4.0:Information of module
35S:CDO1 normoxia
In comparison with Col BTH help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0015979 photosynthesis BP 7.993e-18
GO:0019684 photosynthesis, light reaction BP 2.916e-17
GO:0010207 photosystem II assembly BP 5.749e-15
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0016144 S-glycoside biosynthetic process BP 1.735e-16
GO:0019758 glycosinolate biosynthetic process BP 1.735e-16
GO:0019761 glucosinolate biosynthetic process BP 1.735e-16
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
35S:CDO1 normoxia		 Log2 signal ratio
Col BTH
1 250152_at AT5G15120 unknown 0.998 0.210
2 262719_at AT1G43590 unknown 0.592 -0.032
3 267089_at AT2G38300 [myb-like HTH transcriptional regulator family protein] 0.175 -0.120
4 261350_at AT1G79770 unknown 0.172 -0.170
5 249408_at AT5G40330 ATMYB23, MYB DOMAIN PROTEIN 23, ATMYBRTF, MYB23, myb domain protein 23 0.157 -0.030
6 262480_at AT1G11340 [S-locus lectin protein kinase family protein] 0.141 -0.019
7 267473_at AT2G02750 [Pentatricopeptide repeat (PPR) superfamily protein] 0.136 -0.027
8 258617_at AT3G03000 [EF hand calcium-binding protein family] 0.130 0.041
9 247925_at AT5G57560 TCH4, Touch 4, XTH22, xyloglucan endotransglucosylase/hydrolase 22 0.127 0.097
10 257110_x_at AT3G30440 [similar to Ulp1 protease family protein [Arabidopsis thaliana] (TAIR:AT2G14130.1)] 0.127 0.011
11 251284_at AT3G61840 unknown 0.120 0.042
12 263775_at AT2G46410 CPC, CAPRICE 0.120 -0.002
13 245501_at AT4G15620 [Uncharacterised protein family (UPF0497)] 0.118 -0.165
14 251509_at AT3G59010 PME35, pectin methylesterase 35, PME61, pectin methylesterase 61 0.116 -0.021
15 261819_at AT1G11410 [S-locus lectin protein kinase family protein] 0.114 -0.129
16 258423_at AT3G16730 HEB2, hypersensitive to excess boron 2 0.111 0.083
17 260166_at AT1G79840 GL2, GLABRA 2 0.110 -0.078
18 261459_at AT1G21100 IGMT1, indole glucosinolate O-methyltransferase 1 0.107 -0.001
19 263443_at AT2G28630 KCS12, 3-ketoacyl-CoA synthase 12 0.105 0.082
20 248239_at AT5G53920 [ribosomal protein L11 methyltransferase-related] 0.104 -0.043
21 247604_at AT5G60950 COBL5, COBRA-like protein 5 precursor 0.103 0.227
22 266016_at AT2G18670 [RING/U-box superfamily protein] 0.103 0.072
23 263558_at AT2G16380 [Sec14p-like phosphatidylinositol transfer family protein] 0.103 -0.036
24 264007_at AT2G21140 ATPRP2, proline-rich protein 2, PRP2, proline-rich protein 2 0.100 -0.062
25 251658_at AT3G57020 [Calcium-dependent phosphotriesterase superfamily protein] 0.099 -0.079
26 267144_at AT2G38110 ATGPAT6, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 6, GPAT6, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 6 0.098 -0.061
27 246894_at AT5G25530 [DNAJ heat shock family protein] 0.098 0.018
28 265536_at AT2G15880 [Leucine-rich repeat (LRR) family protein] 0.097 0.020
29 248257_at AT5G53410 unknown 0.097 0.016
30 262870_at AT1G64710 [GroES-like zinc-binding dehydrogenase family protein] 0.097 0.027
31 252118_at AT3G51400 unknown 0.097 0.069
32 259418_at AT1G02390 ATGPAT2, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 2, GPAT2, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 2 0.097 -0.091
33 248759_at AT5G47610 [RING/U-box superfamily protein] 0.096 -0.173
34 249284_at AT5G41810 unknown 0.096 -0.093
35 266485_at AT2G47630 [alpha/beta-Hydrolases superfamily protein] 0.096 -0.069
36 267289_at AT2G23770 LYK4, LysM-containing receptor-like kinase 4 0.096 -0.056
37 263412_at AT2G28720 [Histone superfamily protein] 0.095 -0.065
38 251181_at AT3G62820 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.094 -0.224
39 259514_at AT1G12480 CDI3, CARBON DIOXIDE INSENSITIVE 3, OZS1, OZONE-SENSITIVE 1, RCD3, RADICAL-INDUCED CELL DEATH 3, SLAC1, SLOW ANION CHANNEL-ASSOCIATED 1 0.094 -0.113
40 254241_at AT4G23190 AT-RLK3, RECEPTOR LIKE PROTEIN KINASE 3, CRK11, cysteine-rich RLK (RECEPTOR-like protein kinase) 11 0.092 0.055
41 256985_at AT3G13540 ATMYB5, myb domain protein 5, MYB5, myb domain protein 5 0.092 -0.060
42 261420_at AT1G07720 KCS3, 3-ketoacyl-CoA synthase 3 0.091 -0.057
43 266983_at AT2G39400 [alpha/beta-Hydrolases superfamily protein] 0.089 0.076
44 261453_at AT1G21130 IGMT4, indole glucosinolate O-methyltransferase 4 0.088 -0.001
45 250189_at AT5G14410 unknown 0.087 -0.138
46 247255_at AT5G64780 [Uncharacterised conserved protein UCP009193] 0.087 0.046
47 251987_at AT3G53280 CYP71B5, cytochrome p450 71b5 0.086 -0.030
48 261277_at AT1G20230 [Pentatricopeptide repeat (PPR) superfamily protein] 0.086 -0.055
49 260624_at AT1G08100 ACH2, ATNRT2.2, NITRATE TRANSPORTER 2.2, NRT2.2, nitrate transporter 2.2, NRT2;2AT 0.086 -0.009
50 256647_at AT3G13610 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0.085 0.270
51 245029_at AT2G26580 YAB5, YABBY5 0.085 0.003
52 266600_at AT2G46070 ATMPK12, MAPK12, MPK12, mitogen-activated protein kinase 12 0.084 -0.087
53 261946_at AT1G64560 0.084 -0.044
54 264482_at AT1G77210 AtSTP14, sugar transport protein 14, STP14, sugar transport protein 14 0.084 0.098
55 246582_at AT1G31750 [proline-rich family protein] 0.084 0.022
56 253472_at AT4G32230 unknown 0.084 -0.029
57 252810_at AT3G42440 unknown 0.084 0.023
58 254986_at AT4G10640 IQD16, IQ-domain 16 0.079 0.024
59 252529_at AT3G46490 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.078 -0.285
60 253800_at AT4G28160 [hydroxyproline-rich glycoprotein family protein] 0.078 -0.068
61 259841_at AT1G52200 [PLAC8 family protein] 0.078 0.138
62 260966_at AT1G12220 RPS5, RESISTANT TO P. SYRINGAE 5 0.077 0.108
63 251746_at AT3G56060 [Glucose-methanol-choline (GMC) oxidoreductase family protein] 0.077 -0.127
64 255294_at AT4G04750 [Major facilitator superfamily protein] 0.077 -0.162
65 245799_at AT1G45616 AtRLP6, receptor like protein 6, RLP6, receptor like protein 6 0.077 -0.022
66 255732_at AT1G25450 CER60, ECERIFERUM 60, KCS5, 3-ketoacyl-CoA synthase 5 0.076 -0.052
67 248599_at AT5G49380 unknown 0.076 -0.061
68 264909_at AT2G17300 unknown 0.076 -0.135
69 256094_at AT1G20780 ATPUB44, ARABIDOPSIS THALIANA PLANT U-BOX 44, PUB44, PLANT U-BOX 44, SAUL1, senescence-associated E3 ubiquitin ligase 1 0.075 0.058
70 255741_at AT1G25410 ATIPT6, ARABIDOPSIS THALIANA ISOPENTENYLTRANSFERASE 6, IPT6, isopentenyltransferase 6 0.075 0.077
71 267278_at AT2G19350 unknown 0.074 -0.004
72 265117_at AT1G62500 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.627 0.061
73 265588_at AT2G19970 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.503 -0.028
74 258487_at AT3G02550 LBD41, LOB domain-containing protein 41 -0.492 0.211
75 257952_at AT3G21770 [Peroxidase superfamily protein] -0.422 0.073
76 251886_at AT3G54260 TBL36, TRICHOME BIREFRINGENCE-LIKE 36 -0.328 -0.043
77 255517_at AT4G02290 AtGH9B13, glycosyl hydrolase 9B13, GH9B13, glycosyl hydrolase 9B13 -0.326 -0.007
78 261826_at AT1G11580 ATPMEPCRA, PMEPCRA, methylesterase PCR A -0.310 -0.079
79 263179_at AT1G05710 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.291 0.100
80 245688_at AT1G28290 AGP31, arabinogalactan protein 31 -0.263 0.046
81 264953_at AT1G77120 ADH, ALCOHOL DEHYDROGENASE, ADH1, alcohol dehydrogenase 1, ATADH, ARABIDOPSIS THALIANA ALCOHOL DEHYDROGENASE, ATADH1 -0.256 0.107
82 247151_at AT5G65640 bHLH093, beta HLH protein 93 -0.253 -0.101
83 265656_at AT2G13820 AtXYP2, XYP2, xylogen protein 2 -0.249 -0.074
84 249867_at AT5G23020 IMS2, 2-isopropylmalate synthase 2, MAM-L, METHYLTHIOALKYMALATE SYNTHASE-LIKE, MAM3 -0.243 0.054
85 260181_at AT1G70710 ATGH9B1, glycosyl hydrolase 9B1, CEL1, CELLULASE 1, GH9B1, glycosyl hydrolase 9B1 -0.234 -0.012
86 250344_at AT5G11930 [Thioredoxin superfamily protein] -0.231 0.415
87 253010_at AT4G37750 ANT, AINTEGUMENTA, CKC, CKC1, COMPLEMENTING A PROTEIN KINASE C MUTANT 1, DRG, DRAGON -0.223 -0.030
88 264280_at AT1G61820 BGLU46, beta glucosidase 46 -0.222 0.011
89 261834_at AT1G10640 [Pectin lyase-like superfamily protein] -0.209 -0.126
90 260074_at AT1G73640 AtRABA6a, RAB GTPase homolog A6A, RABA6a, RAB GTPase homolog A6A -0.208 -0.066
91 257066_at AT3G18280 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.204 -0.054
92 248539_at AT5G50130 [NAD(P)-binding Rossmann-fold superfamily protein] -0.202 0.098
93 252077_at AT3G51720 unknown -0.196 -0.018
94 266223_at AT2G28790 [Pathogenesis-related thaumatin superfamily protein] -0.189 0.010
95 256899_at AT3G24660 TMKL1, transmembrane kinase-like 1 -0.185 -0.002
96 247948_at AT5G57130 SMXL5, SMAX1-like 5 -0.184 -0.056
97 260565_at AT2G43800 [Actin-binding FH2 (formin homology 2) family protein] -0.184 -0.063
98 267357_at AT2G40000 ATHSPRO2, ARABIDOPSIS ORTHOLOG OF SUGAR BEET HS1 PRO-1 2, HSPRO2, ortholog of sugar beet HS1 PRO-1 2 -0.181 -0.004
99 263250_at AT2G31390 [pfkB-like carbohydrate kinase family protein] -0.180 0.096
100 255782_at AT1G19850 ARF5, AUXIN RESPONSE FACTOR 5, IAA24, indole-3-acetic acid inducible 24, MP, MONOPTEROS -0.179 -0.048
101 267590_at AT2G39700 ATEXP4, ATEXPA4, expansin A4, ATHEXP ALPHA 1.6, EXPA4, expansin A4 -0.176 -0.092
102 253270_at AT4G34160 CYCD3, CYCD3;1, CYCLIN D3;1 -0.174 -0.035
103 261033_at AT1G17380 JAZ5, jasmonate-zim-domain protein 5, TIFY11A -0.171 -0.134
104 249046_at AT5G44400 [FAD-binding Berberine family protein] -0.167 0.025
105 246310_at AT3G51895 AST12, SULTR3;1, sulfate transporter 3;1 -0.165 -0.051
106 259845_at AT1G73590 ATPIN1, ARABIDOPSIS THALIANA PIN-FORMED 1, PIN1, PIN-FORMED 1 -0.164 -0.016
107 250661_at AT5G07030 [Eukaryotic aspartyl protease family protein] -0.161 -0.027
108 247527_at AT5G61480 PXY, PHLOEM INTERCALATED WITH XYLEM, TDR, TDIF receptor -0.161 -0.055
109 245947_at AT5G19530 ACL5, ACAULIS 5 -0.161 -0.021
110 251317_at AT3G61490 [Pectin lyase-like superfamily protein] -0.160 -0.030
111 255876_at AT2G40480 unknown -0.157 -0.069
112 253815_at AT4G28250 ATEXPB3, expansin B3, ATHEXP BETA 1.6, EXPB3, expansin B3 -0.155 -0.126
113 257191_at AT3G13175 unknown -0.155 0.105
114 248150_at AT5G54670 ATK3, kinesin 3, KATC, KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA C -0.154 -0.047
115 247175_at AT5G65280 GCL1, GCR2-like 1 -0.152 -0.111
116 258851_at AT3G03190 ATGSTF11, glutathione S-transferase F11, ATGSTF6, ARABIDOPSIS GLUTATHIONE-S-TRANSFERASE 6, GSTF11, glutathione S-transferase F11 -0.152 -0.171
117 265188_at AT1G23800 ALDH2B, aldehyde dehydrogenase 2B, ALDH2B7, aldehyde dehydrogenase 2B7 -0.150 -0.053
118 260332_at AT1G70470 unknown -0.149 -0.037
119 264025_at AT2G21050 LAX2, like AUXIN RESISTANT 2 -0.148 -0.091
120 265448_at AT2G46590 Dof-type zinc finger DNA-binding family protein -0.146 0.058
121 260034_at AT1G68810 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.144 -0.055
122 259166_at AT3G01670 AtSEOR2, Arabidopsis thaliana sieve element occlusion-related 2, SEOa, sieve element occlusion a, SEOR2, sieve element occlusion-related 2 -0.144 -0.144
123 267388_at AT2G44450 BGLU15, beta glucosidase 15 -0.143 0.080
124 253749_at AT4G29080 IAA27, indole-3-acetic acid inducible 27, PAP2, phytochrome-associated protein 2 -0.139 -0.058
125 251113_at AT5G01370 ACI1, ALC-interacting protein 1, TRM29, TON1 Recruiting Motif 29 -0.136 -0.045
126 263485_at AT2G29890 ATVLN1, VLN1, villin 1 -0.134 -0.046
127 259832_at AT1G69580 [Homeodomain-like superfamily protein] -0.127 -0.066
128 254633_at AT4G18640 MRH1, morphogenesis of root hair 1 -0.127 -0.178
129 258938_at AT3G10080 [RmlC-like cupins superfamily protein] -0.126 -0.134
130 257761_at AT3G23090 WDL3 -0.124 -0.016
131 262922_at AT1G79420 unknown -0.123 0.017
132 261399_at AT1G79620 [Leucine-rich repeat protein kinase family protein] -0.122 -0.141
133 260887_at AT1G29160 [Dof-type zinc finger DNA-binding family protein] -0.119 0.004
134 266322_at AT2G46690 SAUR32, SMALL AUXIN UPREGULATED RNA 32 -0.118 -0.089
135 260144_at AT1G71960 ABCG25, ATP-binding casette G25, ATABCG25, Arabidopsis thaliana ATP-binding cassette G25 -0.118 0.088
136 266325_at AT2G46630 unknown -0.118 -0.053
137 262831_at AT1G14730 [Cytochrome b561/ferric reductase transmembrane protein family] -0.116 -0.184
138 254515_at AT4G20270 BAM3, BARELY ANY MERISTEM 3 -0.115 -0.098
139 261521_at AT1G71830 ATSERK1, SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1, SERK1, somatic embryogenesis receptor-like kinase 1 -0.115 -0.009
140 249916_at AT5G22880 H2B, HISTONE H2B, HTB2, histone B2 -0.114 0.009
141 264271_at AT1G60270 BGLU6, beta glucosidase 6 -0.114 -0.032