4.0:Information of module
Rose Bengal 0.5 uM
In comparison with GO5; 8h switch to ambient CO2 concentrations; help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010200 response to chitin BP 7.279e-40
GO:0010243 response to organonitrogen compound BP 3.566e-39
GO:1901698 response to nitrogen compound BP 1.843e-32
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0051273 beta-glucan metabolic process BP 2.315e-09
GO:0034976 response to endoplasmic reticulum stress BP 1.904e-08
GO:0005975 carbohydrate metabolic process BP 1.037e-07
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Rose Bengal 0.5 uM		 Log2 signal ratio
GO5; 8h switch to ambient CO2 concentrations;
1 250781_at AT5G05410 DREB2, DEHYDRATION-RESPONSIVE ELEMENT BINDING PROTEIN 2, DREB2A, DRE-binding protein 2A 0.887 0.164
2 258947_at AT3G01830 [Calcium-binding EF-hand family protein] 0.864 0.420
3 250351_at AT5G12030 AT-HSP17.6A, heat shock protein 17.6A, HSP17.6, HEAT SHOCK PROTEIN 17.6, HSP17.6A, heat shock protein 17.6A 0.860 -0.061
4 249197_at AT5G42380 CML37, calmodulin like 37 0.826 0.353
5 245755_at AT1G35210 unknown 0.798 0.461
6 266821_at AT2G44840 ATERF13, ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13, EREBP, ERF13, ethylene-responsive element binding factor 13 0.739 -0.107
7 251336_at AT3G61190 BAP1, BON association protein 1 0.729 0.148
8 248434_at AT5G51440 [HSP20-like chaperones superfamily protein] 0.722 1.113
9 263150_at AT1G54050 [HSP20-like chaperones superfamily protein] 0.711 -0.207
10 258606_at AT3G02840 [ARM repeat superfamily protein] 0.702 0.503
11 248799_at AT5G47230 ATERF-5, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR- 5, ATERF5, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 5, AtMACD1, ERF102, ERF5, ethylene responsive element binding factor 5 0.680 0.207
12 260804_at AT1G78410 [VQ motif-containing protein] 0.608 0.374
13 263182_at AT1G05575 unknown 0.605 0.352
14 262382_at AT1G72920 [Toll-Interleukin-Resistance (TIR) domain family protein] 0.586 0.032
15 257482_x_at AT1G27820 [Polynucleotidyl transferase, ribonuclease H-like superfamily protein] 0.549 0.003
16 267451_at AT2G33710 [Integrase-type DNA-binding superfamily protein] 0.510 0.511
17 265327_at AT2G18210 unknown 0.496 -0.050
18 260881_at AT1G21550 [Calcium-binding EF-hand family protein] 0.493 -0.010
19 252567_at AT3G46070 [C2H2-type zinc finger family protein] 0.481 0.004
20 251705_at AT3G56400 ATWRKY70, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 70, WRKY70, WRKY DNA-binding protein 70 0.473 0.052
21 265276_at AT2G28400 unknown 0.469 -0.035
22 264202_at AT1G22810 [Integrase-type DNA-binding superfamily protein] 0.465 -0.008
23 257840_at AT3G25250 AGC2, AGC2-1, AGC2 kinase 1, AtOXI1, OXI1, oxidative signal-inducible1 0.462 0.785
24 262656_at AT1G14200 [RING/U-box superfamily protein] 0.459 -0.053
25 245250_at AT4G17490 ATERF6, ethylene responsive element binding factor 6, ERF-6-6, ERF6, ethylene responsive element binding factor 6 0.453 0.253
26 245711_at AT5G04340 C2H2, CZF2, COLD INDUCED ZINC FINGER PROTEIN 2, ZAT6, zinc finger of Arabidopsis thaliana 6 0.446 0.197
27 256518_at AT1G66080 unknown 0.443 -0.296
28 265725_at AT2G32030 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] 0.440 0.676
29 262549_at AT1G31290 AGO3, ARGONAUTE 3 0.432 0.028
30 249485_at AT5G39020 [Malectin/receptor-like protein kinase family protein] 0.424 0.146
31 252681_at AT3G44350 anac061, NAC domain containing protein 61, NAC061, NAC domain containing protein 61 0.418 -0.065
32 258516_at AT3G06490 AtMYB108, myb domain protein 108, BOS1, BOTRYTIS-SUSCEPTIBLE1, MYB108, myb domain protein 108 0.414 0.036
33 256245_at AT3G12580 ATHSP70, ARABIDOPSIS HEAT SHOCK PROTEIN 70, HSP70, heat shock protein 70 0.413 0.095
34 261564_at AT1G01720 ANAC002, Arabidopsis NAC domain containing protein 2, ATAF1 0.409 0.078
35 262383_at AT1G72940 [Toll-Interleukin-Resistance (TIR) domain-containing protein] 0.387 0.150
36 262072_at AT1G59590 ZCF37 0.384 0.326
37 266092_at AT2G37880 unknown 0.378 -0.060
38 246293_at AT3G56710 SIB1, sigma factor binding protein 1 0.377 0.113
39 264866_at AT1G24140 [Matrixin family protein] 0.365 0.401
40 247655_at AT5G59820 AtZAT12, RHL41, RESPONSIVE TO HIGH LIGHT 41, ZAT12 0.356 0.339
41 248286_at AT5G52870 MAKR5, MEMBRANE-ASSOCIATED KINASE REGULATOR 5 0.355 -0.007
42 264314_at AT1G70420 unknown 0.355 0.030
43 252679_at AT3G44260 AtCAF1a, CCR4- associated factor 1a, CAF1a, CCR4- associated factor 1a 0.352 0.069
44 259987_at AT1G75030 ATLP-3, thaumatin-like protein 3, TLP-3, thaumatin-like protein 3 0.338 -0.288
45 260399_at AT1G72520 ATLOX4, Arabidopsis thaliana lipoxygenase 4, LOX4, lipoxygenase 4 0.331 0.190
46 267065_at AT2G41080 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.313 -0.052
47 265668_at AT2G32020 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] 0.312 0.962
48 261713_at AT1G32640 ATMYC2, JAI1, JASMONATE INSENSITIVE 1, JIN1, JASMONATE INSENSITIVE 1, MYC2, RD22BP1, ZBF1 0.310 -0.076
49 252004_at AT3G52780 ATPAP20, PAP20 -0.458 0.047
50 250200_at AT5G14130 [Peroxidase superfamily protein] -0.412 -0.031
51 252078_at AT3G51740 IMK2, inflorescence meristem receptor-like kinase 2 -0.402 -0.077
52 264960_at AT1G76930 ATEXT1, EXTENSIN 1, ATEXT4, extensin 4, EXT1, extensin 1, EXT4, extensin 4, ORG5, OBP3-RESPONSIVE GENE 5 -0.370 -0.199
53 246567_at AT5G14950 ATGMII, GMII, golgi alpha-mannosidase II -0.349 0.062
54 249626_at AT5G37540 [Eukaryotic aspartyl protease family protein] -0.343 0.012
55 266601_at AT2G46060 [transmembrane protein-related] -0.332 -0.030
56 252439_at AT3G47400 [Plant invertase/pectin methylesterase inhibitor superfamily] -0.325 -0.115
57 253925_at AT4G26690 GDPDL3, Glycerophosphodiester phosphodiesterase (GDPD) like 3, GPDL2, GLYCEROPHOSPHODIESTERASE-LIKE 2, MRH5, MUTANT ROOT HAIR 5, SHV3, SHAVEN 3 -0.314 -0.139
58 252128_at AT3G50870 GATA18, GATA TRANSCRIPTION FACTOR 18, HAN, HANABA TANARU, MNP, MONOPOLE -0.311 -0.057
59 261675_at AT1G18290 unknown -0.310 -0.124
60 256737_at AT3G29420 [geranylgeranyl pyrophosphate synthase-related / GGPP synthetase-related / farnesyltranstransferase-related] -0.308 0.028
61 265846_at AT2G35770 scpl28, serine carboxypeptidase-like 28 -0.303 -0.015
62 254326_at AT4G22610 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.299 -0.094
63 267260_at AT2G23130 AGP17, arabinogalactan protein 17, ATAGP17 -0.299 -0.269
64 251899_at AT3G54400 [Eukaryotic aspartyl protease family protein] -0.298 -0.118
65 258722_at AT3G09590 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.297 0.012
66 263688_at AT1G26920 unknown -0.295 -0.055
67 264389_at AT1G11960 [ERD (early-responsive to dehydration stress) family protein] -0.293 -0.061
68 249794_at AT5G23530 AtCXE18, carboxyesterase 18, CXE18, carboxyesterase 18 -0.293 -0.066
69 266022_at AT2G05920 [Subtilase family protein] -0.291 -0.054
70 253875_at AT4G27520 AtENODL2, ENODL2, early nodulin-like protein 2 -0.290 -0.032
71 259328_at AT3G16440 ATMLP-300B, myrosinase-binding protein-like protein-300B, MEE36, maternal effect embryo arrest 36, MLP-300B, myrosinase-binding protein-like protein-300B -0.289 -0.108
72 264318_at AT1G04220 KCS2, 3-ketoacyl-CoA synthase 2 -0.287 -0.100
73 245436_at AT4G16620 UMAMIT8, Usually multiple acids move in and out Transporters 8 -0.281 -0.047
74 250059_at AT5G17820 [Peroxidase superfamily protein] -0.276 -0.116
75 256908_at AT3G24040 [Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein] -0.272 -0.092
76 262846_at AT1G14670 [Endomembrane protein 70 protein family] -0.270 -0.099
77 265994_at AT2G24170 [Endomembrane protein 70 protein family] -0.270 -0.192
78 263293_x_at AT2G10880 [hypothetical protein, similar to hypothetical protein GB:AAC26673] -0.269 -0.082
79 264136_at AT1G78980 SRF5, STRUBBELIG-receptor family 5 -0.267 -0.009
80 254340_at AT4G22120 [ERD (early-responsive to dehydration stress) family protein] -0.265 -0.054
81 248572_at AT5G49800 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.262 -0.036
82 259014_at AT3G07320 [O-Glycosyl hydrolases family 17 protein] -0.261 -0.105
83 254761_at AT4G13195 CLE44, CLAVATA3/ESR-RELATED 44 -0.260 -0.167
84 255189_at AT4G07350 unknown -0.257 -0.023
85 252989_at AT4G38420 sks9, SKU5 similar 9 -0.253 -0.042
86 262768_at AT1G12990 [beta-1,4-N-acetylglucosaminyltransferase family protein] -0.252 -0.076
87 250143_at AT5G14670 ARFA1B, ADP-ribosylation factor A1B, ATARFA1B, ADP-ribosylation factor A1B -0.250 0.000
88 264001_at AT2G22420 [Peroxidase superfamily protein] -0.244 -0.119
89 245982_at AT5G13170 AtSWEET15, SAG29, senescence-associated gene 29, SWEET15 -0.241 -0.074
90 262504_at AT1G21750 ATPDI5, ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 5, ATPDIL1-1, PDI-like 1-1, PDI5, PROTEIN DISULFIDE ISOMERASE 5, PDIL1-1, PDI-like 1-1 -0.240 -0.089
91 247097_at AT5G66460 AtMAN7, MAN7, endo-beta-mannase 7 -0.235 -0.077
92 255332_at AT4G04340 [ERD (early-responsive to dehydration stress) family protein] -0.234 -0.013
93 266464_at AT2G47800 ABCC4, ATP-binding cassette C4, ATMRP4, multidrug resistance-associated protein 4, EST3, MRP4, multidrug resistance-associated protein 4 -0.234 0.175
94 254109_at AT4G25240 SKS1, SKU5 similar 1 -0.231 -0.066
95 267592_at AT2G39710 [Eukaryotic aspartyl protease family protein] -0.227 0.014