4.0:Information of module
atmyc2 Seedling BL+ABA
In comparison with Col 1d help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0016144 S-glycoside biosynthetic process BP 2.199e-10
GO:0019758 glycosinolate biosynthetic process BP 2.199e-10
GO:0019761 glucosinolate biosynthetic process BP 2.199e-10
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010033 response to organic substance BP 1.630e-11
GO:1901700 response to oxygen-containing compound BP 7.392e-11
GO:0009611 response to wounding BP 3.568e-10
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
atmyc2 Seedling BL+ABA		 Log2 signal ratio
Col 1d
1 255437_at AT4G03060 AOP2, alkenyl hydroxalkyl producing 2 0.489 -0.250
2 266395_at AT2G43100 ATLEUD1, IPMI2, isopropylmalate isomerase 2 0.340 -0.046
3 251458_at AT3G60170 [copia-like retrotransposon family, has a 7.6e-229 P-value blast match to gb|AAO73527.1| gag-pol polyprotein (Glycine max) (SIRE1) (Ty1_Copia-family)] 0.304 0.068
4 254862_at AT4G12030 BASS5, BILE ACID:SODIUM SYMPORTER FAMILY PROTEIN 5, BAT5, bile acid transporter 5 0.299 -0.041
5 260745_at AT1G78370 ATGSTU20, glutathione S-transferase TAU 20, GSTU20, glutathione S-transferase TAU 20 0.293 0.030
6 254964_at AT4G11080 3xHMG-box1, 3xHigh Mobility Group-box1 0.275 0.006
7 265121_at AT1G62560 FMO GS-OX3, flavin-monooxygenase glucosinolate S-oxygenase 3 0.256 -0.136
8 259560_at AT1G21270 WAK2, wall-associated kinase 2 0.233 -0.183
9 260230_at AT1G74500 ATBS1, activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1, bHLH135, basic helix-loop-helix protein 135, BS1, activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1, PRE3, PACLOBUTRAZOL RESISTANCE 3, TMO7, TARGET OF MONOPTEROS 7 0.232 0.058
10 257853_at AT3G12960 SMP1, seed maturation protein 1 0.231 0.050
11 253977_at AT4G26630 [DEK domain-containing chromatin associated protein] 0.214 -0.007
12 258626_at AT3G04450 [Homeodomain-like superfamily protein] 0.214 -0.114
13 248070_at AT5G55660 [DEK domain-containing chromatin associated protein] 0.212 -0.021
14 254255_at AT4G23220 CRK14, cysteine-rich RLK (RECEPTOR-like protein kinase) 14 0.206 0.202
15 257978_at AT3G20860 ATNEK5, NIMA-related kinase 5, NEK5, NIMA-related kinase 5 0.202 0.261
16 252534_at AT3G46130 ATMYB48, myb domain protein 48, ATMYB48-1, ATMYB48-2, ATMYB48-3, MYB48, myb domain protein 48 0.196 -0.283
17 264454_at AT1G10320 [Zinc finger C-x8-C-x5-C-x3-H type family protein] 0.183 -0.095
18 248291_at AT5G53020 [Ribonuclease P protein subunit P38-related] 0.169 -0.273
19 250955_at AT5G03190 CPUORF47, conserved peptide upstream open reading frame 47 0.167 -0.029
20 245618_at AT4G14510 ATCFM3B, CFM3B, CRM family member 3B 0.167 -0.095
21 263677_at AT1G04520 PDLP2, plasmodesmata-located protein 2 0.153 0.024
22 263007_at AT1G54260 [winged-helix DNA-binding transcription factor family protein] 0.150 -0.099
23 245343_at AT4G15830 [ARM repeat superfamily protein] 0.148 -0.037
24 247004_at AT5G67570 DG1, DELAYED GREENING 1, EMB1408, embryo defective 1408, EMB246, EMBRYO DEFECTIVE 246 0.147 -0.070
25 260225_at AT1G74590 ATGSTU10, GLUTATHIONE S-TRANSFERASE TAU 10, GSTU10, glutathione S-transferase TAU 10 0.146 -0.032
26 256243_at AT3G12500 ATHCHIB, basic chitinase, B-CHI, CHI-B, HCHIB, basic chitinase, PR-3, PATHOGENESIS-RELATED 3, PR3, PATHOGENESIS-RELATED 3 0.146 -0.041
27 266727_at AT2G03150 emb1579, embryo defective 1579 0.144 -0.013
28 247352_at AT5G63650 SNRK2-5, SNRK2.5, SNF1-related protein kinase 2.5, SRK2H, SNF1-RELATED PROTEIN KINASE 2H 0.144 0.009
29 251829_at AT3G55020 [Ypt/Rab-GAP domain of gyp1p superfamily protein] 0.141 0.045
30 258322_at AT3G22740 HMT3, homocysteine S-methyltransferase 3 0.141 0.323
31 251466_at AT3G59340 unknown 0.139 0.091
32 245725_at AT1G73370 ATSUS6, ARABIDOPSIS THALIANA SUCROSE SYNTHASE 6, SUS6, sucrose synthase 6 0.135 0.149
33 257134_at AT3G12870 unknown 0.134 0.043
34 263696_at AT1G31230 AK-HSDH, ASPARTATE KINASE-HOMOSERINE DEHYDROGENASE, AK-HSDH I, aspartate kinase-homoserine dehydrogenase i 0.133 -0.033
35 262646_at AT1G62800 ASP4, aspartate aminotransferase 4 0.133 0.010
36 247883_at AT5G57790 unknown 0.133 0.024
37 258920_at AT3G10520 AHB2, haemoglobin 2, ARATH GLB2, ATGLB2, ARABIDOPSIS HEMOGLOBIN 2, GLB2, HEMOGLOBIN 2, HB2, haemoglobin 2, NSHB2, NON-SYMBIOTIC HAEMOGLOBIN 2 0.129 0.055
38 248938_at AT5G45780 [Leucine-rich repeat protein kinase family protein] 0.129 -0.055
39 266754_at AT2G46980 ASY3, ASYNAPTIC 3, AtASY3, Arabidopsis thaliana ASYNAPTIC 3 0.128 0.024
40 252870_at AT4G39940 AKN2, APS-kinase 2, APK2, ADENOSINE-5'-PHOSPHOSULFATE (APS) KINASE 2 0.127 -0.026
41 265957_at AT2G37300 ABCI16, ATP-binding cassette I16 0.125 0.043
42 262177_at AT1G74710 ATICS1, ARABIDOPSIS ISOCHORISMATE SYNTHASE 1, EDS16, ENHANCED DISEASE SUSCEPTIBILITY TO ERYSIPHE ORONTII 16, ICS1, ISOCHORISMATE SYNTHASE 1, SID2, SALICYLIC ACID INDUCTION DEFICIENT 2 0.124 -0.054
43 246898_at AT5G25580 unknown 0.122 0.064
44 248082_at AT5G55400 [Actin binding Calponin homology (CH) domain-containing protein] 0.121 0.174
45 252373_at AT3G48090 ATEDS1, EDS1, enhanced disease susceptibility 1 0.120 -0.121
46 255904_at AT1G17860 [Kunitz family trypsin and protease inhibitor protein] 0.120 0.025
47 247046_at AT5G66540 unknown 0.119 0.097
48 249362_at AT5G40550 AtSGF29b, SGF29b, SaGa associated Factor 29 b 0.119 -0.151
49 264271_at AT1G60270 BGLU6, beta glucosidase 6 0.118 0.110
50 264078_at AT2G28470 BGAL8, beta-galactosidase 8 0.118 -0.035
51 263714_at AT2G20610 ALF1, ABERRANT LATERAL ROOT FORMATION 1, HLS3, HOOKLESS 3, RTY, ROOTY, RTY1, ROOTY 1, SUR1, SUPERROOT 1 0.118 -0.065
52 262006_at AT1G64570 DUO3, DUO POLLEN 3 0.117 -0.078
53 263202_at AT1G05630 5PTASE13, inositol-polyphosphate 5-phosphatase 13, AT5PTASE13, Arabidopsis thaliana inositol-polyphosphate 5-phosphatase 13 0.114 -0.038
54 263909_at AT2G36490 AtROS1, DML1, demeter-like 1, ROS1, REPRESSOR OF SILENCING1 0.114 -0.051
55 262847_at AT1G14840 ATMAP70-4, microtubule-associated proteins 70-4, MAP70-4, microtubule-associated proteins 70-4 0.109 -0.036
56 255480_at AT4G02485 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.108 -0.106
57 252432_at AT3G47680 [DNA binding] 0.107 -0.087
58 250501_at AT5G09640 SCPL19, serine carboxypeptidase-like 19, SNG2, SINAPOYLGLUCOSE ACCUMULATOR 2 0.107 0.121
59 257547_at AT3G13000 unknown 0.106 -0.065
60 249231_at AT5G42030 ABIL4, ABL interactor-like protein 4 0.105 -0.005
61 256170_at AT1G51790 [Leucine-rich repeat protein kinase family protein] 0.104 0.177
62 261133_at AT1G19715 [Mannose-binding lectin superfamily protein] 0.104 0.053
63 249144_at AT5G43270 SPL2, squamosa promoter binding protein-like 2 0.103 -0.245
64 256527_at AT1G66100 [Plant thionin] -1.054 0.253
65 261713_at AT1G32640 ATMYC2, JAI1, JASMONATE INSENSITIVE 1, JIN1, JASMONATE INSENSITIVE 1, MYC2, RD22BP1, ZBF1 -0.892 -0.022
66 259866_at AT1G76640 CML39, CALMODULIN LIKE 39 -0.519 0.573
67 249971_at AT5G19110 [Eukaryotic aspartyl protease family protein] -0.477 0.192
68 262325_at AT1G64160 AtDIR5, DIR5, dirigent protein 5 -0.398 0.098
69 253684_at AT4G29690 [Alkaline-phosphatase-like family protein] -0.397 0.034
70 249071_at AT5G44050 [MATE efflux family protein] -0.389 0.286
71 256159_at AT1G30135 JAZ8, jasmonate-zim-domain protein 8, TIFY5A -0.379 0.596
72 266658_at AT2G25735 unknown -0.344 0.193
73 264647_at AT1G09090 ATRBOHB, respiratory burst oxidase homolog B, ATRBOHB-BETA, RBOHB, respiratory burst oxidase homolog B -0.310 0.034
74 266821_at AT2G44840 ATERF13, ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13, EREBP, ERF13, ethylene-responsive element binding factor 13 -0.307 0.365
75 247478_at AT5G62360 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.290 0.943
76 251770_at AT3G55970 ATJRG21, JRG21, jasmonate-regulated gene 21 -0.286 0.344
77 245422_at AT4G17470 [alpha/beta-Hydrolases superfamily protein] -0.275 0.089
78 263851_at AT2G04460 unknown -0.268 0.086
79 262857_at AT1G14930 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.261 0.041
80 259935_at AT1G71250 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.247 0.048
81 251428_at AT3G60140 BGLU30, BETA GLUCOSIDASE 30, DIN2, DARK INDUCIBLE 2, SRG2, SENESCENCE-RELATED GENE 2 -0.239 0.106
82 267177_at AT2G37580 [RING/U-box superfamily protein] -0.236 -0.031
83 254889_at AT4G11650 ATOSM34, osmotin 34, OSM34, osmotin 34 -0.236 -0.012
84 261215_at AT1G32970 [Subtilisin-like serine endopeptidase family protein] -0.226 0.007
85 248395_at AT5G52120 AtPP2-A14, phloem protein 2-A14, PP2-A14, phloem protein 2-A14 -0.220 0.061
86 266800_at AT2G22880 [VQ motif-containing protein] -0.216 0.536
87 252200_at AT3G50280 [HXXXD-type acyl-transferase family protein] -0.215 0.120
88 257333_at ATMG01360 COX1, cytochrome oxidase -0.213 0.382
89 260890_at AT1G29090 [Cysteine proteinases superfamily protein] -0.210 0.063
90 262630_at AT1G06520 ATGPAT1, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 1, GPAT1, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 1, sn-2-GPAT1, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 1 -0.209 0.348
91 246620_at AT5G36220 CYP81D1, cytochrome P450, family 81, subfamily D, polypeptide 1, CYP91A1, CYTOCHROME P450 91A1 -0.208 0.020
92 250680_at AT5G06570 [alpha/beta-Hydrolases superfamily protein] -0.208 0.577
93 257337_at ATMG00060 NAD5, NADH DEHYDROGENASE SUBUNIT 5, NAD5.3, NADH DEHYDROGENASE SUBUNIT 5.3, NAD5C, NADH dehydrogenase subunit 5C -0.204 0.089
94 247953_at AT5G57260 CYP71B10, cytochrome P450, family 71, subfamily B, polypeptide 10 -0.202 -0.005
95 251774_at AT3G55840 [Hs1pro-1 protein] -0.198 0.757
96 257321_at ATMG01130 ORF106F -0.197 0.128
97 244901_at ATMG00640 ORF25 -0.197 0.092
98 256712_at AT2G34020 [Calcium-binding EF-hand family protein] -0.197 0.048
99 244943_at ATMG00070 NAD9, NADH dehydrogenase subunit 9 -0.189 0.112
100 253827_at AT4G28085 unknown -0.189 0.497
101 250662_at AT5G07010 ATST2A, ARABIDOPSIS THALIANA SULFOTRANSFERASE 2A, ST2A, sulfotransferase 2A -0.186 0.200
102 246270_at AT4G36500 unknown -0.185 0.151
103 245440_at AT4G16680 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.185 0.066
104 251420_at AT3G60490 [Integrase-type DNA-binding superfamily protein] -0.181 0.081
105 245504_at AT4G15660 [Thioredoxin superfamily protein] -0.180 0.311
106 249252_at AT5G42010 [Transducin/WD40 repeat-like superfamily protein] -0.177 0.098
107 258610_at AT3G02875 ILR1, IAA-LEUCINE RESISTANT 1 -0.175 0.067
108 254543_at AT4G19810 ChiC, class V chitinase -0.170 0.137
109 264777_at AT1G08630 THA1, threonine aldolase 1 -0.170 -0.031
110 252415_at AT3G47340 ASN1, glutamine-dependent asparagine synthase 1, AT-ASN1, ARABIDOPSIS THALIANA GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1, DIN6, DARK INDUCIBLE 6 -0.170 -0.047
111 257369_at AT2G35550 ATBPC7, BASIC PENTACYSTEINE 7, BBR, BPC7, basic pentacysteine 7 -0.167 -0.137
112 248563_at AT5G49690 [UDP-Glycosyltransferase superfamily protein] -0.164 0.050
113 258395_at AT3G15500 ANAC055, NAC domain containing protein 55, ATNAC3, NAC domain containing protein 3, NAC055, NAC domain containing protein 55, NAC3, NAC domain containing protein 3 -0.164 0.242
114 245041_at AT2G26530 AR781 -0.163 0.107
115 244945_at ATMG00110 ABCI2, ATP-binding cassette I2, CCB206, cytochrome C biogenesis 206 -0.159 -0.002
116 253047_at AT4G37295 unknown -0.156 0.196
117 261350_at AT1G79770 unknown -0.156 0.101
118 245000_at ATCG00210 YCF6 -0.153 0.115
119 257322_at ATMG01180 ORF111B -0.153 -0.011
120 248236_at AT5G53870 AtENODL1, ENODL1, early nodulin-like protein 1 -0.153 0.073
121 246000_at AT5G20820 SAUR76, SMALL AUXIN UPREGULATED RNA 76 -0.150 0.034
122 257274_at AT3G14510 [Polyprenyl synthetase family protein] -0.145 0.060
123 262354_at AT1G64200 VHA-E3, vacuolar H+-ATPase subunit E isoform 3 -0.137 0.053
124 265057_at AT1G52140 unknown -0.135 0.145
125 264704_at AT1G70090 GATL9, GALACTURONOSYLTRANSFERASE-LIKE 9, LGT8, glucosyl transferase family 8 -0.133 0.327