4.0:Information of module
SQ8 roots 2hr KCl control
In comparison with rcf1-1 cold 24h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010243 response to organonitrogen compound BP 2.183e-07
GO:0010200 response to chitin BP 2.468e-07
GO:0014070 response to organic cyclic compound BP 5.081e-07
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0042542 response to hydrogen peroxide BP 7.673e-08
GO:0000302 response to reactive oxygen species BP 9.576e-08
GO:0006950 response to stress BP 3.133e-06
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
SQ8 roots 2hr KCl control		 Log2 signal ratio
rcf1-1 cold 24h
1 248122_at AT5G54700 [Ankyrin repeat family protein] 1.239 -0.059
2 253707_at AT4G29200 [Beta-galactosidase related protein] 1.117 -0.016
3 261020_at AT1G26390 [FAD-binding Berberine family protein] 0.968 0.442
4 261459_at AT1G21100 IGMT1, indole glucosinolate O-methyltransferase 1 0.906 0.080
5 248703_at AT5G48430 [Eukaryotic aspartyl protease family protein] 0.811 0.059
6 251334_at AT3G61390 [RING/U-box superfamily protein] 0.738 0.023
7 248052_at AT5G55800 [Cysteine/Histidine-rich C1 domain family protein] 0.717 -0.056
8 250135_at AT5G15360 unknown 0.697 0.004
9 254566_at AT4G19240 unknown 0.693 0.164
10 249780_at AT5G24240 [Phosphatidylinositol 3- and 4-kinase ] 0.684 -0.002
11 256736_at AT3G29410 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] 0.654 0.168
12 253796_at AT4G28460 unknown 0.646 0.983
13 249364_at AT5G40590 [Cysteine/Histidine-rich C1 domain family protein] 0.634 0.189
14 245038_at AT2G26560 PLA IIA, PHOSPHOLIPASE A 2A, PLA2A, phospholipase A 2A, PLAII alpha, PLP2, PATATIN-LIKE PROTEIN 2, PLP2, PHOSPHOLIPASE A 2A 0.629 0.472
15 247215_at AT5G64905 PROPEP3, elicitor peptide 3 precursor 0.612 0.044
16 255471_at AT4G03050 AOP3 0.603 0.164
17 252663_at AT3G44070 [Glycosyl hydrolase family 35 protein] 0.595 -0.018
18 247949_at AT5G57220 CYP81F2, cytochrome P450, family 81, subfamily F, polypeptide 2 0.592 0.380
19 245677_at AT1G56660 unknown 0.587 -0.099
20 266282_at AT2G29220 LecRK-III.1, L-type lectin receptor kinase III.1 0.586 0.085
21 264507_at AT1G09415 NIMIN-3, NIM1-interacting 3 0.566 0.091
22 249983_at AT5G18470 [Curculin-like (mannose-binding) lectin family protein] 0.560 0.361
23 254582_at AT4G19470 [Leucine-rich repeat (LRR) family protein] 0.549 -0.007
24 265732_at AT2G01300 unknown 0.539 0.186
25 260121_at AT1G33910 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.532 0.152
26 259442_at AT1G02310 MAN1, endo-beta-mannanase 1 0.526 0.376
27 260100_at AT1G73177 APC13, anaphase-promoting complex 13, BNS, BONSAI 0.526 -0.030
28 254221_at AT4G23820 [Pectin lyase-like superfamily protein] 0.526 -0.102
29 251755_at AT3G55790 unknown 0.522 0.104
30 245307_at AT4G16770 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.516 -0.044
31 250576_at AT5G08250 [Cytochrome P450 superfamily protein] 0.511 0.277
32 246777_at AT5G27420 ATL31, Arabidopsis toxicos en levadura 31, CNI1, carbon/nitrogen insensitive 1 0.498 0.549
33 249567_at AT5G38020 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.487 0.012
34 253532_at AT4G31570 unknown 0.479 -0.040
35 267384_at AT2G44370 [Cysteine/Histidine-rich C1 domain family protein] 0.474 0.010
36 248686_at AT5G48540 [receptor-like protein kinase-related family protein] 0.468 0.150
37 255274_at AT4G05300 unknown 0.464 -0.100
38 258975_at AT3G01970 ATWRKY45, WRKY DNA-BINDING PROTEIN 45, WRKY45, WRKY DNA-binding protein 45 0.462 0.248
39 267135_at AT2G23430 ICK1, KRP1, KIP-RELATED PROTEIN 1 0.462 0.004
40 263809_at AT2G04570 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.460 -0.278
41 252334_at AT3G48850 MPT2, mitochondrial phosphate transporter 2, PHT3;2, phosphate transporter 3;2 0.459 0.356
42 263617_at AT2G04670 [gypsy-like retrotransposon family, has a 1.2e-313 P-value blast match to GB:AAD27547 polyprotein (Gypsy_Ty3-element) (Oryza sativa subsp. indica)] 0.451 -0.047
43 249169_at AT5G42880 unknown 0.432 -0.077
44 253352_at AT4G33710 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.430 0.078
45 260239_at AT1G74360 [Leucine-rich repeat protein kinase family protein] 0.427 0.101
46 265689_at AT2G24310 unknown 0.425 0.116
47 250648_at AT5G06760 AtLEA4-5, Late Embryogenesis Abundant 4-5, LEA4-5, Late Embryogenesis Abundant 4-5 0.421 0.205
48 256859_at AT3G22940 [F-box associated ubiquitination effector family protein] 0.421 -0.072
49 249634_at AT5G36840 unknown 0.419 -0.018
50 261967_at AT1G36440 unknown 0.418 0.029
51 259809_at AT1G49800 unknown 0.418 0.020
52 247487_at AT5G62150 [peptidoglycan-binding LysM domain-containing protein] 0.417 0.178
53 257840_at AT3G25250 AGC2, AGC2-1, AGC2 kinase 1, AtOXI1, OXI1, oxidative signal-inducible1 0.417 0.650
54 265186_at AT1G23560 unknown 0.408 0.351
55 262737_at AT1G28560 SRD2, SHOOT REDIFFERENTIATION DEFECTIVE 2 0.405 0.136
56 247047_at AT5G66650 unknown 0.400 0.066
57 264549_at AT1G09440 [Protein kinase superfamily protein] 0.399 -0.024
58 256128_at AT1G18140 ATLAC1, LAC1, laccase 1 0.398 -0.138
59 260845_at AT1G17310 [MADS-box transcription factor family protein] 0.397 0.029
60 258796_at AT3G04630 WDL1, WVD2-like 1 0.395 0.027
61 252417_at AT3G47480 [Calcium-binding EF-hand family protein] 0.395 0.055
62 259748_at AT1G71180 [6-phosphogluconate dehydrogenase family protein] 0.394 -0.029
63 266355_at AT2G01400 unknown 0.394 0.203
64 248384_at AT5G51930 [Glucose-methanol-choline (GMC) oxidoreductase family protein] 0.393 0.142
65 260881_at AT1G21550 [Calcium-binding EF-hand family protein] 0.384 0.105
66 257321_at ATMG01130 ORF106F 0.382 0.083
67 256287_at AT3G12190 unknown 0.381 0.074
68 259979_at AT1G76600 unknown 0.381 0.494
69 255881_at AT1G67070 DIN9, DARK INDUCIBLE 9, PMI2, PHOSPHOMANNOSE ISOMERASE 2 0.378 -0.028
70 259428_at AT1G01560 ATMPK11, MAP kinase 11, MPK11, MAP kinase 11 0.377 0.204
71 245545_at AT4G15280 UGT71B5, UDP-glucosyl transferase 71B5 0.370 0.048
72 250162_at AT5G15250 ATFTSH6, FTSH6, FTSH protease 6 0.366 0.281
73 260261_at AT1G68450 PDE337, PIGMENT DEFECTIVE 337 0.365 0.149
74 262821_at AT1G11800 [endonuclease/exonuclease/phosphatase family protein] 0.365 0.043
75 254727_at AT4G13670 PTAC5, plastid transcriptionally active 5 0.361 -0.093
76 255257_at AT4G05050 UBQ11, ubiquitin 11 -1.689 0.043
77 248944_at AT5G45500 [RNI-like superfamily protein] -1.486 -0.013
78 264282_at AT1G61840 [Cysteine/Histidine-rich C1 domain family protein] -1.288 -0.050
79 262148_at AT1G52560 [HSP20-like chaperones superfamily protein] -1.282 1.135
80 266851_at AT2G26820 ATPP2-A3, phloem protein 2-A3, PP2-A3, phloem protein 2-A3 -1.207 -0.075
81 250351_at AT5G12030 AT-HSP17.6A, heat shock protein 17.6A, HSP17.6, HEAT SHOCK PROTEIN 17.6, HSP17.6A, heat shock protein 17.6A -1.188 0.702
82 249812_at AT5G23830 [MD-2-related lipid recognition domain-containing protein] -1.176 0.358
83 248978_at AT5G45070 AtPP2-A8, phloem protein 2-A8, PP2-A8, phloem protein 2-A8 -1.174 -0.127
84 256497_at AT1G31580 CXC750, ECS1 -1.142 -0.017
85 250296_at AT5G12020 HSP17.6II, 17.6 kDa class II heat shock protein -1.109 0.357
86 250142_at AT5G14650 [Pectin lyase-like superfamily protein] -1.074 0.000
87 266294_at AT2G29500 [HSP20-like chaperones superfamily protein] -1.036 0.353
88 260978_at AT1G53540 [HSP20-like chaperones superfamily protein] -1.033 0.345
89 248979_at AT5G45080 AtPP2-A6, phloem protein 2-A6, PP2-A6, phloem protein 2-A6 -1.030 0.040
90 246393_at AT1G58150 unknown -0.946 -0.039
91 247729_at AT5G59530 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.940 0.339
92 254828_at AT4G12550 AIR1, Auxin-Induced in Root cultures 1 -0.932 0.263
93 263150_at AT1G54050 [HSP20-like chaperones superfamily protein] -0.916 -0.120
94 265124_at AT1G55430 [Cysteine/Histidine-rich C1 domain family protein] -0.900 0.065
95 252510_at AT3G46270 [receptor protein kinase-related] -0.887 0.077
96 248332_at AT5G52640 ATHS83, AtHsp90-1, HEAT SHOCK PROTEIN 90-1, ATHSP90.1, heat shock protein 90.1, HSP81-1, HEAT SHOCK PROTEIN 81-1, HSP81.1, HSP83, HEAT SHOCK PROTEIN 83, HSP90.1, heat shock protein 90.1 -0.884 0.097
97 265586_at AT2G19990 PR-1-LIKE, pathogenesis-related protein-1-like -0.867 0.281
98 248048_at AT5G56080 ATNAS2, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 2, NAS2, nicotianamine synthase 2 -0.865 -0.113
99 255546_at AT4G01910 [Cysteine/Histidine-rich C1 domain family protein] -0.859 0.147
100 254979_at AT4G10550 [Subtilase family protein] -0.850 -0.075
101 263777_at AT2G46450 ATCNGC12, cyclic nucleotide-gated channel 12, CNGC12, cyclic nucleotide-gated channel 12 -0.806 -0.204
102 258059_at AT3G29035 ANAC059, Arabidopsis NAC domain containing protein 59, ATNAC3, NAC domain containing protein 3, NAC3, NAC domain containing protein 3, ORS1, ORE1 SISTER1 -0.787 0.214
103 249617_at AT5G37450 [Leucine-rich repeat protein kinase family protein] -0.780 -0.064
104 248212_at AT5G54020 [Cysteine/Histidine-rich C1 domain family protein] -0.771 0.159
105 249866_at AT5G23010 IMS3, 2-ISOPROPYLMALATE SYNTHASE 3, MAM1, methylthioalkylmalate synthase 1 -0.767 -0.063
106 255484_at AT4G02540 [Cysteine/Histidine-rich C1 domain family protein] -0.737 0.109
107 252530_at AT3G46500 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.726 0.029
108 255547_at AT4G01920 [Cysteine/Histidine-rich C1 domain family protein] -0.722 0.068
109 254059_at AT4G25200 ATHSP23.6-MITO, mitochondrion-localized small heat shock protein 23.6, HSP23.6-MITO, mitochondrion-localized small heat shock protein 23.6 -0.721 0.557
110 249185_at AT5G43030 [Cysteine/Histidine-rich C1 domain family protein] -0.707 0.034
111 248415_at AT5G51620 [Uncharacterised protein family (UPF0172)] -0.694 0.161
112 248657_at AT5G48570 ATFKBP65, FKBP65, ROF2 -0.686 0.006
113 256349_at AT1G54890 [Late embryogenesis abundant (LEA) protein-related] -0.686 0.114
114 264640_at AT1G65680 ATEXPB2, expansin B2, ATHEXP BETA 1.4, EXPB2, expansin B2 -0.683 0.107
115 249096_at AT5G43910 [pfkB-like carbohydrate kinase family protein] -0.677 -0.063
116 245674_at AT1G56680 [Chitinase family protein] -0.676 -0.047
117 252490_at AT3G46720 [UDP-Glycosyltransferase superfamily protein] -0.666 -0.006
118 265588_at AT2G19970 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.665 0.166
119 261838_at AT1G16030 Hsp70b, heat shock protein 70B -0.662 0.282
120 245611_at AT4G14390 [Ankyrin repeat family protein] -0.658 -0.026
121 262894_at AT1G59780 [NB-ARC domain-containing disease resistance protein] -0.644 -0.032
122 248416_at AT5G51630 [Disease resistance protein (TIR-NBS-LRR class) family] -0.644 0.082
123 266176_at AT2G02250 AtPP2-B2, phloem protein 2-B2, PP2-B2, phloem protein 2-B2 -0.639 0.201
124 257432_at AT2G21850 [Cysteine/Histidine-rich C1 domain family protein] -0.629 0.064
125 257112_at AT3G20120 CYP705A21, cytochrome P450, family 705, subfamily A, polypeptide 21 -0.615 -0.109
126 252202_at AT3G50300 [HXXXD-type acyl-transferase family protein] -0.615 -0.102
127 265530_at AT2G06050 AtOPR3, DDE1, DELAYED DEHISCENCE 1, OPR3, oxophytodienoate-reductase 3 -0.612 0.120
128 266838_at AT2G25980 [Mannose-binding lectin superfamily protein] -0.601 0.067
129 260492_at AT2G41850 ADPG2, ARABIDOPSIS DEHISCENCE ZONE POLYGALACTURONASE 2, PGAZAT, polygalacturonase abscission zone A. thaliana -0.601 0.001
130 263800_at AT2G24600 [Ankyrin repeat family protein] -0.601 -0.025
131 249562_at AT5G38350 [Disease resistance protein (NBS-LRR class) family] -0.595 0.127
132 249897_at AT5G22550 unknown -0.594 0.035
133 254409_at AT4G21400 CRK28, cysteine-rich RLK (RECEPTOR-like protein kinase) 28 -0.594 -0.153
134 248318_at AT5G52690 [Copper transport protein family] -0.594 0.060
135 248077_at AT5G55770 [Cysteine/Histidine-rich C1 domain family protein] -0.587 -0.011
136 250755_at AT5G05750 [DNAJ heat shock N-terminal domain-containing protein] -0.587 0.191
137 261957_at AT1G64660 ATMGL, methionine gamma-lyase, MGL, methionine gamma-lyase -0.585 -0.162
138 266590_at AT2G46240 ATBAG6, ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 6, BAG6, BCL-2-associated athanogene 6 -0.581 0.159
139 245838_at AT1G58410 [Disease resistance protein (CC-NBS-LRR class) family] -0.573 0.026
140 250433_at AT5G10400 H3.1, histone 3.1 -0.549 -0.027
141 245196_at AT1G67750 [Pectate lyase family protein] -0.547 -0.204
142 264434_at AT1G10340 [Ankyrin repeat family protein] -0.545 -0.188
143 254264_at AT4G23510 [Disease resistance protein (TIR-NBS-LRR class) family] -0.536 -0.026
144 256684_at AT3G32040 [Terpenoid synthases superfamily protein] -0.532 0.186
145 250942_at AT5G03350 [Legume lectin family protein] -0.529 -0.180
146 247988_at AT5G56910 [Proteinase inhibitor I25, cystatin, conserved region] -0.521 0.038
147 258769_at AT3G10870 ATMES17, ARABIDOPSIS THALIANA METHYL ESTERASE 17, MES17, methyl esterase 17 -0.519 -0.005
148 253132_at AT4G35580 CBNAC, calmodulin-binding NAC protein, NTL9, NAC transcription factor-like 9 -0.514 -0.098
149 251934_at AT3G54070 [Ankyrin repeat family protein] -0.512 0.071