4.0:Information of module
Glyphosate EC50
In comparison with mkk1/mkk2 control rep help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009165 nucleotide biosynthetic process BP 1.873e-10
GO:1901293 nucleoside phosphate biosynthetic proces... BP 1.873e-10
GO:0044281 small molecule metabolic process BP 4.470e-10
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0046777 protein autophosphorylation BP 2.559e-04
GO:0044272 sulfur compound biosynthetic process BP 8.731e-04
GO:0006766 vitamin metabolic process BP 1.923e-03
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Glyphosate EC50		 Log2 signal ratio
mkk1/mkk2 control rep
1 262679_at AT1G75830 LCR67, low-molecular-weight cysteine-rich 67, PDF1.1, PLANT DEFENSIN 1.1 0.705 -0.045
2 249784_at AT5G24280 GMI1, GAMMA-IRRADIATION AND MITOMYCIN C INDUCED 1 0.386 0.008
3 262518_at AT1G17170 ATGSTU24, glutathione S-transferase TAU 24, GST, Arabidopsis thaliana Glutathione S-transferase (class tau) 24, GSTU24, glutathione S-transferase TAU 24 0.371 0.511
4 254630_at AT4G18360 GOX3, glycolate oxidase 3 0.258 0.214
5 257644_at AT3G25780 AOC3, allene oxide cyclase 3 0.256 0.510
6 259120_at AT3G02240 GLV4, GOLVEN 4, RGF7, root meristem growth factor 7 0.236 0.049
7 266368_at AT2G41380 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.231 0.553
8 245624_at AT4G14090 [UDP-Glycosyltransferase superfamily protein] 0.228 -0.178
9 252131_at AT3G50930 BCS1, cytochrome BC1 synthesis 0.216 0.697
10 264400_at AT1G61800 ATGPT2, ARABIDOPSIS GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, GPT2, glucose-6-phosphate/phosphate translocator 2 0.209 0.409
11 256924_at AT3G29590 AT5MAT 0.202 0.039
12 246461_at AT5G16930 [AAA-type ATPase family protein] 0.202 -0.061
13 263039_at AT1G23280 [MAK16 protein-related] 0.196 -0.147
14 250062_at AT5G17760 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.190 0.639
15 249215_at AT5G42800 DFR, dihydroflavonol 4-reductase, M318, TT3 0.174 0.138
16 250252_at AT5G13750 ZIFL1, zinc induced facilitator-like 1 0.170 -0.011
17 247215_at AT5G64905 PROPEP3, elicitor peptide 3 precursor 0.166 0.366
18 249942_at AT5G22300 AtNIT4, NITRILASE 4, NIT4, nitrilase 4 0.162 0.068
19 266668_at AT2G29760 OTP81, ORGANELLE TRANSCRIPT PROCESSING 81 0.159 -0.034
20 252684_at AT3G44400 [Disease resistance protein (TIR-NBS-LRR class) family] 0.157 0.504
21 258396_at AT3G15460 [Ribosomal RNA processing Brix domain protein] 0.153 -0.270
22 249481_at AT5G38900 [Thioredoxin superfamily protein] 0.153 1.009
23 265188_at AT1G23800 ALDH2B, aldehyde dehydrogenase 2B, ALDH2B7, aldehyde dehydrogenase 2B7 0.148 0.093
24 254455_at AT4G21140 unknown 0.147 -0.004
25 256243_at AT3G12500 ATHCHIB, basic chitinase, B-CHI, CHI-B, HCHIB, basic chitinase, PR-3, PATHOGENESIS-RELATED 3, PR3, PATHOGENESIS-RELATED 3 0.139 0.795
26 266139_at AT2G28085 SAUR42, SMALL AUXIN UPREGULATED RNA 42 0.139 0.167
27 258202_at AT3G13940 [DNA binding] 0.139 0.185
28 251538_at AT3G58660 [Ribosomal protein L1p/L10e family] 0.134 0.033
29 259403_at AT1G17745 PGDH, 3-phosphoglycerate dehydrogenase, PGDH2, phosphoglycerate dehydrogenase 2 0.133 0.349
30 250309_at AT5G12220 [las1-like family protein] 0.131 -0.068
31 265032_at AT1G61580 ARP2, ARABIDOPSIS RIBOSOMAL PROTEIN 2, RPL3B, R-protein L3 B 0.130 0.021
32 260415_at AT1G69790 [Protein kinase superfamily protein] 0.130 0.082
33 264342_at AT1G12080 [Vacuolar calcium-binding protein-related] -0.285 -0.504
34 256266_at AT3G12320 LNK3, night light-inducible and clock-regulated 3 -0.244 -0.275
35 248073_at AT5G55720 [Pectin lyase-like superfamily protein] -0.214 0.019
36 246195_at AT4G36410 UBC17, ubiquitin-conjugating enzyme 17 -0.204 -0.059
37 261569_at AT1G01060 LHY, LATE ELONGATED HYPOCOTYL, LHY1, LATE ELONGATED HYPOCOTYL 1 -0.202 -0.189
38 251050_at AT5G02440 unknown -0.177 -0.126
39 256300_at AT1G69490 ANAC029, Arabidopsis NAC domain containing protein 29, ATNAP, NAC-LIKE, ACTIVATED BY AP3/PI, NAP, NAC-like, activated by AP3/PI -0.177 0.131
40 254954_at AT4G10910 unknown -0.175 0.039
41 262010_at AT1G35612 [expressed protein] -0.169 0.042
42 255511_at AT4G02075 PIT1, pitchoun 1 -0.167 -0.425
43 251976_at AT3G53240 AtRLP45, receptor like protein 45, RLP45, receptor like protein 45 -0.164 -0.048
44 262826_at AT1G13080 CYP71B2, cytochrome P450, family 71, subfamily B, polypeptide 2 -0.150 -0.331
45 260515_at AT1G51460 ABCG13, ATP-binding cassette G13 -0.148 0.189
46 251178_at AT3G63440 ATCKX6, CYTOKININ OXIDASE 6, ATCKX7, CKX6, cytokinin oxidase/dehydrogenase 6 -0.145 -0.063
47 253573_at AT4G31020 [alpha/beta-Hydrolases superfamily protein] -0.145 0.003
48 260603_at AT1G55960 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.143 -0.410
49 256958_at AT3G13430 [RING/U-box superfamily protein] -0.143 0.098
50 263019_at AT1G23870 ATTPS9, trehalose-phosphatase/synthase 9, TPS9, TREHALOSE -6-PHOSPHATASE SYNTHASE S9, TPS9, trehalose-phosphatase/synthase 9 -0.142 0.435
51 262582_at AT1G15410 [aspartate-glutamate racemase family] -0.139 -0.331
52 246540_at AT5G15600 SP1L4, SPIRAL1-like4 -0.139 -0.254
53 257221_at AT3G27920 ATGL1, ATMYB0, myb domain protein 0, GL1, GLABRA 1, MYB0, myb domain protein 0 -0.137 0.041
54 248911_at AT5G45830 ATDOG1, DOG1, DELAY OF GERMINATION 1, GAAS5, germination ability after storage 5, GSQ5, GLUCOSE SENSING QTL 5 -0.130 -0.253
55 267361_at AT2G39920 [HAD superfamily, subfamily IIIB acid phosphatase ] -0.129 -0.739
56 260498_at AT2G41710 [Integrase-type DNA-binding superfamily protein] -0.127 -0.017
57 259174_at AT3G03690 UNE7, unfertilized embryo sac 7 -0.125 -0.203
58 251592_at AT3G57670 NTT, NO TRANSMITTING TRACT, WIP2, WIP domain protein 2 -0.124 -0.037
59 260759_at AT1G49180 [protein kinase family protein] -0.123 0.006
60 248584_at AT5G49960 unknown -0.123 -0.182
61 259540_at AT1G20640 NLP4, NIN-like protein 4 -0.123 -0.187
62 256640_at AT3G32260 [Nucleic acid-binding proteins superfamily] -0.123 -0.088
63 265939_at AT2G19650 [Cysteine/Histidine-rich C1 domain family protein] -0.123 -0.213