4.0:Information of module
small flower buds J10B
In comparison with seed germinating in countinuous light 24h SL help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006412 translation BP 1.883e-11
GO:0015979 photosynthesis BP 1.054e-09
GO:0006091 generation of precursor metabolites and ... BP 2.144e-09
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009987 cellular process BP 1.429e-08
GO:0009611 response to wounding BP 2.072e-08
GO:1902578 single-organism localization BP 4.370e-08
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
small flower buds J10B		 Log2 signal ratio
seed germinating in countinuous light 24h SL
1 244969_at ATCG00650 RPS18, ribosomal protein S18 0.659 -0.222
2 257731_at AT3G18430 [Calcium-binding EF-hand family protein] 0.541 1.431
3 266928_at AT2G45790 ATPMM, PHOSPHOMANNOMUTASE, PMM, phosphomannomutase 0.431 0.770
4 262236_at AT1G48330 unknown 0.431 0.692
5 246004_at AT5G20630 ATGER3, ARABIDOPSIS THALIANA GERMIN 3, GER3, germin 3, GLP3, GERMIN-LIKE PROTEIN 3, GLP3A, GLP3B 0.420 0.739
6 267611_at AT2G26660 ATSPX2, ARABIDOPSIS THALIANA SPX DOMAIN GENE 2, SPX2, SPX domain gene 2 0.415 0.515
7 247433_at AT5G62540 UBC3, ubiquitin-conjugating enzyme 3 0.394 0.332
8 250100_at AT5G16570 GLN1;4, glutamine synthetase 1;4 0.384 -0.419
9 260832_at AT1G06780 GAUT6, galacturonosyltransferase 6 0.368 0.263
10 258375_at AT3G17470 ATCRSH, CRSH, Ca2+-activated RelA/spot homolog 0.364 0.455
11 248098_at AT5G55290 [ATPase, V0 complex, subunit E] 0.364 0.533
12 253790_at AT4G28660 PSB28, photosystem II reaction center PSB28 protein 0.355 0.416
13 244935_at ATCG01090 NDHI 0.349 0.401
14 252076_at AT3G51660 [Tautomerase/MIF superfamily protein] 0.331 -1.015
15 251760_at AT3G55605 [Mitochondrial glycoprotein family protein] 0.330 1.423
16 262784_at AT1G10760 GWD, GWD1, SEX1, STARCH EXCESS 1, SOP, SOP1 0.323 0.588
17 248271_at AT5G53420 [CCT motif family protein] 0.321 -0.235
18 249277_at AT5G41890 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.315 -1.362
19 258719_at AT3G09540 [Pectin lyase-like superfamily protein] 0.313 -0.837
20 255629_at AT4G00860 AT0ZI1, Arabidopsis thaliana ozone-induced protein 1, ATOZI1 0.309 1.987
21 261833_at AT1G10670 ACLA-1, ATP-citrate lyase A-1 0.297 0.701
22 262405_at AT1G34650 HDG10, homeodomain GLABROUS 10 0.287 -0.774
23 244997_at ATCG00170 RPOC2 0.285 -0.393
24 254392_at AT4G21600 ENDO5, endonuclease 5 0.285 -0.185
25 253421_at AT4G32340 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.281 0.306
26 266649_at AT2G25810 TIP4;1, tonoplast intrinsic protein 4;1 0.268 0.559
27 245048_at ATCG00040 MATK, maturase K 0.266 0.223
28 258223_at AT3G15840 PIFI, post-illumination chlorophyll fluorescence increase 0.265 0.038
29 247281_at AT5G64350 ATFKBP12, ARABIDOPSIS THALIANA FK506-BINDING PROTEIN 12, FKBP12, FK506-binding protein 12, FKP12, FK506-binding protein 12 0.265 0.956
30 255248_at AT4G05180 PSBQ, PHOTOSYSTEM II SUBUNIT Q, PSBQ-2, photosystem II subunit Q-2, PSII-Q 0.261 0.585
31 247668_at AT5G60100 APRR3, pseudo-response regulator 3, PRR3, pseudo-response regulator 3 0.260 0.436
32 246457_at AT5G16750 TOZ, TORMOZEMBRYO DEFECTIVE 0.258 0.944
33 258534_at AT3G06730 TRX P, thioredoxin putative plastidic, TRX z, Thioredoxin z 0.257 0.326
34 251948_at AT3G53580 [diaminopimelate epimerase family protein] 0.256 0.992
35 245240_at AT1G44510 [copia-like retrotransposon family, has a 0. P-value blast match to dbj|BAA78426.1| polyprotein (AtRE2-1) (Arabidopsis thaliana) (Ty1_Copia-element)] 0.254 -0.127
36 245985_at AT5G13120 ATCYP20-2, ARABIDOPSIS THALIANA CYCLOPHILIN 20-2, CYP20-2, cyclophilin 20-2, Pnsl5, Photosynthetic NDH subcomplex L 5 0.252 0.604
37 251946_at AT3G53540 TRM19, TON1 Recruiting Motif 19 0.250 0.193
38 244970_at ATCG00660 RPL20, ribosomal protein L20 0.247 -0.038
39 253566_at AT4G31210 [DNA topoisomerase, type IA, core] 0.246 0.352
40 250961_at AT5G02980 [Galactose oxidase/kelch repeat superfamily protein] 0.241 -0.476
41 253871_at AT4G27440 PORB, protochlorophyllide oxidoreductase B 0.240 0.449
42 252566_at AT3G46040 RPS15AD, ribosomal protein S15A D 0.235 0.588
43 250109_at AT5G15230 GASA4, GAST1 protein homolog 4 0.228 0.760
44 247704_at AT5G59510 DVL18, DEVIL 18, RTFL5, ROTUNDIFOLIA like 5 0.228 -0.184
45 252051_at AT3G52570 [alpha/beta-Hydrolases superfamily protein] 0.227 0.450
46 255406_at AT4G03450 [Ankyrin repeat family protein] 0.226 -0.140
47 264360_at AT1G03310 AtBE2, ATISA2, ARABIDOPSIS THALIANA ISOAMYLASE 2, BE2, BRANCHING ENZYME 2, DBE1, debranching enzyme 1, ISA2 0.225 0.978
48 251864_at AT3G54920 PMR6, powdery mildew resistant 6 0.224 0.520
49 246019_at AT5G10690 [pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein] 0.221 -0.067
50 252366_at AT3G48420 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] 0.219 0.108
51 249212_at AT5G42690 unknown 0.218 0.474
52 265358_at AT2G16710 [Iron-sulphur cluster biosynthesis family protein] 0.216 0.102
53 261421_at AT1G18840 IQD30, IQ-domain 30 0.214 1.274
54 257170_at AT3G23770 [O-Glycosyl hydrolases family 17 protein] -0.924 -0.270
55 262645_at AT1G62750 ATSCO1, SNOWY COTYLEDON 1, ATSCO1/CPEF-G, SCO1, SNOWY COTYLEDON 1 -0.780 0.385
56 254494_at AT4G20050 QRT3, QUARTET 3 -0.740 -0.472
57 255257_at AT4G05050 UBQ11, ubiquitin 11 -0.665 0.861
58 246139_at AT5G19900 [PRLI-interacting factor, putative] -0.479 0.793
59 253814_at AT4G28290 unknown -0.476 0.195
60 261410_at AT1G07610 MT1C, metallothionein 1C -0.472 1.341
61 250619_at AT5G07230 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.472 -1.113
62 253222_at AT4G34850 LAP5, LESS ADHESIVE POLLEN 5, PSKB, polyketide synthase B -0.467 -0.102
63 255764_at AT1G16720 HCF173, high chlorophyll fluorescence phenotype 173 -0.413 0.270
64 252677_at AT3G44320 AtNIT3, NITRILASE 3, NIT3, nitrilase 3 -0.396 0.062
65 265883_at AT2G42310 unknown -0.368 1.413
66 257797_at AT3G15940 [UDP-Glycosyltransferase superfamily protein] -0.359 1.113
67 249415_at AT5G39660 CDF2, cycling DOF factor 2 -0.355 0.374
68 253237_at AT4G34240 ALDH3, aldehyde dehydrogenase 3, ALDH3I1, aldehyde dehydrogenase 3I1 -0.345 0.661
69 260481_at AT1G10960 ATFD1, ferredoxin 1, FD1, ferredoxin 1 -0.325 0.580
70 265680_at AT2G32150 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] -0.315 0.717
71 266327_at AT2G46680 ATHB-7, homeobox 7, ATHB7, ARABIDOPSIS THALIANA HOMEOBOX 7, HB-7, homeobox 7 -0.309 -0.602
72 247487_at AT5G62150 [peptidoglycan-binding LysM domain-containing protein] -0.305 -0.455
73 261150_at AT1G19640 JMT, jasmonic acid carboxyl methyltransferase -0.305 -0.814
74 245622_at AT4G14080 MEE48, maternal effect embryo arrest 48 -0.295 -0.558
75 266072_at AT2G18700 ATTPS11, trehalose phosphatase/synthase 11, ATTPSB, TPS11, trehalose phosphatase/synthase 11, TPS11, TREHALOSE-6-PHOSPHATE SYNTHASE 11 -0.292 0.943
76 247175_at AT5G65280 GCL1, GCR2-like 1 -0.286 0.053
77 249550_at AT5G38210 [Protein kinase family protein] -0.281 0.338
78 251984_at AT3G53260 ATPAL2, PAL2, phenylalanine ammonia-lyase 2 -0.271 0.199
79 253625_at AT4G30600 [signal recognition particle receptor alpha subunit family protein] -0.265 1.038
80 259970_at AT1G76570 AtLHCB7, LHCB7, light-harvesting complex B7 -0.259 0.361
81 261901_at AT1G80920 AtJ8, AtToc12, translocon at the outer envelope membrane of chloroplasts 12, DJC22, DNA J protein C22, J8, Toc12, translocon at the outer envelope membrane of chloroplasts 12 -0.256 0.158
82 250264_at AT5G12890 [UDP-Glycosyltransferase superfamily protein] -0.252 -0.541
83 248160_at AT5G54470 BBX29, B-box domain protein 29 -0.248 0.478
84 251066_at AT5G01880 DAFL2, DAF-Like gene 2 -0.247 -0.650
85 250126_at AT5G16310 UCH1 -0.246 0.534
86 253830_at AT4G27652 unknown -0.243 0.508
87 266993_at AT2G39210 [Major facilitator superfamily protein] -0.238 0.958
88 250131_at AT5G16550 unknown -0.231 -0.324
89 247467_at AT5G62130 [Per1-like family protein] -0.229 -0.426
90 256398_at AT3G06100 NIP7;1, NOD26-like intrinsic protein 7;1, NLM6, NOD26-LIKE MIP 6, NLM8, NOD26-LIKE MIP 8 -0.229 0.062
91 247723_at AT5G59220 HAI1, highly ABA-induced PP2C gene 1, SAG113, senescence associated gene 113 -0.228 -0.746
92 250699_at AT5G06820 SRF2, STRUBBELIG-receptor family 2 -0.225 -0.083
93 246897_at AT5G25560 [CHY-type/CTCHY-type/RING-type Zinc finger protein] -0.225 0.668
94 261892_at AT1G80840 ATWRKY40, WRKY40, WRKY DNA-binding protein 40 -0.223 -0.520
95 250335_at AT5G11650 [alpha/beta-Hydrolases superfamily protein] -0.217 0.309
96 259965_at AT1G53670 ATMSRB1, MSRB1, methionine sulfoxide reductase B 1 -0.216 0.694
97 263010_at AT1G23330 [alpha/beta-Hydrolases superfamily protein] -0.212 -0.008
98 252826_at AT4G40050 [FUNCTIONS IN: signal transducer activity] -0.210 0.891
99 246598_at AT5G14850 [Alg9-like mannosyltransferase family] -0.210 0.490
100 258035_at AT3G21180 ACA9, autoinhibited Ca(2+)-ATPase 9, ATACA9 -0.209 0.381
101 247455_at AT5G62470 ATMYB96, MYB DOMAIN PROTEIN 96, MYB96, myb domain protein 96, MYBCOV1 -0.208 -0.488
102 258321_at AT3G22840 ELIP, ELIP1, EARLY LIGHT-INDUCABLE PROTEIN -0.200 0.875
103 246555_at AT5G15470 GAUT14, galacturonosyltransferase 14 -0.199 0.274
104 265445_at AT2G37190 [Ribosomal protein L11 family protein] -0.198 0.716
105 263433_at AT2G22240 ATIPS2, INOSITOL 3-PHOSPHATE SYNTHASE 2, ATMIPS2, MYO-INOSITOL-1-PHOSTPATE SYNTHASE 2, MIPS2, myo-inositol-1-phosphate synthase 2 -0.195 -0.548