4.0:Information of module
WT seedlings MV
In comparison with ckh1 CK0 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010200 response to chitin BP 2.068e-65
GO:0010243 response to organonitrogen compound BP 4.513e-64
GO:1901698 response to nitrogen compound BP 8.914e-49
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0071365 cellular response to auxin stimulus BP 3.574e-05
GO:0009734 auxin-activated signaling pathway BP 1.738e-04
GO:0009926 auxin polar transport BP 2.444e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
WT seedlings MV		 Log2 signal ratio
ckh1 CK0
1 246293_at AT3G56710 SIB1, sigma factor binding protein 1 0.940 0.088
2 256589_at AT3G28740 CYP81D11, cytochrome P450, family 81, subfamily D, polypeptide 11 0.800 -0.010
3 250826_at AT5G05220 unknown 0.798 0.011
4 266294_at AT2G29500 [HSP20-like chaperones superfamily protein] 0.791 0.223
5 253046_at AT4G37370 CYP81D8, cytochrome P450, family 81, subfamily D, polypeptide 8 0.776 0.306
6 249770_at AT5G24110 ATWRKY30, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 30, WRKY30, WRKY DNA-binding protein 30 0.730 0.129
7 246464_at AT5G16980 [Zinc-binding dehydrogenase family protein] 0.724 0.125
8 263150_at AT1G54050 [HSP20-like chaperones superfamily protein] 0.709 0.242
9 256044_at AT1G07160 [Protein phosphatase 2C family protein] 0.705 0.120
10 265501_at AT2G15490 UGT73B4, UDP-glycosyltransferase 73B4 0.694 0.154
11 261838_at AT1G16030 Hsp70b, heat shock protein 70B 0.693 0.291
12 257918_at AT3G23230 AtERF98, AtTDR1, ERF98, Ethylene Response Factor 98, TDR1, Transcriptional Regulator of Defense Response 1 0.687 0.047
13 253832_at AT4G27654 unknown 0.679 0.100
14 251114_at AT5G01380 [Homeodomain-like superfamily protein] 0.670 0.019
15 266590_at AT2G46240 ATBAG6, ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 6, BAG6, BCL-2-associated athanogene 6 0.658 0.374
16 261443_at AT1G28480 GRX480, roxy19 0.628 0.341
17 253259_at AT4G34410 RRTF1, redox responsive transcription factor 1 0.612 0.247
18 250182_at AT5G14470 AtGALK2, GALK2, galactokinase 2 0.606 0.044
19 265675_at AT2G32120 HSP70T-2, heat-shock protein 70T-2 0.599 0.232
20 258930_at AT3G10040 [sequence-specific DNA binding transcription factors] 0.588 0.094
21 248434_at AT5G51440 [HSP20-like chaperones superfamily protein] 0.586 0.270
22 250781_at AT5G05410 DREB2, DEHYDRATION-RESPONSIVE ELEMENT BINDING PROTEIN 2, DREB2A, DRE-binding protein 2A 0.585 0.028
23 260248_at AT1G74310 ATHSP101, heat shock protein 101, HOT1, HSP101, heat shock protein 101 0.578 0.323
24 265197_at AT2G36750 UGT73C1, UDP-glucosyl transferase 73C1 0.536 0.014
25 253859_at AT4G27657 unknown 0.535 0.024
26 254443_at AT4G21070 ATBRCA1, ARABIDOPSIS THALIANA BREAST CANCER SUSCEPTIBILITY1, BRCA1, breast cancer susceptibility1 0.524 0.117
27 258487_at AT3G02550 LBD41, LOB domain-containing protein 41 0.519 0.074
28 264314_at AT1G70420 unknown 0.519 0.334
29 267451_at AT2G33710 [Integrase-type DNA-binding superfamily protein] 0.517 0.076
30 255542_at AT4G01860 [Transducin family protein / WD-40 repeat family protein] 0.514 0.067
31 261564_at AT1G01720 ANAC002, Arabidopsis NAC domain containing protein 2, ATAF1 0.488 0.071
32 250796_at AT5G05300 unknown 0.487 0.165
33 263475_at AT2G31945 unknown 0.485 0.104
34 257748_at AT3G18710 ATPUB29, ARABIDOPSIS THALIANA PLANT U-BOX 29, PUB29, plant U-box 29 0.483 -0.258
35 249836_at AT5G23420 HMGB6, high-mobility group box 6 0.465 0.065
36 263182_at AT1G05575 unknown 0.461 0.350
37 257840_at AT3G25250 AGC2, AGC2-1, AGC2 kinase 1, AtOXI1, OXI1, oxidative signal-inducible1 0.461 0.110
38 255622_at AT4G01070 GT72B1, UGT72B1, UDP-GLUCOSE-DEPENDENT GLUCOSYLTRANSFERASE 72 B1 0.450 -0.379
39 258707_at AT3G09480 [Histone superfamily protein] 0.449 0.223
40 259010_at AT3G07340 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.449 -0.293
41 246584_at AT5G14730 unknown 0.446 -0.186
42 265725_at AT2G32030 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] 0.446 0.220
43 254922_at AT4G11370 RHA1A, RING-H2 finger A1A 0.434 0.029
44 250550_at AT5G07870 [HXXXD-type acyl-transferase family protein] 0.432 0.151
45 245250_at AT4G17490 ATERF6, ethylene responsive element binding factor 6, ERF-6-6, ERF6, ethylene responsive element binding factor 6 0.425 0.243
46 251774_at AT3G55840 [Hs1pro-1 protein] 0.422 0.093
47 247655_at AT5G59820 AtZAT12, RHL41, RESPONSIVE TO HIGH LIGHT 41, ZAT12 0.403 0.040
48 266841_at AT2G26150 ATHSFA2, heat shock transcription factor A2, HSFA2, heat shock transcription factor A2 0.402 0.332
49 261892_at AT1G80840 ATWRKY40, WRKY40, WRKY DNA-binding protein 40 0.399 0.198
50 253737_at AT4G28703 [RmlC-like cupins superfamily protein] 0.396 -0.026
51 259705_at AT1G77450 anac032, NAC domain containing protein 32, NAC032, NAC domain containing protein 32 0.394 -0.054
52 246858_at AT5G25930 [Protein kinase family protein with leucine-rich repeat domain] 0.391 0.104
53 266296_at AT2G29420 ATGSTU7, glutathione S-transferase tau 7, GST25, GLUTATHIONE S-TRANSFERASE 25, GSTU7, glutathione S-transferase tau 7 0.389 0.041
54 259037_at AT3G09350 Fes1A, Fes1A 0.388 0.138
55 247351_at AT5G63790 ANAC102, NAC domain containing protein 102, NAC102, NAC domain containing protein 102 0.385 0.019
56 257670_at AT3G20340 unknown 0.383 -0.077
57 248164_at AT5G54490 PBP1, pinoid-binding protein 1 0.380 0.050
58 265695_at AT2G24490 ATRPA2, ATRPA32A, ROR1, SUPPRESSOR OF ROS1, RPA2, replicon protein A2, RPA32A 0.377 0.003
59 252825_at AT4G39890 AtRABH1c, RAB GTPase homolog H1C, RABH1c, RAB GTPase homolog H1C 0.370 0.121
60 248821_at AT5G47070 [Protein kinase superfamily protein] 0.369 0.201
61 252272_at AT3G49670 BAM2, BARELY ANY MERISTEM 2 -0.407 -0.040
62 245861_at AT5G28300 AtGT2L, GT2L, GT-2Like protein -0.386 0.021
63 247980_at AT5G56860 GATA21, GATA TRANSCRIPTION FACTOR 21, GNC, GATA, nitrate-inducible, carbon metabolism-involved -0.354 0.015
64 259994_at AT1G68130 AtIDD14, indeterminate(ID)-domain 14, IDD14, indeterminate(ID)-domain 14, IDD14alpha, IDD14beta -0.334 0.046
65 254631_at AT4G18610 LSH9, LIGHT SENSITIVE HYPOCOTYLS 9 -0.317 -0.184
66 262263_at AT1G70940 ATPIN3, ARABIDOPSIS PIN-FORMED 3, PIN3, PIN-FORMED 3 -0.309 -0.002
67 261500_at AT1G28400 unknown -0.294 -0.063
68 266078_at AT2G40670 ARR16, response regulator 16, RR16, response regulator 16 -0.294 0.017
69 246991_at AT5G67400 RHS19, root hair specific 19 -0.288 0.008
70 261768_at AT1G15550 ATGA3OX1, ARABIDOPSIS THALIANA GIBBERELLIN 3 BETA-HYDROXYLASE 1, GA3OX1, gibberellin 3-oxidase 1, GA4, GA REQUIRING 4 -0.284 -0.264
71 250255_at AT5G13730 SIG4, sigma factor 4, SIGD -0.282 0.031
72 264901_at AT1G23090 AST91, sulfate transporter 91, SULTR3;3 -0.280 -0.032
73 266797_at AT2G22840 AtGRF1, growth-regulating factor 1, GRF1, growth-regulating factor 1 -0.277 0.098
74 264455_at AT1G10330 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.276 0.077
75 245947_at AT5G19530 ACL5, ACAULIS 5 -0.271 -0.050
76 262349_at AT2G48130 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.263 -0.295
77 246562_at AT5G15580 LNG1, LONGIFOLIA1, TRM2, TON1 Recruiting Motif 2 -0.261 0.132
78 266824_at AT2G22800 HAT9 -0.253 -0.018
79 261451_at AT1G21060 unknown -0.252 0.016
80 266996_at AT2G34490 CYP710A2, cytochrome P450, family 710, subfamily A, polypeptide 2 -0.243 -0.115
81 254834_at AT4G12300 CYP706A4, cytochrome P450, family 706, subfamily A, polypeptide 4 -0.243 -0.074
82 248208_at AT5G53980 ATHB52, homeobox protein 52, HB52, homeobox protein 52 -0.235 -0.209
83 263738_at AT1G60060 [Serine/threonine-protein kinase WNK (With No Lysine)-related] -0.233 0.035
84 266322_at AT2G46690 SAUR32, SMALL AUXIN UPREGULATED RNA 32 -0.233 -0.524
85 261146_at AT1G19620 unknown -0.228 -0.012
86 262096_at AT1G56010 anac021, Arabidopsis NAC domain containing protein 21, ANAC022, Arabidopsis NAC domain containing protein 22, NAC1, NAC domain containing protein 1 -0.228 -0.197
87 247668_at AT5G60100 APRR3, pseudo-response regulator 3, PRR3, pseudo-response regulator 3 -0.227 0.019
88 245933_at AT5G09320 VPS9B -0.221 0.069
89 246891_at AT5G25490 [Ran BP2/NZF zinc finger-like superfamily protein] -0.220 0.267
90 261335_at AT1G44800 SIAR1, Siliques Are Red 1, UMAMIT18, Usually multiple acids move in and out Transporters 18 -0.220 -0.323
91 261491_at AT1G14350 AtMYB124, myb domain protein 124, FLP, FOUR LIPS, MYB124 -0.218 -0.043
92 249986_at AT5G18460 unknown -0.217 -0.069
93 255596_at AT4G01720 AtWRKY47, WRKY47 -0.210 -0.057
94 258362_at AT3G14280 unknown -0.209 -0.054
95 261203_at AT1G12845 unknown -0.208 0.076
96 261012_at AT1G26600 CLE9, CLAVATA3/ESR-RELATED 9 -0.207 0.087
97 252148_at AT3G51280 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.199 0.079
98 253746_at AT4G29100 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.198 -0.143
99 247087_at AT5G66330 [Leucine-rich repeat (LRR) family protein] -0.195 0.039
100 247628_at AT5G60400 unknown -0.192 -0.021
101 263467_at AT2G31730 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.188 -0.052
102 249779_at AT5G24230 [Lipase class 3-related protein] -0.184 -0.010
103 255913_at AT1G66980 GDPDL2, Glycerophosphodiester phosphodiesterase (GDPD) like 2, SNC4, suppressor of npr1-1 constitutive 4 -0.183 -0.005
104 247992_at AT5G56520 unknown -0.182 0.018
105 253822_at AT4G28410 RSA1, Root System Architecture 1 -0.179 0.035
106 257134_at AT3G12870 unknown -0.178 0.064
107 262286_at AT1G68585 unknown -0.178 -0.164
108 248715_at AT5G48290 [Heavy metal transport/detoxification superfamily protein ] -0.177 0.069
109 259240_at AT3G11590 unknown -0.176 0.037
110 255015_at AT4G09980 EMB1691, EMBRYO DEFECTIVE 1691 -0.176 0.070
111 256395_at AT3G06120 MUTE, MUTE -0.176 0.090
112 266229_at AT2G28840 XBAT31, XB3 ortholog 1 in Arabidopsis thaliana -0.172 -0.000
113 254561_at AT4G19160 unknown -0.168 -0.078
114 264987_at AT1G27030 unknown -0.168 -0.780
115 267591_at AT2G39705 DVL11, DEVIL 11, RTFL8, ROTUNDIFOLIA like 8 -0.167 -0.233
116 253500_at AT4G31920 ARR10, response regulator 10, RR10, response regulator 10 -0.167 -0.072
117 248908_at AT5G45800 MEE62, maternal effect embryo arrest 62 -0.166 -0.237
118 251744_at AT3G56010 unknown -0.166 0.047
119 253525_at AT4G31330 unknown -0.163 0.055