4.0:Information of module
middle flower buds J10A
In comparison with Red/FR Light45min help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006094 gluconeogenesis BP 2.443e-03
GO:0009926 auxin polar transport BP 2.453e-03
GO:0019319 hexose biosynthetic process BP 2.891e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006637 acyl-CoA metabolic process BP 2.301e-05
GO:0035383 thioester metabolic process BP 2.301e-05
GO:0019752 carboxylic acid metabolic process BP 1.018e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
middle flower buds J10A		 Log2 signal ratio
Red/FR Light45min
1 261375_at AT1G53160 FTM6, FLORAL TRANSITION AT THE MERISTEM6, SPL4, squamosa promoter binding protein-like 4 0.507 0.011
2 259238_at AT3G11400 ATEIF3G1, EIF3G1, eukaryotic translation initiation factor 3G1 0.405 0.012
3 262629_at AT1G06460 ACD31.2, ALPHA-CRYSTALLIN DOMAIN 31.2, ACD32.1, alpha-crystallin domain 32.1 0.360 0.008
4 247867_at AT5G57630 CIPK21, CBL-interacting protein kinase 21, SnRK3.4, SNF1-RELATED PROTEIN KINASE 3.4 0.343 -0.009
5 251590_at AT3G57690 AGP23, arabinogalactan protein 23, ATAGP23, ARABINOGALACTAN-PROTEIN 23 0.325 -0.014
6 246351_at AT1G16570 [UDP-Glycosyltransferase superfamily protein] 0.323 0.003
7 265630_at AT2G27350 OTLD1, otubain-like deubiquitinase 1 0.313 0.010
8 246019_at AT5G10690 [pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein] 0.311 -0.029
9 252236_at AT3G49930 [C2H2 and C2HC zinc fingers superfamily protein] 0.297 -0.015
10 263024_at AT1G23980 [RING/U-box superfamily protein] 0.292 -0.006
11 259632_at AT1G56430 ATNAS4, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 4, NAS4, nicotianamine synthase 4 0.292 0.014
12 258223_at AT3G15840 PIFI, post-illumination chlorophyll fluorescence increase 0.286 -0.022
13 263958_at AT2G36240 [pentatricopeptide (PPR) repeat-containing protein] 0.284 -0.036
14 261135_at AT1G19610 LCR78, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 78, PDF1.4 0.278 0.031
15 245429_at AT4G17580 [Bax inhibitor-1 family protein] 0.266 -0.125
16 257618_at AT3G24715 [Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain] 0.263 0.010
17 257516_at AT1G69040 ACR4, ACT domain repeat 4 0.261 0.024
18 251466_at AT3G59340 unknown 0.258 -0.001
19 245047_at ATCG00020 PSBA, photosystem II reaction center protein A 0.256 -0.019
20 263348_at AT2G05710 ACO3, aconitase 3 0.249 0.015
21 261660_at AT1G18370 ATNACK1, ARABIDOPSIS NPK1-ACTIVATING KINESIN 1, HIK, HINKEL, NACK1, NPK1-ACTIVATING KINESIN 1 0.246 0.066
22 246594_at AT5G14800 AT-P5C1, AT-P5R, PYRROLINE-5- CARBOXYLATE (P5C) REDUCTASE, EMB2772, EMBRYO DEFECTIVE 2772, P5CR, pyrroline-5- carboxylate (P5C) reductase 0.246 0.003
23 258964_at AT3G10540 [3-phosphoinositide-dependent protein kinase] 0.242 -0.004
24 263038_at AT1G23270 unknown 0.238 -0.031
25 247673_at AT5G60230 ATSEN2, SPLICING ENDONUCLEASE 2, SEN2, splicing endonuclease 2 0.238 0.000
26 258369_at AT3G14310 ATPME3, pectin methylesterase 3, OZS2, OVERLY ZINC SENSITIVE 2, PME3, pectin methylesterase 3 0.237 0.017
27 255497_at AT4G02590 UNE12, unfertilized embryo sac 12 0.235 0.030
28 265393_at AT2G20830 [transferases] 0.233 -0.003
29 254396_at AT4G21680 AtNPF7.2, NPF7.2, NRT1/ PTR family 7.2, NRT1.8, NITRATE TRANSPORTER 1.8 0.230 -0.090
30 252142_at AT3G51120 [DNA binding] 0.227 0.031
31 257169_at AT3G24315 AtSec20, SEC20 0.225 -0.012
32 264246_at AT1G60140 ATTPS10, trehalose phosphate synthase, TPS10, trehalose phosphate synthase, TPS10, TREHALOSE PHOSPHATE SYNTHASE 10 0.223 -0.001
33 266738_at AT2G47010 unknown 0.222 -0.007
34 264674_at AT1G09815 POLD4, polymerase delta 4 0.221 0.015
35 255812_at AT4G10310 ATHKT1, HKT1, high-affinity K+ transporter 1, HKT1;1 0.220 -0.026
36 246544_at AT5G15100 ATPIN8, PIN-FORMED 8, PIN8, PIN-FORMED 8 0.220 0.021
37 249965_at AT5G19020 MEF18, mitochondrial editing factor 18 -0.722 -0.014
38 256144_at AT1G48630 RACK1B, receptor for activated C kinase 1B, RACK1B_AT, receptor for activated C kinase 1B -0.642 0.018
39 267066_at AT2G41040 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.541 0.030
40 251912_at AT3G53840 [Protein kinase superfamily protein] -0.496 -0.031
41 264175_at AT1G02050 LAP6, LESS ADHESIVE POLLEN 6, PSKA, polyketide synthase A -0.479 0.009
42 255257_at AT4G05050 UBQ11, ubiquitin 11 -0.457 0.002
43 253237_at AT4G34240 ALDH3, aldehyde dehydrogenase 3, ALDH3I1, aldehyde dehydrogenase 3I1 -0.417 -0.001
44 248690_at AT5G48230 AACT2, Acetoacetyl-CoA thiolase 2, ACAT2, acetoacetyl-CoA thiolase 2, EMB1276, EMBRYO DEFECTIVE 1276 -0.406 0.007
45 266391_at AT2G41290 SSL2, strictosidine synthase-like 2 -0.382 -0.019
46 253090_at AT4G36360 BGAL3, beta-galactosidase 3 -0.354 -0.018
47 250180_at AT5G14450 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.331 -0.039
48 248761_at AT5G47635 [Pollen Ole e 1 allergen and extensin family protein] -0.326 -0.005
49 250399_at AT5G10750 unknown -0.313 0.027
50 260076_at AT1G73630 [EF hand calcium-binding protein family] -0.310 0.047
51 254110_at AT4G25260 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.306 -0.008
52 252805_at AT3G42380 unknown -0.306 0.023
53 258439_at AT3G17240 mtLPD2, lipoamide dehydrogenase 2 -0.298 0.013
54 260706_at AT1G32350 AOX1D, alternative oxidase 1D -0.297 -0.016
55 250294_at AT5G13380 [Auxin-responsive GH3 family protein] -0.274 -0.020
56 264007_at AT2G21140 ATPRP2, proline-rich protein 2, PRP2, proline-rich protein 2 -0.273 -0.005
57 264598_at AT1G04610 YUC3, YUCCA 3 -0.262 -0.014
58 262477_at AT1G11220 unknown -0.257 -0.031
59 247588_at AT5G60640 ATPDI2, ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 2, ATPDIL1-4, PDI-like 1-4, PDI2, PROTEIN DISULFIDE ISOMERASE 2, PDIL1-4, PDI-like 1-4 -0.255 -0.005
60 253709_at AT4G29220 PFK1, phosphofructokinase 1 -0.255 0.002
61 257766_at AT3G23030 IAA2, indole-3-acetic acid inducible 2 -0.240 -0.017
62 248622_at AT5G49360 ATBXL1, BETA-XYLOSIDASE 1, BXL1, beta-xylosidase 1 -0.231 0.004
63 262123_at AT1G59630 [F-box associated ubiquitination effector family protein] -0.230 0.004
64 253048_at AT4G37560 [Acetamidase/Formamidase family protein] -0.227 -0.034
65 258271_at AT3G15605 [nucleic acid binding] -0.221 -0.016
66 263431_at AT2G22170 PLAT2, PLAT domain protein 2 -0.218 -0.005
67 258140_at AT3G24503 ALDH1A, aldehyde dehydrogenase 1A, ALDH2C4, aldehyde dehydrogenase 2C4, REF1, REDUCED EPIDERMAL FLUORESCENCE1 -0.217 -0.002
68 263934_at AT2G35950 EDA12, embryo sac development arrest 12 -0.214 0.002
69 249158_at AT5G43430 ETFBETA, electron transfer flavoprotein beta -0.213 0.026
70 253042_at AT4G37550 [Acetamidase/Formamidase family protein] -0.212 -0.011
71 253238_at AT4G34480 [O-Glycosyl hydrolases family 17 protein] -0.197 0.008