4.0:Information of module
middle flower buds J10A
In comparison with seed germinating in countinuous light 24h SL help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006094 gluconeogenesis BP 2.443e-03
GO:0009926 auxin polar transport BP 2.453e-03
GO:0019319 hexose biosynthetic process BP 2.891e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006637 acyl-CoA metabolic process BP 2.301e-05
GO:0035383 thioester metabolic process BP 2.301e-05
GO:0019752 carboxylic acid metabolic process BP 1.018e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
middle flower buds J10A		 Log2 signal ratio
seed germinating in countinuous light 24h SL
1 261375_at AT1G53160 FTM6, FLORAL TRANSITION AT THE MERISTEM6, SPL4, squamosa promoter binding protein-like 4 0.507 -0.697
2 259238_at AT3G11400 ATEIF3G1, EIF3G1, eukaryotic translation initiation factor 3G1 0.405 0.545
3 262629_at AT1G06460 ACD31.2, ALPHA-CRYSTALLIN DOMAIN 31.2, ACD32.1, alpha-crystallin domain 32.1 0.360 -0.508
4 247867_at AT5G57630 CIPK21, CBL-interacting protein kinase 21, SnRK3.4, SNF1-RELATED PROTEIN KINASE 3.4 0.343 -0.597
5 251590_at AT3G57690 AGP23, arabinogalactan protein 23, ATAGP23, ARABINOGALACTAN-PROTEIN 23 0.325 0.405
6 246351_at AT1G16570 [UDP-Glycosyltransferase superfamily protein] 0.323 0.320
7 265630_at AT2G27350 OTLD1, otubain-like deubiquitinase 1 0.313 0.516
8 246019_at AT5G10690 [pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein] 0.311 -0.067
9 252236_at AT3G49930 [C2H2 and C2HC zinc fingers superfamily protein] 0.297 -1.098
10 263024_at AT1G23980 [RING/U-box superfamily protein] 0.292 -0.230
11 259632_at AT1G56430 ATNAS4, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 4, NAS4, nicotianamine synthase 4 0.292 0.668
12 258223_at AT3G15840 PIFI, post-illumination chlorophyll fluorescence increase 0.286 0.038
13 263958_at AT2G36240 [pentatricopeptide (PPR) repeat-containing protein] 0.284 -0.172
14 261135_at AT1G19610 LCR78, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 78, PDF1.4 0.278 -0.843
15 245429_at AT4G17580 [Bax inhibitor-1 family protein] 0.266 -0.248
16 257618_at AT3G24715 [Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain] 0.263 -0.413
17 257516_at AT1G69040 ACR4, ACT domain repeat 4 0.261 -0.100
18 251466_at AT3G59340 unknown 0.258 -0.049
19 245047_at ATCG00020 PSBA, photosystem II reaction center protein A 0.256 -0.297
20 263348_at AT2G05710 ACO3, aconitase 3 0.249 1.101
21 261660_at AT1G18370 ATNACK1, ARABIDOPSIS NPK1-ACTIVATING KINESIN 1, HIK, HINKEL, NACK1, NPK1-ACTIVATING KINESIN 1 0.246 0.525
22 246594_at AT5G14800 AT-P5C1, AT-P5R, PYRROLINE-5- CARBOXYLATE (P5C) REDUCTASE, EMB2772, EMBRYO DEFECTIVE 2772, P5CR, pyrroline-5- carboxylate (P5C) reductase 0.246 0.980
23 258964_at AT3G10540 [3-phosphoinositide-dependent protein kinase] 0.242 0.110
24 263038_at AT1G23270 unknown 0.238 -0.987
25 247673_at AT5G60230 ATSEN2, SPLICING ENDONUCLEASE 2, SEN2, splicing endonuclease 2 0.238 0.039
26 258369_at AT3G14310 ATPME3, pectin methylesterase 3, OZS2, OVERLY ZINC SENSITIVE 2, PME3, pectin methylesterase 3 0.237 0.886
27 255497_at AT4G02590 UNE12, unfertilized embryo sac 12 0.235 -0.356
28 265393_at AT2G20830 [transferases] 0.233 0.330
29 254396_at AT4G21680 AtNPF7.2, NPF7.2, NRT1/ PTR family 7.2, NRT1.8, NITRATE TRANSPORTER 1.8 0.230 0.163
30 252142_at AT3G51120 [DNA binding] 0.227 0.458
31 257169_at AT3G24315 AtSec20, SEC20 0.225 -0.109
32 264246_at AT1G60140 ATTPS10, trehalose phosphate synthase, TPS10, trehalose phosphate synthase, TPS10, TREHALOSE PHOSPHATE SYNTHASE 10 0.223 0.229
33 266738_at AT2G47010 unknown 0.222 0.591
34 264674_at AT1G09815 POLD4, polymerase delta 4 0.221 0.469
35 255812_at AT4G10310 ATHKT1, HKT1, high-affinity K+ transporter 1, HKT1;1 0.220 0.007
36 246544_at AT5G15100 ATPIN8, PIN-FORMED 8, PIN8, PIN-FORMED 8 0.220 -0.739
37 249965_at AT5G19020 MEF18, mitochondrial editing factor 18 -0.722 -0.296
38 256144_at AT1G48630 RACK1B, receptor for activated C kinase 1B, RACK1B_AT, receptor for activated C kinase 1B -0.642 0.583
39 267066_at AT2G41040 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.541 -0.277
40 251912_at AT3G53840 [Protein kinase superfamily protein] -0.496 -1.305
41 264175_at AT1G02050 LAP6, LESS ADHESIVE POLLEN 6, PSKA, polyketide synthase A -0.479 -0.360
42 255257_at AT4G05050 UBQ11, ubiquitin 11 -0.457 0.861
43 253237_at AT4G34240 ALDH3, aldehyde dehydrogenase 3, ALDH3I1, aldehyde dehydrogenase 3I1 -0.417 0.661
44 248690_at AT5G48230 AACT2, Acetoacetyl-CoA thiolase 2, ACAT2, acetoacetyl-CoA thiolase 2, EMB1276, EMBRYO DEFECTIVE 1276 -0.406 0.198
45 266391_at AT2G41290 SSL2, strictosidine synthase-like 2 -0.382 0.443
46 253090_at AT4G36360 BGAL3, beta-galactosidase 3 -0.354 -0.141
47 250180_at AT5G14450 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.331 1.802
48 248761_at AT5G47635 [Pollen Ole e 1 allergen and extensin family protein] -0.326 -0.888
49 250399_at AT5G10750 unknown -0.313 0.139
50 260076_at AT1G73630 [EF hand calcium-binding protein family] -0.310 -0.715
51 254110_at AT4G25260 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.306 -0.208
52 252805_at AT3G42380 unknown -0.306 0.107
53 258439_at AT3G17240 mtLPD2, lipoamide dehydrogenase 2 -0.298 0.415
54 260706_at AT1G32350 AOX1D, alternative oxidase 1D -0.297 -0.991
55 250294_at AT5G13380 [Auxin-responsive GH3 family protein] -0.274 -0.668
56 264007_at AT2G21140 ATPRP2, proline-rich protein 2, PRP2, proline-rich protein 2 -0.273 0.988
57 264598_at AT1G04610 YUC3, YUCCA 3 -0.262 -0.163
58 262477_at AT1G11220 unknown -0.257 -0.558
59 247588_at AT5G60640 ATPDI2, ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 2, ATPDIL1-4, PDI-like 1-4, PDI2, PROTEIN DISULFIDE ISOMERASE 2, PDIL1-4, PDI-like 1-4 -0.255 1.320
60 253709_at AT4G29220 PFK1, phosphofructokinase 1 -0.255 0.272
61 257766_at AT3G23030 IAA2, indole-3-acetic acid inducible 2 -0.240 0.559
62 248622_at AT5G49360 ATBXL1, BETA-XYLOSIDASE 1, BXL1, beta-xylosidase 1 -0.231 0.444
63 262123_at AT1G59630 [F-box associated ubiquitination effector family protein] -0.230 -0.690
64 253048_at AT4G37560 [Acetamidase/Formamidase family protein] -0.227 -0.534
65 258271_at AT3G15605 [nucleic acid binding] -0.221 -0.792
66 263431_at AT2G22170 PLAT2, PLAT domain protein 2 -0.218 0.734
67 258140_at AT3G24503 ALDH1A, aldehyde dehydrogenase 1A, ALDH2C4, aldehyde dehydrogenase 2C4, REF1, REDUCED EPIDERMAL FLUORESCENCE1 -0.217 0.614
68 263934_at AT2G35950 EDA12, embryo sac development arrest 12 -0.214 -0.857
69 249158_at AT5G43430 ETFBETA, electron transfer flavoprotein beta -0.213 0.147
70 253042_at AT4G37550 [Acetamidase/Formamidase family protein] -0.212 0.469
71 253238_at AT4G34480 [O-Glycosyl hydrolases family 17 protein] -0.197 -0.433