4.0:Information of module
epiF3
In comparison with bri1-116 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009611 response to wounding BP 5.047e-09
GO:0071705 nitrogen compound transport BP 1.377e-07
GO:0009694 jasmonic acid metabolic process BP 7.150e-07
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006952 defense response BP 3.238e-06
GO:0098542 defense response to other organism BP 3.689e-06
GO:0009617 response to bacterium BP 4.603e-06
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
epiF3		 Log2 signal ratio
bri1-116
1 264415_at AT1G43160 RAP2.6, related to AP2 6 1.180 0.030
2 266743_at AT2G02990 ATRNS1, RIBONUCLEASE 1, RNS1, ribonuclease 1 0.909 -0.071
3 263210_at AT1G10585 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.856 0.067
4 250476_at AT5G10140 AGL25, AGAMOUS-like 25, FLC, FLOWERING LOCUS C, FLF, FLOWERING LOCUS F, RSB6, REDUCED STEM BRANCHING 6 0.724 -0.183
5 247360_at AT5G63450 CYP94B1, cytochrome P450, family 94, subfamily B, polypeptide 1 0.680 -0.537
6 262756_at AT1G16370 ATOCT6, ARABIDOPSIS THALIANA ORGANIC CATION/CARNITINE TRANSPORTER 6, OCT6, organic cation/carnitine transporter 6 0.640 -0.317
7 263918_at AT2G36590 ATPROT3, PROLINE TRANSPORTER 3, ProT3, proline transporter 3 0.562 0.083
8 250287_at AT5G13330 Rap2.6L, related to AP2 6l 0.545 0.097
9 259568_at AT1G20490 [AMP-dependent synthetase and ligase family protein] 0.504 0.052
10 255527_at AT4G02360 unknown 0.495 -0.151
11 250455_at AT5G09980 PROPEP4, elicitor peptide 4 precursor 0.477 -0.141
12 250680_at AT5G06570 [alpha/beta-Hydrolases superfamily protein] 0.463 -0.314
13 252746_at AT3G43190 ATSUS4, ARABIDOPSIS THALIANA SUCROSE SYNTHASE 4, SUS4, sucrose synthase 4 0.445 0.060
14 264342_at AT1G12080 [Vacuolar calcium-binding protein-related] 0.405 -0.264
15 264887_at AT1G23120 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] 0.403 -0.032
16 248916_at AT5G45840 [Leucine-rich repeat protein kinase family protein] 0.398 0.063
17 266271_at AT2G29440 ATGSTU6, glutathione S-transferase tau 6, GST24, GLUTATHIONE S-TRANSFERASE 24, GSTU6, glutathione S-transferase tau 6 0.398 -0.339
18 261924_at AT1G22550 [Major facilitator superfamily protein] 0.389 -0.295
19 257517_at AT3G16330 unknown 0.381 -0.067
20 249540_at AT5G38120 4CL8 0.374 0.096
21 263032_at AT1G23850 unknown 0.359 0.065
22 252529_at AT3G46490 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.352 0.166
23 261930_at AT1G22440 [Zinc-binding alcohol dehydrogenase family protein] 0.350 -0.425
24 261001_at AT1G26530 [PIN domain-like family protein] 0.346 0.096
25 249771_at AT5G24080 [Protein kinase superfamily protein] 0.344 0.114
26 266883_at AT2G44810 DAD1, DEFECTIVE ANTHER DEHISCENCE 1 0.335 -0.028
27 262133_at AT1G78000 SEL1, SELENATE RESISTANT 1, SULTR1;2, sulfate transporter 1;2 0.323 0.021
28 266108_at AT2G37900 [Major facilitator superfamily protein] 0.314 -0.014
29 264436_at AT1G10370 ATGSTU17, GLUTATHIONE S-TRANSFERASE TAU 17, ERD9, EARLY-RESPONSIVE TO DEHYDRATION 9, GST30, GLUTATHIONE S-TRANSFERASE 30, GST30B, GLUTATHIONE S-TRANSFERASE 30B, GSTU17, GLUTATHIONE S-TRANSFERASE U17 0.311 -0.176
30 256781_at AT3G13650 [Disease resistance-responsive (dirigent-like protein) family protein] 0.305 -0.229
31 265588_at AT2G19970 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.304 -0.023
32 251346_at AT3G60980 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.303 0.138
33 247030_at AT5G67210 IRX15-L, IRX15-LIKE 0.303 -0.189
34 250413_at AT5G11160 APT5, adenine phosphoribosyltransferase 5 0.301 0.182
35 252882_at AT4G39675 unknown 0.298 -0.055
36 245306_at AT4G14690 ELIP2, EARLY LIGHT-INDUCIBLE PROTEIN 2 0.298 0.221
37 259705_at AT1G77450 anac032, NAC domain containing protein 32, NAC032, NAC domain containing protein 32 0.296 0.020
38 250292_at AT5G13220 JAS1, JASMONATE-ASSOCIATED 1, JAZ10, jasmonate-zim-domain protein 10, TIFY9, TIFY DOMAIN PROTEIN 9 0.296 0.220
39 252594_at AT3G45680 [Major facilitator superfamily protein] 0.292 -0.200
40 247833_at AT5G58575 unknown 0.290 0.094
41 254323_at AT4G22620 SAUR34, SMALL AUXIN UPREGULATED RNA 34 0.288 0.005
42 253660_at AT4G30140 CDEF1, CUTICLE DESTRUCTING FACTOR 1 0.285 0.014
43 262446_at AT1G49310 unknown 0.282 0.048
44 260023_at AT1G30040 ATGA2OX2, gibberellin 2-oxidase, GA2OX2, gibberellin 2-oxidase, GA2OX2, GIBBERELLIN 2-OXIDASE 2 0.275 -0.116
45 264853_at AT2G17260 ATGLR2, ATGLR3.1, GLR2, glutamate receptor 2, GLR3.1 0.272 0.035
46 259881_at AT1G76820 [eukaryotic translation initiation factor 2 (eIF-2) family protein] 0.266 0.021
47 258321_at AT3G22840 ELIP, ELIP1, EARLY LIGHT-INDUCABLE PROTEIN 0.265 -0.150
48 253629_at AT4G30450 [glycine-rich protein] 0.257 -0.011
49 258338_at AT3G16150 ASPGB1, asparaginase B1 0.256 -0.243
50 259445_at AT1G02400 ATGA2OX4, Arabidopsis thaliana gibberellin 2-oxidase 4, ATGA2OX6, ARABIDOPSIS THALIANA GIBBERELLIN 2-OXIDASE 6, DTA1, DOWNSTREAM TARGET OF AGL15 1, GA2OX6, gibberellin 2-oxidase 6 0.253 -0.023
51 252495_at AT3G46770 [AP2/B3-like transcriptional factor family protein] 0.251 0.089
52 260039_at AT1G68795 CLE12, CLAVATA3/ESR-RELATED 12 0.249 0.038
53 252462_at AT3G47250 unknown -1.433 0.351
54 264958_at AT1G76960 unknown -1.250 -0.215
55 252703_at AT3G43740 [Leucine-rich repeat (LRR) family protein] -1.058 0.025
56 252648_at AT3G44630 [Disease resistance protein (TIR-NBS-LRR class) family] -1.020 0.005
57 245729_at AT1G73490 [RNA-binding (RRM/RBD/RNP motifs) family protein] -1.006 0.078
58 256940_at AT3G30720 QQS, QUA-QUINE STARCH -0.899 0.007
59 263023_at AT1G23960 unknown -0.863 0.053
60 257714_at AT3G27360 H3.1, histone 3.1 -0.672 -0.041
61 264774_at AT1G22890 unknown -0.666 0.187
62 259529_at AT1G12400 [Nucleotide excision repair, TFIIH, subunit TTDA] -0.629 0.003
63 252485_at AT3G46530 RPP13, RECOGNITION OF PERONOSPORA PARASITICA 13 -0.619 0.213
64 247742_at AT5G58980 [Neutral/alkaline non-lysosomal ceramidase] -0.554 0.137
65 257272_at AT3G28130 UMAMIT44, Usually multiple acids move in and out Transporters 44 -0.531 0.081
66 252446_at AT3G47010 [Glycosyl hydrolase family protein] -0.525 0.200
67 264893_at AT1G23140 [Calcium-dependent lipid-binding (CaLB domain) family protein] -0.517 -0.113
68 252549_at AT3G45860 CRK4, cysteine-rich RLK (RECEPTOR-like protein kinase) 4 -0.512 0.080
69 249174_at AT5G42900 COR27, cold regulated gene 27 -0.506 0.008
70 256100_at AT1G13750 [Purple acid phosphatases superfamily protein] -0.487 -0.038
71 252444_at AT3G46980 PHT4;3, phosphate transporter 4;3 -0.483 0.025
72 249242_at AT5G42250 [Zinc-binding alcohol dehydrogenase family protein] -0.469 -0.372
73 254255_at AT4G23220 CRK14, cysteine-rich RLK (RECEPTOR-like protein kinase) 14 -0.468 0.031
74 247189_at AT5G65390 AGP7, arabinogalactan protein 7 -0.452 -0.103
75 249128_at AT5G43440 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.445 0.193
76 259489_at AT1G15790 unknown -0.435 -0.076
77 261453_at AT1G21130 IGMT4, indole glucosinolate O-methyltransferase 4 -0.425 -0.105
78 246932_at AT5G25190 ESE3, ethylene and salt inducible 3 -0.409 0.295
79 253322_at AT4G33980 unknown -0.398 -0.046
80 252646_at AT3G44610 [Protein kinase superfamily protein] -0.387 0.034
81 254066_at AT4G25480 ATCBF3, CBF3, C-REPEAT BINDING FACTOR 3, DREB1A, dehydration response element B1A -0.375 -0.054
82 249265_at AT5G41700 ATUBC8, ARABIDOPSIS THALIANA UBIQUITIN CONJUGATING ENZYME 8, UBC8, ubiquitin conjugating enzyme 8 -0.374 -0.008
83 256596_at AT3G28540 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.363 0.015
84 264346_at AT1G12010 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.363 0.151
85 247358_at AT5G63580 ATFLS2, FLS2, flavonol synthase 2 -0.362 -0.034
86 252300_at AT3G49160 [pyruvate kinase family protein] -0.355 -0.178
87 264751_at AT1G23020 ATFRO3, FERRIC REDUCTION OXIDASE 3, FRO3, ferric reduction oxidase 3 -0.339 0.141
88 265132_at AT1G23830 unknown -0.334 -0.095
89 254266_at AT4G23130 CRK5, cysteine-rich RLK (RECEPTOR-like protein kinase) 5, RLK6, RECEPTOR-LIKE PROTEIN KINASE 6 -0.333 0.093
90 250277_at AT5G12940 [Leucine-rich repeat (LRR) family protein] -0.330 -0.401
91 257285_at AT3G29760 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] -0.325 -0.116
92 248977_at AT5G45020 [Glutathione S-transferase family protein] -0.323 0.056
93 251684_at AT3G56410 unknown -0.321 -0.004
94 253679_at AT4G29610 [Cytidine/deoxycytidylate deaminase family protein] -0.316 0.046
95 248301_at AT5G53150 [DNAJ heat shock N-terminal domain-containing protein] -0.315 -0.023
96 256582_at AT3G28840 unknown -0.313 0.049
97 249741_at AT5G24470 APRR5, pseudo-response regulator 5, PRR5, pseudo-response regulator 5 -0.302 0.089
98 252976_s_at AT4G38550 [Arabidopsis phospholipase-like protein (PEARLI 4) family] -0.297 -0.210
99 249727_at AT5G35490 ATMRU1, ARABIDOPSIS MTO 1 RESPONDING UP 1, MRU1, MTO 1 RESPONDING UP 1 -0.289 0.082
100 247345_at AT5G63760 ARI15, ARIADNE 15, ATARI15, ARABIDOPSIS ARIADNE 15 -0.285 -0.038
101 248847_at AT5G46510 VICTL, VARIATION IN COMPOUND TRIGGERED ROOT growth response-like -0.284 0.082
102 245765_at AT1G33600 [Leucine-rich repeat (LRR) family protein] -0.265 0.029
103 259743_at AT1G71140 [MATE efflux family protein] -0.263 -0.101