4.0:Information of module
Col-0 5dpi
In comparison with Shoot apex inflorescence (after bolting) help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006508 proteolysis BP 4.122e-03
GO:0030163 protein catabolic process BP 6.760e-03
GO:0009057 macromolecule catabolic process BP 1.378e-02
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0048825 cotyledon development BP 3.709e-04
GO:0007389 pattern specification process BP 4.285e-04
GO:0009887 organ morphogenesis BP 4.854e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Col-0 5dpi		 Log2 signal ratio
Shoot apex inflorescence (after bolting)
1 264514_at AT1G09500 [NAD(P)-binding Rossmann-fold superfamily protein] 0.549 -0.283
2 254396_at AT4G21680 AtNPF7.2, NPF7.2, NRT1/ PTR family 7.2, NRT1.8, NITRATE TRANSPORTER 1.8 0.275 -0.269
3 251895_at AT3G54420 ATCHITIV, CHITINASE CLASS IV, ATEP3, homolog of carrot EP3-3 chitinase, CHIV, EP3, homolog of carrot EP3-3 chitinase 0.254 -0.653
4 259846_at AT1G72140 [Major facilitator superfamily protein] 0.198 -0.208
5 255727_at AT1G25510 [Eukaryotic aspartyl protease family protein] 0.196 0.580
6 261844_at AT1G15940 [Tudor/PWWP/MBT superfamily protein] 0.194 -0.045
7 254864_at AT4G12180 [non-LTR retrotransposon family (LINE), has a 2.2e-28 P-value blast match to GB:NP_038605 L1 repeat, Tf subfamily, member 30 (LINE-element) (Mus musculus)] 0.192 -0.204
8 248006_at AT5G56250 HAP8, HAPLESS 8 0.189 -0.157
9 264861_at AT1G24320 [Six-hairpin glycosidases superfamily protein] 0.187 -1.090
10 262549_at AT1G31290 AGO3, ARGONAUTE 3 0.183 0.299
11 253721_at AT4G29250 [HXXXD-type acyl-transferase family protein] 0.176 -0.252
12 259605_at AT1G27910 ATPUB45, ARABIDOPSIS THALIANA PLANT U-BOX 45, PUB45, plant U-box 45 0.173 -0.289
13 265802_at AT2G35733 unknown 0.167 -1.385
14 246555_at AT5G15470 GAUT14, galacturonosyltransferase 14 0.167 0.045
15 264278_at AT1G60130 [Mannose-binding lectin superfamily protein] 0.163 -1.018
16 260568_at AT2G43570 CHI, chitinase, putative 0.160 -0.196
17 250571_at AT5G08200 [peptidoglycan-binding LysM domain-containing protein] 0.156 -0.560
18 245509_at AT4G15730 [CW-type Zinc Finger] 0.156 0.085
19 248857_at AT5G46640 AHL8, AT-hook motif nuclear localized protein 8 0.153 -0.394
20 250541_at AT5G09520 PELPK2, Pro-Glu-Leu|Ile|Val-Pro-Lys 2 0.152 -1.154
21 248974_at AT5G45060 [Disease resistance protein (TIR-NBS-LRR class) family] 0.149 -0.483
22 261006_at AT1G26410 [FAD-binding Berberine family protein] 0.144 -0.063
23 255533_at AT4G02180 [DC1 domain-containing protein] 0.142 -0.106
24 257195_at AT3G23680 [F-box associated ubiquitination effector family protein] 0.137 -1.331
25 252767_at AT3G42830 [RING/U-box superfamily protein] 0.137 -0.523
26 246624_at AT1G48910 YUC10, YUCCA 10 0.137 -0.782
27 255861_at AT2G30290 AtVSR2, BP80-1;2, binding protein of 80 kDa 1;2, VSR1;2, VACUOLAR SORTING RECEPTOR 1;2, VSR2, VACUOLAR SORTING RECEPTOR 2 0.136 -0.531
28 266854_at AT2G26940 C2H2-type zinc finger family protein 0.135 0.225
29 253152_at AT4G35690 unknown 0.135 -1.057
30 247129_at AT5G66150 [Glycosyl hydrolase family 38 protein] 0.134 -0.739
31 254582_at AT4G19470 [Leucine-rich repeat (LRR) family protein] 0.133 -0.790
32 255402_at AT4G03205 hemf2 0.132 -0.102
33 262739_at AT1G28650 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.130 -0.203
34 256571_at AT3G30730 unknown 0.129 -1.177
35 264565_at AT1G05280 unknown 0.129 -0.778
36 261890_at AT1G80970 [XH domain-containing protein] 0.129 -0.422
37 258479_at AT3G02440 TBL20, TRICHOME BIREFRINGENCE-LIKE 20 0.128 -0.069
38 257375_at AT2G38640 unknown 0.126 -1.086
39 260242_at AT1G63650 AtEGL3, ATMYC-2, EGL1, EGL3, ENHANCER OF GLABRA 3 0.126 0.360
40 260838_at AT1G43680 unknown 0.125 -1.026
41 254912_at AT4G11230 [Riboflavin synthase-like superfamily protein] 0.125 -0.171
42 250153_at AT5G15130 ATWRKY72, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 72, WRKY72, WRKY DNA-binding protein 72 0.125 -0.457
43 260901_at AT1G21430 YUC11 0.123 -0.798
44 257874_at AT3G17110 [pseudogene] 0.123 0.015
45 262140_at AT1G52470 [alpha/beta-Hydrolases superfamily protein] 0.123 -0.286
46 247800_at AT5G58570 unknown 0.122 0.147
47 266645_at AT2G29880 unknown 0.122 -1.611
48 253423_at AT4G32280 IAA29, indole-3-acetic acid inducible 29 -0.690 -0.730
49 248040_at AT5G55970 [RING/U-box superfamily protein] -0.312 -0.230
50 247474_at AT5G62280 unknown -0.235 -0.499
51 261382_at AT1G05470 CVP2, COTYLEDON VASCULAR PATTERN 2 -0.228 -0.272
52 250277_at AT5G12940 [Leucine-rich repeat (LRR) family protein] -0.228 -0.410
53 254644_at AT4G18510 CLE2, CLAVATA3/ESR-related 2 -0.218 -0.085
54 247457_at AT5G62170 TRM25, TON1 Recruiting Motif 25 -0.205 -0.384
55 248801_at AT5G47370 HAT2 -0.191 0.153
56 267238_at AT2G44130 KMD3, KISS ME DEADLY 3 -0.187 -0.512
57 245839_at AT1G58390 [Disease resistance protein (CC-NBS-LRR class) family] -0.184 -1.101
58 262092_at AT1G56150 SAUR71, SMALL AUXIN UPREGULATED 71 -0.181 -0.753
59 265279_at AT2G28460 [Cysteine/Histidine-rich C1 domain family protein] -0.169 -0.713
60 257331_at ATMG01330 ORF107H -0.168 -1.287
61 264525_at AT1G10060 ATBCAT-1, branched-chain amino acid transaminase 1, BCAT-1, branched-chain amino acid transaminase 1, BCAT1, branched-chain amino acid transferase 1 -0.167 0.101
62 252577_at AT3G45460 [IBR domain containing protein] -0.166 -1.428
63 257636_at AT3G26200 CYP71B22, cytochrome P450, family 71, subfamily B, polypeptide 22 -0.165 0.396
64 256893_x_at AT3G30660 unknown -0.164 0.083
65 246562_at AT5G15580 LNG1, LONGIFOLIA1, TRM2, TON1 Recruiting Motif 2 -0.161 0.443
66 265539_at AT2G15830 unknown -0.159 -0.497
67 256919_at AT3G18970 MEF20, mitochondrial editing factor 20 -0.153 -0.241
68 257275_at AT3G14450 CID9, CTC-interacting domain 9 -0.153 -0.257
69 258629_at AT3G02850 SKOR, STELAR K+ outward rectifier -0.153 -0.448
70 248019_at AT5G56480 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.150 -0.984
71 266753_at AT2G46990 IAA20, indole-3-acetic acid inducible 20 -0.147 -0.237
72 261491_at AT1G14350 AtMYB124, myb domain protein 124, FLP, FOUR LIPS, MYB124 -0.145 -0.082
73 265072_at AT1G55580 LAS, Lateral Suppressor, SCL18, SCARECROW-LIKE 18 -0.143 0.073
74 246530_at AT5G15725 GLV9, GOLVEN 9 -0.142 -1.064
75 258275_at AT3G15760 unknown -0.141 -0.328
76 246952_at AT5G04820 ATOFP13, ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 13, OFP13, ovate family protein 13 -0.141 0.953
77 263416_at AT2G17170 [Protein kinase superfamily protein] -0.140 -1.044
78 256640_at AT3G32260 [Nucleic acid-binding proteins superfamily] -0.138 -0.808
79 264210_at AT1G22640 ATMYB3, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 3, MYB3, myb domain protein 3 -0.137 -0.296
80 249109_at AT5G43700 ATAUX2-11, AUXIN INDUCIBLE 2-11, IAA4, indole-3-acetic acid inducible 4 -0.137 0.475
81 249941_at AT5G22270 unknown -0.135 -0.476
82 251793_at AT3G55580 [Regulator of chromosome condensation (RCC1) family protein] -0.133 -0.788
83 247562_at AT5G61120 unknown -0.133 0.614
84 261710_at AT1G32730 unknown -0.132 0.202
85 254614_at AT4G19191 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.131 0.168
86 263027_at AT1G24010 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.131 -0.799
87 259921_at AT1G72540 [Protein kinase superfamily protein] -0.131 -0.748
88 261766_at AT1G15580 ATAUX2-27, AUX2-27, AUXIN-INDUCIBLE 2-27, IAA5, indole-3-acetic acid inducible 5 -0.131 -0.907
89 256621_at AT3G24450 [Heavy metal transport/detoxification superfamily protein ] -0.131 0.746
90 256695_at AT3G32090 [WRKY family transcription factor] -0.129 -1.547
91 247074_at AT5G66590 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.126 0.515
92 252437_at AT3G47380 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.125 -0.827
93 245322_at AT4G14815 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.124 -0.857