4.0:Information of module
ani1 T0.5
In comparison with seed germinating in countinuous light 48 h SL help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0044763 single-organism cellular process BP 7.749e-04
GO:0016043 cellular component organization BP 1.403e-03
GO:0006996 organelle organization BP 1.611e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:1901700 response to oxygen-containing compound BP 4.725e-07
GO:0018958 phenol-containing compound metabolic pro... BP 5.399e-07
GO:0010200 response to chitin BP 1.325e-06
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
ani1 T0.5		 Log2 signal ratio
seed germinating in countinuous light 48 h SL
1 254187_at AT4G23890 CRR31, CHLORORESPIRATORY REDUCTION 31, NdhS, NADH dehydrogenase-like complex S 0.379 1.044
2 250868_at AT5G03860 MLS, malate synthase 0.348 1.625
3 251154_at AT3G63110 ATIPT3, isopentenyltransferase 3, IPT3, isopentenyltransferase 3 0.288 0.189
4 251658_at AT3G57020 [Calcium-dependent phosphotriesterase superfamily protein] 0.273 0.444
5 246510_at AT5G15410 ATCNGC2, CYCLIC NUCLEOTIDE-GATED CHANNEL 2, CNGC2, CYCLIC NUCLEOTIDE GATED CHANNEL 2, DND1, DEFENSE NO DEATH 1 0.265 0.077
6 245126_at AT2G47460 ATMYB12, MYB DOMAIN PROTEIN 12, MYB12, myb domain protein 12, PFG1, PRODUCTION OF FLAVONOL GLYCOSIDES 1 0.254 -0.405
7 258983_at AT3G08860 PYD4, PYRIMIDINE 4 0.235 -0.042
8 250165_at AT5G15290 CASP5, Casparian strip membrane domain protein 5 0.183 -0.684
9 252092_at AT3G51420 ATSSL4, STRICTOSIDINE SYNTHASE-LIKE 4, SSL4, strictosidine synthase-like 4 0.174 0.223
10 245904_at AT5G11110 ATSPS2F, sucrose phosphate synthase 2F, KNS2, KAONASHI 2, SPS1, SUCROSE PHOSPHATE SYNTHASE 1, SPS2F, sucrose phosphate synthase 2F, SPSA2, sucrose-phosphate synthase A2 0.163 -0.378
11 257172_at AT3G23700 [Nucleic acid-binding proteins superfamily] 0.156 1.097
12 249037_at AT5G44130 FLA13, FASCICLIN-like arabinogalactan protein 13 precursor 0.148 0.871
13 245262_at AT4G16563 [Eukaryotic aspartyl protease family protein] 0.138 -0.046
14 256098_at AT1G13700 PGL1, 6-phosphogluconolactonase 1 0.128 -0.394
15 266392_at AT2G41280 ATM10, M10 -0.572 -0.966
16 246349_at AT1G51915 [cryptdin protein-related] -0.524 -1.070
17 261021_at AT1G26380 [FAD-binding Berberine family protein] -0.389 -0.639
18 256306_at AT1G30370 DLAH, DAD1-like acylhydrolase -0.349 -0.610
19 245038_at AT2G26560 PLA IIA, PHOSPHOLIPASE A 2A, PLA2A, phospholipase A 2A, PLAII alpha, PLP2, PATATIN-LIKE PROTEIN 2, PLP2, PHOSPHOLIPASE A 2A -0.344 0.262
20 246821_at AT5G26920 CBP60G, Cam-binding protein 60-like G -0.342 -0.846
21 248979_at AT5G45080 AtPP2-A6, phloem protein 2-A6, PP2-A6, phloem protein 2-A6 -0.340 0.201
22 245662_at AT1G28190 unknown -0.296 -0.973
23 249197_at AT5G42380 CML37, calmodulin like 37 -0.264 -0.059
24 253660_at AT4G30140 CDEF1, CUTICLE DESTRUCTING FACTOR 1 -0.256 0.694
25 252596_at AT3G45330 LecRK-I.1, L-type lectin receptor kinase I.1 -0.241 -0.523
26 249896_at AT5G22530 unknown -0.239 -0.608
27 259211_at AT3G09020 [alpha 1,4-glycosyltransferase family protein] -0.238 -1.615
28 253643_at AT4G29780 unknown -0.198 0.195