTMC2T6.1, NTMC2TYPE6.1 0.241 0.073
15 262220_at AT1G74740 ATCPK30, CDPK1A, CALCIUM-DEPENDENT PROTEIN KINASE 1A, CPK30, calcium-dependent protein kinase 30 0.240 0.369
16 253782_at AT4G28590 AtECB1, ECB1, early chloroplast biogenesis 1, MRL7, Mesophyll-cell RNAi Library line 7, SVR4, SUPPRESSOR OF VARIEGATION 4 0.238 0.037
17 258046_at AT3G21220 ATMAP2K_ALPHA, ATMEK5, ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5, ATMKK5, ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5, MAP2K_A, MEK5, MAP KINASE KINASE 5, MKK5, MAP kinase kinase 5 0.234 0.153
18 253034_at AT4G38230 ATCPK26, ARABIDOPSIS THALIANA CALCIUM-DEPENDENT PROTEIN KINASE 26, CPK26, calcium-dependent protein kinase 26 0.200 0.110
19 256950_at AT3G19080 [SWIB complex BAF60b domain-containing protein] 0.198 0.004
20 246614_at AT5G35410 ATSOS2, SALT OVERLY SENSITIVE 2, CIPK24, CBL-INTERACTING PROTEIN KINASE 24, SNRK3.11, SNF1-RELATED PROTEIN KINASE 3.11, SOS2, SALT OVERLY SENSITIVE 2 0.191 0.225
21 264700_at AT1G70100 unknown 0.186 -0.126
22 246277_at AT4G36460 unknown 0.173 0.096
23 245055_at AT2G26470 unknown 0.171 -0.048
24 250913_at AT5G03770 AtKdtA, KDTA, KDO transferase A 0.163 0.021
25 261363_at AT1G41830 SKS6, SKU5 SIMILAR 6, SKS6, SKU5-similar 6 0.156 -0.232
26 251887_at AT3G54170 ATFIP37, FKBP12 interacting protein 37, FIP37, FKBP12 interacting protein 37 0.152 0.029
27 260021_at AT1G30010 nMAT1, nuclear maturase 1 0.145 0.069
28 246529_at AT5G15730 AtCRLK2, CRLK2, calcium/calmodulin-regulated receptor-like kinase 2 0.139 0.295
29 262410_at AT1G34770 unknown 0.137 0.222
30 261125_at AT1G04990 [Zinc finger C-x8-C-x5-C-x3-H type family protein] 0.137 0.176
31 266713_at AT2G46760 AtGulLO6, GulLO6, L -gulono-1,4-lactone ( L -GulL) oxidase 6 0.133 0.135
32 258589_at AT3G04290 ATLTL1, LTL1, Li-tolerant lipase 1 0.133 0.059
33 254860_at AT4G12110 ATSMO1-1, SMO1-1, sterol-4alpha-methyl oxidase 1-1 0.132 -0.206
34 260585_at AT2G43650 EMB2777, EMBRYO DEFECTIVE 2777 0.128 -0.059
35 245280_at AT4G16845 VRN2, REDUCED VERNALIZATION RESPONSE 2 0.127 0.117
36 256137_at AT1G48690 [Auxin-responsive GH3 family protein] 0.126 0.033
37 244931_at ATMG00630 ORF110B 0.125 0.016
38 262640_at AT1G62760 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.123 0.028
39 249603_at AT5G37210 [Cysteine/Histidine-rich C1 domain family protein] 0.122 0.081
40 249189_at AT5G42780 AtHB27, homeobox protein 27, HB27, homeobox protein 27, ZHD13, ZINC FINGER HOMEODOMAIN 13 0.116 0.088
41 256132_at AT1G13610 [alpha/beta-Hydrolases superfamily protein] 0.114 0.061
42 252822_at AT4G39955 [alpha/beta-Hydrolases superfamily protein] 0.111 -0.015
43 265585_at AT2G20000 CDC27b, HBT, HOBBIT 0.107 -0.000
44 258008_at AT3G19430 [late embryogenesis abundant protein-related / LEA protein-related] 0.106 0.179
45 260410_at AT1G69870 AtNPF2.13, NPF2.13, NRT1/ PTR family 2.13, NRT1.7, nitrate transporter 1.7 -0.367 -0.277
46 256584_at AT3G28750 unknown -0.360 0.088
47 257028_at AT3G19230 [Leucine-rich repeat (LRR) family protein] -0.335 0.062
48 255277_at AT4G04890 PDF2, protodermal factor 2 -0.309 -0.209
49 246664_at AT5G34800 [pseudogene] -0.305 0.094
50 263052_at AT2G13430 unknown -0.304 0.047
51 265536_at AT2G15880 [Leucine-rich repeat (LRR) family protein] -0.291 0.203
52 260769_at AT1G49010 [Duplicated homeodomain-like superfamily protein] -0.264 -0.221
53 260546_at AT2G43520 ATTI2, trypsin inhibitor protein 2, TI2, trypsin inhibitor protein 2 -0.258 -0.042
54 260804_at AT1G78410 [VQ motif-containing protein] -0.256 -0.314
55 256860_at AT3G23840 CER26-LIKE, CER26-LIKE -0.254 0.015
56 249586_at AT5G37840 unknown -0.249 0.685
57 256924_at AT3G29590 AT5MAT -0.248 0.132
58 263197_at AT1G53930 [Ubiquitin-like superfamily protein] -0.243 0.061
59 251916_at AT3G53960 [Major facilitator superfamily protein] -0.241 -0.106
60 264480_at AT1G77300 ASHH2, ASH1 HOMOLOG 2, CCR1, CAROTENOID CHLOROPLAST REGULATORY1, EFS, EARLY FLOWERING IN SHORT DAYS, LAZ2, LAZARUS 2, SDG8, SET DOMAIN GROUP 8 -0.237 0.130
61 265998_at AT2G24270 ALDH11A3, aldehyde dehydrogenase 11A3 -0.236 -0.213
62 250381_at AT5G11610 [Exostosin family protein] -0.231 -0.325
63 245992_at AT5G20690 PRK6, pollen receptor like kinase 6 -0.219 0.062
64 247226_at AT5G65100 [Ethylene insensitive 3 family protein] -0.216 0.076
65 252835_at AT3G42060 [myosin heavy chain-related] -0.215 0.068
66 257196_at AT3G23790 AAE16, acyl activating enzyme 16 -0.215 -0.131
67 265403_at AT2G16690 unknown -0.214 0.113
68 254212_at AT4G23580 [Galactose oxidase/kelch repeat superfamily protein] -0.210 0.070
69 249777_at AT5G24210 [alpha/beta-Hydrolases superfamily protein] -0.209 0.103
70 265722_at AT2G40100 LHCB4.3, light harvesting complex photosystem II -0.209 -0.251
71 254319_at AT4G22560 unknown -0.208 0.104
72 256942_at AT3G23290 LSH4, LIGHT SENSITIVE HYPOCOTYLS 4 -0.207 0.072
73 260019_at AT1G41825 [gypsy-like retrotransposon family (Athila), has a 1.9e-98 P-value blast match to gb|AAL06422.1|AF378081_1 reverse transcriptase (Athila4) (Arabidopsis thaliana) (Gypsy_Ty3-family)] -0.203 0.046
74 254869_at AT4G11890 ARCK1, ABA- AND OSMOTIC-STRESS-INDUCIBLE RECEPTOR-LIKE CYTOSOLIC KINASE1, CRK45, cysteine-rich receptor-like protein kinase 45 -0.197 0.128
75 248050_at AT5G56100 [glycine-rich protein / oleosin] -0.195 -0.038
76 252263_at AT3G49520 [F-box and associated interaction domains-containing protein] -0.194 0.144
77 264684_at AT1G65590 ATHEX1, HEXO3, beta-hexosaminidase 3 -0.192 0.030
78 258590_at AT3G04280 ARR22, response regulator 22, RR22, response regulator 22 -0.192 0.080
79 265261_at AT2G42990 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.192 0.122
80 251469_at AT3G59530 LAP3, LESS ADHERENT POLLEN 3 -0.187 0.048
81 257698_at AT3G12730 [Homeodomain-like superfamily protein] -0.185 -0.093
82 261441_at AT1G28470 ANAC010, NAC domain containing protein 10, NAC010, NAC domain containing protein 10, SND3, SECONDARY WALL-ASSOCIATED NAC DOMAIN PROTEIN 3 -0.184 0.027
83 253902_at AT4G27170 AT2S4, SESA4, seed storage albumin 4 -0.182 0.030
84 250464_at AT5G10040 unknown -0.181 -0.423
85 265997_at AT2G24250 unknown -0.178 0.055
86 254294_at AT4G23070 ATRBL7, RHOMBOID-like protein 7, RBL7, RHOMBOID-like protein 7 -0.178 0.101
87 255741_at AT1G25410 ATIPT6, ARABIDOPSIS THALIANA ISOPENTENYLTRANSFERASE 6, IPT6, isopentenyltransferase 6 -0.174 0.069