4.0:Information of module
Shoot Selenate
In comparison with cry1 low light help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0042221 response to chemical BP 1.186e-08
GO:0050896 response to stimulus BP 2.413e-07
GO:0046482 para-aminobenzoic acid metabolic process BP 2.699e-07
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0051239 regulation of multicellular organismal p... BP 3.267e-06
GO:2000026 regulation of multicellular organismal d... BP 4.271e-06
GO:0050793 regulation of developmental process BP 1.276e-05
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Shoot Selenate		 Log2 signal ratio
cry1 low light
1 267389_at AT2G44460 BGLU28, beta glucosidase 28 0.603 -0.173
2 263231_at AT1G05680 UGT74E2, Uridine diphosphate glycosyltransferase 74E2 0.533 0.022
3 252269_at AT3G49580 LSU1, RESPONSE TO LOW SULFUR 1 0.533 -0.169
4 246302_at AT3G51860 ATCAX3, ATHCX1, CAX1-LIKE, CAX3, cation exchanger 3 0.512 -0.174
5 262128_at AT1G52690 LEA7, LATE EMBRYOGENESIS ABUNDANT 7 0.506 0.407
6 247800_at AT5G58570 unknown 0.500 -0.117
7 256459_at AT1G36180 ACC2, acetyl-CoA carboxylase 2 0.487 -0.137
8 267168_at AT2G37770 AKR4C9, Aldo-keto reductase family 4 member C9, ChlAKR, Chloroplastic aldo-keto reductase 0.482 -0.186
9 259507_at AT1G43910 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.469 -0.211
10 255795_at AT2G33380 AtCLO3, Arabidopsis thaliana caleosin 3, CLO-3, caleosin 3, CLO3, caleosin 3, RD20, RESPONSIVE TO DESSICATION 20 0.439 0.083
11 263515_at AT2G21640 unknown 0.438 -0.122
12 259968_at AT1G76530 [Auxin efflux carrier family protein] 0.389 -0.011
13 251677_at AT3G56980 BHLH039, bHLH39, basic helix-loop-helix 39, ORG3, OBP3-RESPONSIVE GENE 3 0.385 -0.005
14 265170_at AT1G23730 ATBCA3, BETA CARBONIC ANHYDRASE 3, BCA3, beta carbonic anhydrase 3 0.371 -0.142
15 265837_at AT2G14560 LURP1, LATE UPREGULATED IN RESPONSE TO HYALOPERONOSPORA PARASITICA 0.363 -0.359
16 259058_at AT3G03470 CYP89A9, cytochrome P450, family 87, subfamily A, polypeptide 9 0.356 -0.077
17 258879_at AT3G03270 [Adenine nucleotide alpha hydrolases-like superfamily protein] 0.354 -0.110
18 260522_x_at AT2G41730 unknown 0.350 -0.131
19 259133_at AT3G05400 [Major facilitator superfamily protein] 0.340 -0.215
20 264953_at AT1G77120 ADH, ALCOHOL DEHYDROGENASE, ADH1, alcohol dehydrogenase 1, ATADH, ARABIDOPSIS THALIANA ALCOHOL DEHYDROGENASE, ATADH1 0.338 -0.202
21 265499_at AT2G15480 UGT73B5, UDP-glucosyl transferase 73B5 0.333 -0.107
22 258815_at AT3G04000 [NAD(P)-binding Rossmann-fold superfamily protein] 0.332 -0.054
23 249784_at AT5G24280 GMI1, GAMMA-IRRADIATION AND MITOMYCIN C INDUCED 1 0.322 -0.040
24 248260_at AT5G53240 unknown 0.317 -0.007
25 249384_at AT5G39890 unknown 0.313 -0.149
26 264148_at AT1G02220 ANAC003, NAC domain containing protein 3, NAC003, NAC domain containing protein 3 0.304 -0.227
27 266462_at AT2G47770 ATTSPO, TSPO(outer membrane tryptophan-rich sensory protein)-related, TSPO, TSPO(outer membrane tryptophan-rich sensory protein)-related 0.302 0.207
28 255250_at AT4G05100 AtMYB74, myb domain protein 74, MYB74, myb domain protein 74 0.302 0.014
29 252117_at AT3G51430 SSL5, STRICTOSIDINE SYNTHASE-LIKE 5, YLS2, YELLOW-LEAF-SPECIFIC GENE 2 0.295 -0.085
30 250062_at AT5G17760 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.290 -0.213
31 256252_at AT3G11340 UGT76B1, UDP-dependent glycosyltransferase 76B1 0.287 -0.007
32 253416_at AT4G33070 AtPDC1, PDC1, pyruvate decarboxylase 1 0.281 -0.285
33 250515_at AT5G09570 [Cox19-like CHCH family protein] 0.278 -0.084
34 257421_at AT1G12030 unknown 0.278 -0.065
35 244945_at ATMG00110 ABCI2, ATP-binding cassette I2, CCB206, cytochrome C biogenesis 206 0.277 0.039
36 248970_at AT5G45380 ATDUR3, DUR3, DEGRADATION OF UREA 3 0.275 -0.019
37 244906_at ATMG00690 ORF240A 0.275 -0.035
38 262940_at AT1G79520 [Cation efflux family protein] 0.261 0.079
39 255723_at AT3G29575 AFP3, ABI five binding protein 3 0.260 0.094
40 255259_at AT4G05020 NDB2, NAD(P)H dehydrogenase B2 0.251 -0.014
41 260410_at AT1G69870 AtNPF2.13, NPF2.13, NRT1/ PTR family 2.13, NRT1.7, nitrate transporter 1.7 0.246 -0.057
42 264907_at AT2G17280 [Phosphoglycerate mutase family protein] 0.243 -0.012
43 249377_at AT5G40690 unknown 0.234 -0.041
44 258452_at AT3G22370 AOX1A, alternative oxidase 1A, ATAOX1A, AtHSR3, HSR3, hyper-sensitivity-related 3 0.229 -0.012
45 258982_at AT3G08870 LecRK-VI.1, L-type lectin receptor kinase VI.1 0.229 -0.138
46 249082_at AT5G44120 ATCRA1, CRUCIFERINA, CRA1, CRUCIFERINA, CRU1 -0.684 0.578
47 266222_at AT2G28780 unknown -0.635 0.025
48 260716_at AT1G48130 ATPER1, 1-cysteine peroxiredoxin 1, PER1, 1-cysteine peroxiredoxin 1 -0.508 0.306
49 261021_at AT1G26380 [FAD-binding Berberine family protein] -0.414 -0.004
50 252374_at AT3G48100 ARR5, response regulator 5, ATRR2, ARABIDOPSIS THALIANA RESPONSE REGULATOR 2, IBC6, INDUCED BY CYTOKININ 6, RR5, response regulator 5 -0.403 0.142
51 266989_at AT2G39330 JAL23, jacalin-related lectin 23 -0.388 -0.055
52 267595_at AT2G32990 AtGH9B8, glycosyl hydrolase 9B8, GH9B8, glycosyl hydrolase 9B8 -0.331 0.003
53 250100_at AT5G16570 GLN1;4, glutamine synthetase 1;4 -0.291 0.022
54 245088_at AT2G39850 [Subtilisin-like serine endopeptidase family protein] -0.287 0.141
55 259520_at AT1G12320 unknown -0.286 0.086
56 249046_at AT5G44400 [FAD-binding Berberine family protein] -0.277 -0.041
57 256537_at AT1G33340 [ENTH/ANTH/VHS superfamily protein] -0.268 0.061
58 249337_at AT5G41080 AtGDPD2, GDPD2, glycerophosphodiester phosphodiesterase 2 -0.267 -0.009
59 261574_at AT1G01190 CYP78A8, cytochrome P450, family 78, subfamily A, polypeptide 8 -0.265 0.059
60 258338_at AT3G16150 ASPGB1, asparaginase B1 -0.250 0.011
61 252612_at AT3G45160 [Putative membrane lipoprotein] -0.248 0.057
62 260851_at AT1G21890 UMAMIT19, Usually multiple acids move in and out Transporters 19 -0.247 0.090
63 246415_at AT5G17160 unknown -0.245 0.017
64 267094_at AT2G38080 ATLMCO4, ARABIDOPSIS LACCASE-LIKE MULTICOPPER OXIDASE 4, IRX12, IRREGULAR XYLEM 12, LAC4, LACCASE 4, LMCO4, LACCASE-LIKE MULTICOPPER OXIDASE 4 -0.242 0.073
65 254037_at AT4G25760 ATGDU2, glutamine dumper 2, GDU2, glutamine dumper 2 -0.237 0.039
66 259014_at AT3G07320 [O-Glycosyl hydrolases family 17 protein] -0.236 0.004
67 255450_at AT4G02850 [phenazine biosynthesis PhzC/PhzF family protein] -0.236 0.099
68 260914_at AT1G02640 ATBXL2, BETA-XYLOSIDASE 2, BXL2, beta-xylosidase 2 -0.235 0.080
69 264025_at AT2G21050 LAX2, like AUXIN RESISTANT 2 -0.227 0.027
70 260693_at AT1G32450 AtNPF7.3, NPF7.3, NRT1/ PTR family 7.3, NRT1.5, nitrate transporter 1.5 -0.221 0.007
71 258067_at AT3G25980 AtMAD2, MAD2, MITOTIC ARREST-DEFICIENT 2 -0.212 0.010
72 256096_at AT1G13650 unknown -0.208 0.215
73 263031_at AT1G24070 ATCSLA10, cellulose synthase-like A10, CSLA10, CELLULOSE SYNTHASE LIKE A10, CSLA10, cellulose synthase-like A10 -0.205 -0.133
74 250958_at AT5G03260 LAC11, laccase 11 -0.200 0.022
75 256222_at AT1G56210 [Heavy metal transport/detoxification superfamily protein ] -0.200 0.023
76 267567_at AT2G30770 CYP71A13, cytochrome P450, family 71, subfamily A, polypeptide 13 -0.197 0.047
77 266873_at AT2G44740 CYCP4;1, cyclin p4;1 -0.193 0.100
78 255310_at AT4G04955 ALN, allantoinase, ATALN, allantoinase -0.190 -0.041
79 253947_at AT4G26760 MAP65-2, microtubule-associated protein 65-2 -0.184 -0.009
80 252148_at AT3G51280 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.183 -0.012
81 263689_at AT1G26820 RNS3, ribonuclease 3 -0.177 0.019
82 267402_at AT2G26180 IQD6, IQ-domain 6 -0.176 -0.014
83 249060_at AT5G44560 VPS2.2 -0.176 -0.035
84 251021_at AT5G02140 [Pathogenesis-related thaumatin superfamily protein] -0.174 0.013
85 259136_at AT3G05470 [Actin-binding FH2 (formin homology 2) family protein] -0.174 -0.050
86 246562_at AT5G15580 LNG1, LONGIFOLIA1, TRM2, TON1 Recruiting Motif 2 -0.167 0.071
87 248085_at AT5G55480 GDPDL4, Glycerophosphodiester phosphodiesterase (GDPD) like 4, GPDL1, glycerophosphodiesterase-like 1, SVL1, SHV3-like 1 -0.162 0.022
88 266142_at AT2G39030 NATA1, N-acetyltransferase activity 1 -0.159 -0.420
89 260475_at AT1G11080 scpl31, serine carboxypeptidase-like 31 -0.158 0.286
90 259290_at AT3G11520 CYC2, CYCLIN 2, CYCB1;3, CYCLIN B1;3 -0.153 -0.003