4.0:Information of module
atmyc2 Seedling BL
In comparison with Sha-3h IAA help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0016926 protein desumoylation BP 1.694e-03
GO:0016071 mRNA metabolic process BP 4.453e-03
GO:0016556 mRNA modification BP 7.143e-03
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006302 double-strand break repair BP 6.997e-04
GO:0050896 response to stimulus BP 4.589e-03
GO:0010200 response to chitin BP 5.340e-03
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
atmyc2 Seedling BL		 Log2 signal ratio
Sha-3h IAA
1 249904_at AT5G22700 [F-box/RNI-like/FBD-like domains-containing protein] 0.162 0.047
2 253835_at AT4G27820 BGLU9, beta glucosidase 9 0.161 0.083
3 259796_at AT1G64270 [Mutator-like transposase family, has a 1.0e-06 P-value blast match to GB:AAA21566 mudrA of transposon=MuDR (MuDr-element) (Zea mays)] 0.139 -0.033
4 265902_at AT2G25590 [Plant Tudor-like protein] 0.134 0.057
5 248900_at AT5G46400 AT PRP39-2, PRP39-2 0.132 0.065
6 252820_at AT3G42640 AHA8, H(+)-ATPase 8, HA8, H(+)-ATPase 8 0.129 0.081
7 247696_at AT5G59780 ATMYB59, MYB DOMAIN PROTEIN 59, ATMYB59-1, ATMYB59-2, ATMYB59-3, MYB59, myb domain protein 59 0.110 0.005
8 265545_at AT2G28250 NCRK 0.109 -0.017
9 247170_at AT5G65530 [Protein kinase superfamily protein] 0.109 0.095
10 263192_at AT1G36160 ACC1, acetyl-CoA carboxylase 1, AT-ACC1, EMB22, EMBRYO DEFECTIVE 22, GK, GURKE, GSD1, GLOSSYHEAD 1, PAS3, PASTICCINO 3, SFR3, SENSITIVE TO FREEZING 3 0.090 -0.005
11 259183_at AT3G01580 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.082 0.011
12 261713_at AT1G32640 ATMYC2, JAI1, JASMONATE INSENSITIVE 1, JIN1, JASMONATE INSENSITIVE 1, MYC2, RD22BP1, ZBF1 -1.006 -0.061
13 257735_at AT3G27400 [Pectin lyase-like superfamily protein] -0.178 -0.012
14 245556_at AT4G15400 ABS1, ABNORMAL SHOOT 1, BIA1, BRASSINOSTEROID INACTIVATOR1 -0.166 0.075
15 250267_at AT5G12930 unknown -0.142 -0.003
16 267222_at AT2G43880 [Pectin lyase-like superfamily protein] -0.142 -0.208
17 265553_at AT2G07550 [copia-like retrotransposon family, has a 4.7e-313 P-value blast match to GB:CAA31653 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)] -0.131 -0.040
18 248660_at AT5G48650 [Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain] -0.129 0.005
19 263822_at AT2G40240 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.125 0.015
20 254001_at AT4G26260 MIOX4, myo-inositol oxygenase 4 -0.110 -0.032
21 253036_at AT4G38340 NLP3, NIN-like protein 3 -0.104 -0.266