4.0:Information of module
sav1-1 light
In comparison with cat2-2; harvested 8h continiously maintained in high CO2; help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0001510 RNA methylation BP 3.225e-10
GO:0006412 translation BP 8.411e-10
GO:0009451 RNA modification BP 2.165e-08
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0071554 cell wall organization or biogenesis BP 7.498e-04
GO:0009926 auxin polar transport BP 2.762e-03
GO:0060918 auxin transport BP 3.059e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
sav1-1 light		 Log2 signal ratio
cat2-2; harvested 8h continiously maintained in high CO2;
1 259352_at AT3G05170 [Phosphoglycerate mutase family protein] 0.441 -0.002
2 262382_at AT1G72920 [Toll-Interleukin-Resistance (TIR) domain family protein] 0.305 -0.230
3 248448_at AT5G51190 [Integrase-type DNA-binding superfamily protein] 0.303 -0.061
4 253915_at AT4G27280 [Calcium-binding EF-hand family protein] 0.235 -0.082
5 262092_at AT1G56150 SAUR71, SMALL AUXIN UPREGULATED 71 0.234 -0.112
6 264774_at AT1G22890 unknown 0.229 -0.173
7 262047_at AT1G80160 GLYI7, glyoxylase I 7 0.216 -0.277
8 252679_at AT3G44260 AtCAF1a, CCR4- associated factor 1a, CAF1a, CCR4- associated factor 1a 0.206 -0.089
9 247543_at AT5G61600 ERF104, ethylene response factor 104 0.205 -0.157
10 247337_at AT5G63660 LCR74, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 74, PDF2.5 0.194 0.021
11 256598_at AT3G30180 BR6OX2, brassinosteroid-6-oxidase 2, CYP85A2 0.192 -0.001
12 263182_at AT1G05575 unknown 0.183 -0.241
13 255110_at AT4G08770 Prx37, peroxidase 37 0.180 -0.381
14 256349_at AT1G54890 [Late embryogenesis abundant (LEA) protein-related] 0.177 -0.055
15 264505_at AT1G09380 UMAMIT25, Usually multiple acids move in and out Transporters 25 0.177 0.069
16 266658_at AT2G25735 unknown 0.167 -0.180
17 253315_at AT4G33900 [Galactose oxidase/kelch repeat superfamily protein] 0.159 0.073
18 249454_at AT5G39520 unknown 0.159 -0.411
19 245151_at AT2G47550 [Plant invertase/pectin methylesterase inhibitor superfamily] 0.157 -0.026
20 257690_at AT3G12830 SAUR72, SMALL AUXIN UPREGULATED 72 0.147 -0.160
21 265155_at AT1G30990 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] 0.146 -0.063
22 258078_at AT3G25870 unknown 0.145 -0.071
23 265028_at AT1G24530 [Transducin/WD40 repeat-like superfamily protein] 0.140 -0.163
24 256442_at AT3G10930 unknown 0.139 -0.339
25 254905_at AT4G11170 RMG1, Resistance Methylated Gene 1 0.137 -0.328
26 256898_at AT3G24650 ABI3, ABA INSENSITIVE 3, ABI3, ABSCISIC ACID INSENSITIVE 3, SIS10, SUGAR INSENSITIVE 10 0.137 0.075
27 250024_at AT5G18270 ANAC087, Arabidopsis NAC domain containing protein 87 0.135 0.039
28 253439_at AT4G32540 YUC, YUCCA, YUC1, YUCCA 1 0.133 0.022
29 255926_at AT1G22190 RAP2.4, related to AP2 4 0.133 -0.019
30 257551_at AT3G13270 unknown 0.132 -0.074
31 248932_at AT5G46050 AtNPF5.2, ATPTR3, ARABIDOPSIS THALIANA PEPTIDE TRANSPORTER 3, NPF5.2, NRT1/ PTR family 5.2, PTR3, peptide transporter 3 0.124 -0.439
32 264860_at AT1G24290 [AAA-type ATPase family protein] 0.123 0.013
33 248788_at AT5G47430 [DWNN domain, a CCHC-type zinc finger] 0.121 -0.067
34 264100_at AT1G78970 ATLUP1, ARABIDOPSIS THALIANA LUPEOL SYNTHASE 1, LUP1, lupeol synthase 1 -0.337 0.101
35 266654_at AT2G25890 [Oleosin family protein] -0.306 0.073
36 259329_at AT3G16360 AHP4, HPT phosphotransmitter 4 -0.280 0.022
37 259331_at AT3G03840 SAUR27, SMALL AUXIN UP RNA 27 -0.272 0.174
38 249053_at AT5G44440 [FAD-binding Berberine family protein] -0.263 0.053
39 264157_at AT1G65310 ATXTH17, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 17, XTH17, xyloglucan endotransglucosylase/hydrolase 17 -0.261 0.169
40 245005_at ATCG00330 RPS14, chloroplast ribosomal protein S14 -0.255 0.050
41 256464_at AT1G32560 AtLEA4-1, Late Embryogenesis Abundant 4-1, LEA4-1, Late Embryogenesis Abundant 4-1 -0.252 0.001
42 265672_at AT2G31980 AtCYS2, PHYTOCYSTATIN 2, CYS2, PHYTOCYSTATIN 2 -0.247 0.027
43 253720_at AT4G29270 [HAD superfamily, subfamily IIIB acid phosphatase ] -0.223 -0.074
44 245326_at AT4G14100 [transferases, transferring glycosyl groups] -0.212 -0.005
45 249278_at AT5G41900 [alpha/beta-Hydrolases superfamily protein] -0.210 0.066
46 249869_at AT5G23050 AAE17, acyl-activating enzyme 17 -0.209 0.039
47 260939_at AT1G45180 [RING/U-box superfamily protein] -0.206 0.029
48 250657_at AT5G07000 ATST2B, ARABIDOPSIS THALIANA SULFOTRANSFERASE 2B, ST2B, sulfotransferase 2B -0.201 0.110
49 259846_at AT1G72140 [Major facilitator superfamily protein] -0.200 0.128
50 247095_at AT5G66400 ATDI8, ARABIDOPSIS THALIANA DROUGHT-INDUCED 8, RAB18, RESPONSIVE TO ABA 18 -0.190 0.067
51 255812_at AT4G10310 ATHKT1, HKT1, high-affinity K+ transporter 1, HKT1;1 -0.179 0.132
52 254234_at AT4G23680 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.177 0.034
53 260152_at AT1G52830 IAA6, indole-3-acetic acid 6, SHY1, SHORT HYPOCOTYL 1 -0.172 0.088
54 245156_at AT5G12480 CPK7, calmodulin-domain protein kinase 7 -0.165 -0.122
55 250823_at AT5G05180 unknown -0.162 0.045
56 258145_at AT3G18200 UMAMIT4, Usually multiple acids move in and out Transporters 4 -0.161 0.067
57 263120_at AT1G78490 CYP708A3, cytochrome P450, family 708, subfamily A, polypeptide 3 -0.159 0.017
58 245336_at AT4G16515 CLEL 6, CLE-like 6, GLV1, GOLVEN 1, RGF6, root meristem growth factor 6 -0.156 0.085
59 250054_at AT5G17860 CAX7, calcium exchanger 7 -0.156 -0.100
60 256489_at AT1G31550 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.154 -0.020
61 267264_at AT2G22970 SCPL11, serine carboxypeptidase-like 11 -0.149 -0.002
62 254609_at AT4G18970 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.129 0.097
63 263765_at AT2G21540 ATSFH3, SEC14-LIKE 3, SFH3, SEC14-like 3 -0.125 0.072
64 265246_at AT2G43050 ATPMEPCRD -0.121 0.059
65 250408_at AT5G10930 CIPK5, CBL-interacting protein kinase 5, SnRK3.24, SNF1-RELATED PROTEIN KINASE 3.24 -0.119 0.054