4.0:Information of module
Inflorescences Trp1
In comparison with NAA 6h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:1900864 mitochondrial RNA modification BP 8.328e-03
GO:0000959 mitochondrial RNA metabolic process BP 1.009e-02
GO:0009799 specification of symmetry BP 1.559e-02
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0048508 embryonic meristem development BP 4.148e-03
GO:0009630 gravitropism BP 9.614e-03
GO:0009620 response to fungus BP 1.121e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Inflorescences Trp1		 Log2 signal ratio
NAA 6h
1 245673_at AT1G56690 [Pentatricopeptide repeat (PPR) superfamily protein] 0.141 0.338
2 249886_at AT5G22320 [Leucine-rich repeat (LRR) family protein] 0.129 0.333
3 265195_at AT2G36730 [Pentatricopeptide repeat (PPR) superfamily protein] 0.120 0.351
4 257740_at AT3G27330 [zinc finger (C3HC4-type RING finger) family protein] 0.119 0.566
5 247447_at AT5G62730 [Major facilitator superfamily protein] 0.118 0.098
6 264806_at AT1G08610 [Pentatricopeptide repeat (PPR) superfamily protein] 0.116 0.462
7 252362_at AT3G48500 PDE312, PIGMENT DEFECTIVE 312, PTAC10, PLASTID TRANSCRIPTIONALLY ACTIVE 10, TAC10 0.109 0.140
8 254664_at AT4G18300 [Trimeric LpxA-like enzyme] 0.105 0.059
9 259422_at AT1G13810 [Restriction endonuclease, type II-like superfamily protein] 0.105 0.428
10 251278_at AT3G61780 emb1703, embryo defective 1703 0.103 0.147
11 246246_at AT4G37170 [Pentatricopeptide repeat (PPR) superfamily protein] 0.102 0.381
12 256976_at AT3G21020 [copia-like retrotransposon family, has a 5.4e-14 P-value blast match to gb|AAO73529.1| gag-pol polyprotein (Glycine max) (SIRE1) (Ty1_Copia-family)] 0.100 0.054
13 248871_at AT5G46680 [Pentatricopeptide repeat (PPR-like) superfamily protein] 0.099 0.210
14 254661_at AT4G18260 [Cytochrome b561/ferric reductase transmembrane protein family] 0.095 -0.006
15 263200_at AT1G05600 EMB3101, EMBRYO DEFECTIVE 3101 0.086 0.073
16 260620_at AT1G08070 EMB3102, EMBRYO DEFECTIVE 3102, OTP82, ORGANELLE TRANSCRIPT PROCESSING 82 0.086 0.159
17 266406_at AT2G38570 unknown 0.085 0.089
18 250040_at AT5G18390 [Pentatricopeptide repeat (PPR) superfamily protein] 0.084 0.055
19 258317_at AT3G22670 [Pentatricopeptide repeat (PPR) superfamily protein] 0.083 0.400
20 256919_at AT3G18970 MEF20, mitochondrial editing factor 20 0.073 0.088
21 261698_at AT1G32630 unknown 0.069 -0.014
22 264994_at AT1G67270 [Zinc-finger domain of monoamine-oxidase A repressor R1 protein] 0.068 -0.036
23 251670_at AT3G57190 PrfB3, peptide chain release factor 3 0.068 -0.210
24 249513_at AT5G38460 [ALG6, ALG8 glycosyltransferase family] 0.065 0.052
25 267438_at AT2G19050 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.131 0.022
26 252111_at AT3G51570 [Disease resistance protein (TIR-NBS-LRR class) family] -0.121 -0.002
27 256169_at AT1G51800 IOS1, IMPAIRED OOMYCETE SUSCEPTIBILITY 1 -0.119 0.102
28 250620_at AT5G07190 ATS3, seed gene 3 -0.114 -0.036
29 247592_at AT5G60780 ATNRT2.3, ARABIDOPSIS THALIANA NITRATE TRANSPORTER 2.3, NRT2.3, nitrate transporter 2.3 -0.111 0.052
30 248732_at AT5G48070 ATXTH20, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 20, XTH20, xyloglucan endotransglucosylase/hydrolase 20 -0.108 -0.110
31 250840_at AT5G04650 transposable element gene -0.107 -0.018
32 255408_at AT4G03490 [Ankyrin repeat family protein] -0.106 0.035
33 259953_at AT1G74810 BOR5, REQUIRES HIGH BORON 5 -0.104 0.189
34 253423_at AT4G32280 IAA29, indole-3-acetic acid inducible 29 -0.103 1.277
35 267487_at AT2G19100 [non-LTR retrotransposon family (LINE), has a 3.2e-33 P-value blast match to GB:AAB41224 ORF2 (LINE-element) (Rattus norvegicus)] -0.100 0.003
36 265565_at AT2G05610 [gypsy-like retrotransposon family, has a 1.2e-179 P-value blast match to GB:AAD27547 polyprotein (Gypsy_Ty3-element) (Oryza sativa subsp. indica)] -0.098 0.060
37 263285_at AT2G36120 DOT1, DEFECTIVELY ORGANIZED TRIBUTARIES 1 -0.097 -0.523
38 262805_at AT1G20900 AHL27, AT-hook motif nuclear-localized protein 27, ESC, ESCAROLA, ORE7, ORESARA 7 -0.097 0.075
39 257165_at AT3G24330 [O-Glycosyl hydrolases family 17 protein] -0.095 -0.023
40 255627_at AT4G00955 unknown -0.093 0.041
41 265497_at AT2G15720 [non-LTR retrotransposon family (LINE), has a 5.4e-35 P-value blast match to GB:AAB41224 ORF2 (LINE-element) (Rattus norvegicus)] -0.093 0.005
42 259540_at AT1G20640 NLP4, NIN-like protein 4 -0.091 -0.039
43 260623_at AT1G08090 ACH1, ATNRT2.1, NITRATE TRANSPORTER 2.1, ATNRT2:1, nitrate transporter 2:1, LIN1, LATERAL ROOT INITIATION 1, NRT2, NITRATE TRANSPORTER 2, NRT2.1, NITRATE TRANSPORTER 2.1, NRT2:1, nitrate transporter 2:1, NRT2;1AT -0.091 0.669
44 254155_at AT4G24480 [Protein kinase superfamily protein] -0.091 -0.235
45 259837_at AT1G52180 [Aquaporin-like superfamily protein] -0.090 0.040
46 247369_at AT5G63340 unknown -0.090 0.044
47 266211_at AT2G06820 unknown -0.090 0.018