4.0:Information of module
chl1-5 untreated
In comparison with bri1-116 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:1903046 meiotic cell cycle process BP 1.079e-02
GO:0008299 isoprenoid biosynthetic process BP 2.246e-02
GO:0006720 isoprenoid metabolic process BP 2.770e-02
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0052546 cell wall pectin metabolic process BP 1.111e-03
GO:0010393 galacturonan metabolic process BP 1.990e-03
GO:0045488 pectin metabolic process BP 1.990e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
chl1-5 untreated		 Log2 signal ratio
bri1-116
1 256940_at AT3G30720 QQS, QUA-QUINE STARCH 0.486 0.007
2 267439_at AT2G19060 [SGNH hydrolase-type esterase superfamily protein] 0.130 0.140
3 263817_at AT2G10070 unknown 0.128 0.035
4 258571_at AT3G04420 anac048, NAC domain containing protein 48, NAC048, NAC domain containing protein 48 0.120 0.090
5 247998_at AT5G56200 [C2H2 type zinc finger transcription factor family] 0.108 0.116
6 267430_at AT2G34860 EDA3, embryo sac development arrest 3 0.105 0.173
7 254514_at AT4G20250 unknown 0.100 0.059
8 252072_at AT3G51710 [D-mannose binding lectin protein with Apple-like carbohydrate-binding domain] 0.095 0.004
9 266568_at AT2G24070 QWRF4, QWRF domain containing 4 0.093 -0.029
10 245582_at AT4G14850 LOI1, lovastatin insensitive 1, MEF11, mitochondrial RNA editing factor 11 0.089 0.085
11 266249_at AT2G27630 [Ubiquitin carboxyl-terminal hydrolase-related protein] 0.088 0.038
12 246256_at AT4G36770 [UDP-Glycosyltransferase superfamily protein] 0.087 0.016
13 253883_at AT4G27660 unknown 0.086 0.064
14 252732_at AT3G43140 transposable element gene 0.085 0.082
15 246435_at AT5G17460 unknown 0.080 0.114
16 258566_at AT3G04110 ATGLR1.1, GLR1, GLUTAMATE RECEPTOR 1, GLR1.1, glutamate receptor 1.1 0.080 -0.079
17 251008_at AT5G02710 unknown 0.079 0.192
18 246916_at AT5G25910 AtRLP52, receptor like protein 52, RLP52, receptor like protein 52 0.076 -0.000
19 256487_at AT1G31540 [Disease resistance protein (TIR-NBS-LRR class) family] 0.075 0.053
20 257282_at AT3G29732 [CACTA-like transposase family (Tnp2/En/Spm), has a 9.9e-152 P-value blast match to GB:CAA40555 TNP2 (CACTA-element) (Antirrhinum majus)] 0.074 -0.040
21 262475_at AT1G50340 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.073 0.053
22 249379_at AT5G40460 unknown 0.073 0.020
23 261803_at AT1G30500 NF-YA7, nuclear factor Y, subunit A7 0.072 0.103
24 252898_at AT4G39500 CYP96A11, cytochrome P450, family 96, subfamily A, polypeptide 11 0.071 -0.015
25 257426_at AT1G54850 [HSP20-like chaperones superfamily protein] 0.070 0.056
26 264392_at AT1G11900 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.070 0.140
27 249365_at AT5G40600 unknown 0.069 0.076
28 260470_at AT1G11125 unknown 0.068 0.013
29 267131_at AT2G23400 [Undecaprenyl pyrophosphate synthetase family protein] 0.068 0.015
30 245107_at AT2G41690 AT-HSFB3, heat shock transcription factor B3, HSFB3, HEAT SHOCK TRANSCRIPTION FACTOR B3, HSFB3, heat shock transcription factor B3 0.067 0.006
31 251652_at AT3G57380 [Glycosyltransferase family 61 protein] 0.067 -0.180
32 259411_at AT1G13410 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.067 0.013
33 264827_at AT1G03390 [HXXXD-type acyl-transferase family protein] 0.066 0.113
34 258292_at AT3G23330 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.065 0.025
35 264571_at AT1G05330 unknown 0.065 0.101
36 260562_at AT2G43850 [Integrin-linked protein kinase family] 0.064 0.005
37 259981_at AT1G76450 [Photosystem II reaction center PsbP family protein] 0.064 0.246
38 264603_at AT1G04670 unknown 0.063 0.046
39 258547_at AT3G06895 unknown 0.063 0.042
40 263991_at AT2G13020 [gypsy-like retrotransposon family (Athila), has a 7.3e-101 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)] 0.062 0.008
41 247242_at AT5G64690 [neurofilament triplet H protein-related] 0.061 -0.003
42 252556_at AT3G45950 [Pre-mRNA splicing Prp18-interacting factor] 0.060 -0.071
43 245591_at AT4G14530 unknown 0.059 0.048
44 256081_at AT1G20700 ATWOX14, WUSCHEL RELATED HOMEOBOX 14, WOX14, WUSCHEL related homeobox 14 0.059 -0.019
45 265515_at AT2G06120 unknown 0.059 0.063
46 263007_at AT1G54260 [winged-helix DNA-binding transcription factor family protein] 0.058 0.012
47 255414_at AT4G03156 [small GTPase-related] 0.058 0.034
48 252660_at AT3G44440 unknown 0.056 0.096
49 261766_at AT1G15580 ATAUX2-27, AUX2-27, AUXIN-INDUCIBLE 2-27, IAA5, indole-3-acetic acid inducible 5 0.056 -0.497
50 260591_at AT1G53325 [F-box associated ubiquitination effector family protein] 0.055 0.028
51 255148_at AT4G08470 MAPKKK10, MEKK3, MAPK/ERK kinase kinase 3 0.054 0.020
52 249530_at AT5G38750 [asparaginyl-tRNA synthetase family] 0.054 0.083
53 255916_at AT5G28550 unknown 0.054 0.059
54 264258_at AT1G09220 [Pentatricopeptide repeat (PPR) superfamily protein] 0.053 0.087
55 264348_at AT1G12110 AtNPF6.3, ATNRT1, ARABIDOPSIS THALIANA NITRATE TRANSPORTER 1, B-1, CHL1, CHLORINA 1, CHL1-1, NPF6.3, NRT1/ PTR family 6.3, NRT1, NITRATE TRANSPORTER 1, NRT1.1, nitrate transporter 1.1 -1.207 -0.141
56 264371_at AT1G12090 ELP, extensin-like protein -1.102 -0.137
57 262753_at AT1G16340 ATKDSA2, ATKSDA -0.629 0.218
58 265536_at AT2G15880 [Leucine-rich repeat (LRR) family protein] -0.119 0.181
59 248989_at AT5G45200 [Disease resistance protein (TIR-NBS-LRR class) family] -0.104 0.069
60 256108_at AT1G16940 [F-box/RNI-like/FBD-like domains-containing protein] -0.103 0.121
61 267171_at AT2G37590 ATDOF2.4, DOF2.4, DNA binding with one finger 2.4 -0.102 0.032
62 263045_at AT2G05370 unknown -0.101 -0.040
63 262266_at AT1G42450 [Mutator-like transposase family, has a 4.3e-96 P-value blast match to Q9SHN7 /450-633 Pfam PF03108 MuDR family transposase (MuDr-element domain)] -0.099 0.085
64 254470_at AT4G20490 [gypsy-like retrotransposon family, has a 1.5e-29 P-value blast match to GB:AAD11615 prpol (gypsy_Ty3-element) (Zea mays)] -0.094 0.088
65 257035_at AT3G19270 CYP707A4, cytochrome P450, family 707, subfamily A, polypeptide 4 -0.093 -0.017
66 258596_at AT3G04510 LSH2, LIGHT SENSITIVE HYPOCOTYLS 2 -0.092 0.030
67 258732_at AT3G05820 A/N-InvH, alkaline/neutral invertase H, At-A/N-InvH, Arabidopsis alkaline/neutral invertase H, INVH, invertase H -0.092 0.102
68 264352_at AT1G03270 unknown -0.091 0.087
69 260513_at AT1G51490 BGLU36, beta glucosidase 36 -0.091 0.087
70 249559_at AT5G38320 unknown -0.090 0.212
71 251166_at AT3G63350 AT-HSFA7B, HSFA7B, HEAT SHOCK TRANSCRIPTION FACTOR A7B -0.089 -0.057
72 250176_at AT5G14400 CYP724A1, cytochrome P450, family 724, subfamily A, polypeptide 1 -0.089 0.075
73 248260_at AT5G53240 unknown -0.088 0.112
74 257365_x_at AT2G26020 PDF1.2b, plant defensin 1.2b -0.088 0.111
75 255949_at AT1G22080 [Cysteine proteinases superfamily protein] -0.087 0.076
76 257223_at AT3G27840 RPL12-B, ribosomal protein L12-B -0.085 0.057
77 252720_at AT3G43970 unknown -0.085 0.021
78 252753_at AT3G43500 unknown -0.085 0.023
79 256447_at AT1G33440 AtNPF4.4, NPF4.4, NRT1/ PTR family 4.4 -0.084 0.202
80 263849_at AT2G04490 [copia-like retrotransposon family, has a 0. P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea)] -0.084 0.083
81 249715_at AT5G35760 [Beta-galactosidase related protein] -0.084 0.001
82 249041_at AT5G44330 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.083 0.082
83 249805_at AT5G23800 unknown -0.082 -0.016
84 246086_at AT5G20560 [Glycosyl hydrolase superfamily protein] -0.082 -0.020
85 246377_at AT1G57550 [Low temperature and salt responsive protein family] -0.081 0.021
86 252747_at AT3G43320 unknown -0.081 0.095
87 257284_at AT3G29650 [CACTA-like transposase family (Tnp1/En/Spm), has a 5.1e-81 P-value blast match to ref|NP_189784.1| TNP1-related protein (Arabidopsis thaliana) (CACTA-element)] -0.080 0.065
88 263809_at AT2G04570 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.080 -0.402
89 252257_at AT3G49440 [F-box associated ubiquitination effector family protein] -0.079 0.082
90 260649_at AT1G08080 ACA7, alpha carbonic anhydrase 7, ATACA7, A. THALIANA ALPHA CARBONIC ANHYDRASE 7 -0.079 0.101
91 252129_at AT3G50890 AtHB28, homeobox protein 28, HB28, homeobox protein 28, ZHD7, ZINC FINGER HOMEODOMAIN 7 -0.079 -0.021
92 249500_at AT5G39260 ATEXP21, ATEXPA21, expansin A21, ATHEXP ALPHA 1.20, EXP21, EXPANSIN 21, EXPA21, expansin A21 -0.078 0.048
93 254212_at AT4G23580 [Galactose oxidase/kelch repeat superfamily protein] -0.078 0.117
94 252494_at AT3G46760 LecRK-S.3, L-type lectin receptor kinase S.3 -0.078 0.034
95 266879_at AT2G44590 ADL1D, DYNAMIN-like 1D, DL1D, DYNAMIN-like 1D -0.078 0.080
96 258577_at AT3G04220 [Disease resistance protein (TIR-NBS-LRR class) family] -0.078 -0.007
97 247941_at AT5G57200 [ENTH/ANTH/VHS superfamily protein] -0.077 0.011
98 257778_at AT3G29220 unknown -0.077 0.151
99 247857_at AT5G58400 [Peroxidase superfamily protein] -0.076 0.070
100 264363_at AT1G03170 FAF2, FANTASTIC FOUR 2, FTM5, FLORAL TRANSITION AT THE MERISTEM5 -0.076 -0.035
101 257501_at AT1G35380 [retrotransposon family] -0.076 -0.012
102 266499_at AT2G06980 [pseudogene] -0.076 -0.033
103 257737_at AT3G27440 UKL5, uridine kinase-like 5 -0.076 0.157
104 262554_at AT1G31380 [TRAF-like family protein] -0.075 0.014
105 265781_at AT2G07430 [gypsy-like retrotransposon family (Athila), has a 4.0e-125 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)] -0.075 0.063
106 260204_at AT1G52900 [Toll-Interleukin-Resistance (TIR) domain family protein] -0.075 0.031
107 259707_at AT1G77490 TAPX, thylakoidal ascorbate peroxidase -0.074 0.244