4.0:Information of module
INA
In comparison with bri1-116 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009814 defense response, incompatible interacti... BP 5.742e-59
GO:0009627 systemic acquired resistance BP 3.665e-58
GO:0045087 innate immune response BP 6.802e-51
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0042440 pigment metabolic process BP 5.082e-08
GO:0044699 single-organism process BP 1.675e-07
GO:0044711 single-organism biosynthetic process BP 3.798e-06
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
INA		 Log2 signal ratio
bri1-116
1 256766_at AT3G22231 PCC1, PATHOGEN AND CIRCADIAN CONTROLLED 1 1.355 -0.136
2 265837_at AT2G14560 LURP1, LATE UPREGULATED IN RESPONSE TO HYALOPERONOSPORA PARASITICA 1.058 0.205
3 259561_at AT1G21250 AtWAK1, PRO25, WAK1, cell wall-associated kinase 1 1.026 -0.015
4 251705_at AT3G56400 ATWRKY70, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 70, WRKY70, WRKY DNA-binding protein 70 1.024 -0.059
5 250445_at AT5G10760 [Eukaryotic aspartyl protease family protein] 1.019 0.084
6 245265_at AT4G14400 ACD6, ACCELERATED CELL DEATH 6 1.001 0.082
7 257382_at AT2G40750 ATWRKY54, WRKY DNA-BINDING PROTEIN 54, WRKY54, WRKY DNA-binding protein 54 0.949 0.079
8 248169_at AT5G54610 ANK, ankyrin, BDA1, bian da 2 (becoming big in Chinese) 0.932 0.090
9 246293_at AT3G56710 SIB1, sigma factor binding protein 1 0.897 0.035
10 252549_at AT3G45860 CRK4, cysteine-rich RLK (RECEPTOR-like protein kinase) 4 0.850 0.080
11 250942_at AT5G03350 [Legume lectin family protein] 0.826 0.148
12 265698_at AT2G32160 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.823 -0.115
13 245038_at AT2G26560 PLA IIA, PHOSPHOLIPASE A 2A, PLA2A, phospholipase A 2A, PLAII alpha, PLP2, PATATIN-LIKE PROTEIN 2, PLP2, PHOSPHOLIPASE A 2A 0.816 -0.268
14 258537_at AT3G04210 [Disease resistance protein (TIR-NBS class)] 0.668 0.109
15 261339_at AT1G35710 [Protein kinase family protein with leucine-rich repeat domain] 0.632 0.079
16 251625_at AT3G57260 AtBG2, AtPR2, BG2, BETA-1,3-GLUCANASE 2, BGL2, beta-1,3-glucanase 2, PR-2, PATHOGENESIS-RELATED PROTEIN 2, PR2, PATHOGENESIS-RELATED PROTEIN 2 0.602 0.066
17 248062_at AT5G55450 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.599 0.098
18 267076_at AT2G41090 [Calcium-binding EF-hand family protein] 0.538 -0.025
19 260211_at AT1G74440 unknown 0.532 0.051
20 254416_at AT4G21380 ARK3, receptor kinase 3, RK3, receptor kinase 3 0.520 -0.057
21 247602_at AT5G60900 RLK1, receptor-like protein kinase 1 0.502 -0.006
22 261221_at AT1G19960 unknown 0.483 0.014
23 254255_at AT4G23220 CRK14, cysteine-rich RLK (RECEPTOR-like protein kinase) 14 0.474 0.031
24 263584_at AT2G17040 anac036, NAC domain containing protein 36, NAC036, NAC domain containing protein 36 0.459 0.075
25 249754_at AT5G24530 DMR6, DOWNY MILDEW RESISTANT 6 0.420 -0.188
26 259560_at AT1G21270 WAK2, wall-associated kinase 2 0.418 0.069
27 260396_at AT1G69720 HO3, heme oxygenase 3 0.414 0.144
28 253414_at AT4G33050 AtIQM1, EDA39, embryo sac development arrest 39, IQM1, IQ-motif protein 1 0.410 0.021
29 245052_at AT2G26440 PME12, pectin methylesterase 12 0.409 -0.045
30 245329_at AT4G14365 XBAT34, XB3 ortholog 4 in Arabidopsis thaliana 0.402 -0.203
31 265611_at AT2G25510 unknown 0.402 0.067
32 253997_at AT4G26090 RPS2, RESISTANT TO P. SYRINGAE 2 0.399 -0.026
33 260904_at AT1G02450 NIMIN-1, NIMIN1, NIM1-interacting 1 0.393 0.108
34 249485_at AT5G39020 [Malectin/receptor-like protein kinase family protein] 0.390 -0.039
35 251673_at AT3G57240 AtBG3, BG3, beta-1,3-glucanase 3 0.385 0.124
36 260419_at AT1G69730 [Wall-associated kinase family protein] 0.376 0.153
37 247684_at AT5G59670 [Leucine-rich repeat protein kinase family protein] 0.363 0.010
38 267546_at AT2G32680 AtRLP23, receptor like protein 23, RLP23, receptor like protein 23 0.363 0.022
39 259925_at AT1G75040 PR-5, PR5, pathogenesis-related gene 5 0.354 0.144
40 249777_at AT5G24210 [alpha/beta-Hydrolases superfamily protein] 0.350 -0.152
41 250435_at AT5G10380 ATRING1, RING1 0.348 0.186
42 248322_at AT5G52760 [Copper transport protein family] 0.343 -0.009
43 255148_at AT4G08470 MAPKKK10, MEKK3, MAPK/ERK kinase kinase 3 0.339 0.020
44 256100_at AT1G13750 [Purple acid phosphatases superfamily protein] 0.311 -0.038
45 264958_at AT1G76960 unknown 0.307 -0.215
46 249918_at AT5G19240 [Glycoprotein membrane precursor GPI-anchored] 0.307 -0.391
47 265917_at AT2G15080 AtRLP19, receptor like protein 19, RLP19, receptor like protein 19 0.305 0.009
48 256096_at AT1G13650 unknown -0.325 0.029
49 254828_at AT4G12550 AIR1, Auxin-Induced in Root cultures 1 -0.290 0.076
50 262838_at AT1G14960 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] -0.278 -0.138
51 265665_at AT2G27420 [Cysteine proteinases superfamily protein] -0.246 0.073
52 249215_at AT5G42800 DFR, dihydroflavonol 4-reductase, M318, TT3 -0.245 0.107
53 248728_at AT5G48000 CYP708 A2, CYTOCHROME P450, FAMILY 708, SUBFAMILY A, POLYPEPTIDE 2, CYP708A2, cytochrome P450, family 708, subfamily A, polypeptide 2, THAH, THALIANOL HYDROXYLASE, THAH1, THALIANOL HYDROXYLASE 1 -0.233 -0.539
54 252520_at AT3G46370 [Leucine-rich repeat protein kinase family protein] -0.210 -0.016
55 245628_at AT1G56650 ATMYB75, MYB DOMAIN PROTEIN 75, MYB75, MYELOBLASTOSIS PROTEIN 75, PAP1, production of anthocyanin pigment 1, SIAA1, SUC-INDUCED ANTHOCYANIN ACCUMULATION 1 -0.203 -0.174
56 258322_at AT3G22740 HMT3, homocysteine S-methyltransferase 3 -0.200 0.056
57 260727_at AT1G48100 [Pectin lyase-like superfamily protein] -0.200 0.119
58 256603_at AT3G28270 unknown -0.199 0.095
59 265122_at AT1G62540 FMO GS-OX2, flavin-monooxygenase glucosinolate S-oxygenase 2 -0.187 0.046
60 249071_at AT5G44050 [MATE efflux family protein] -0.184 0.065
61 248377_at AT5G51720 At-NEET, NEET, NEET group protein -0.183 0.119
62 248185_at AT5G54060 UF3GT, UDP-glucose:flavonoid 3-o-glucosyltransferase, UGT79B1, UDP-glucosyl transferase 79B1 -0.182 0.023
63 250541_at AT5G09520 PELPK2, Pro-Glu-Leu|Ile|Val-Pro-Lys 2 -0.179 0.101
64 248727_at AT5G47990 CYP705A5, cytochrome P450, family 705, subfamily A, polypeptide 5, THAD, THALIAN-DIOL DESATURASE, THAD1, THALIAN-DIOL DESATURASE -0.178 -0.531
65 263574_at AT2G16990 [Major facilitator superfamily protein] -0.159 -0.012
66 258252_at AT3G15720 [Pectin lyase-like superfamily protein] -0.158 -0.206
67 249774_at AT5G24150 SQE5, SQUALENE MONOOXYGENASE 5, SQP1 -0.152 -0.070
68 264931_at AT1G60590 [Pectin lyase-like superfamily protein] -0.147 0.015
69 250561_at AT5G08030 AtGDPD6, GDPD6, glycerophosphodiester phosphodiesterase 6 -0.145 0.001
70 263765_at AT2G21540 ATSFH3, SEC14-LIKE 3, SFH3, SEC14-like 3 -0.144 -0.244
71 261428_at AT1G18870 ATICS2, ARABIDOPSIS ISOCHORISMATE SYNTHASE 2, ICS2, isochorismate synthase 2 -0.141 -0.489
72 249732_at AT5G24420 PGL5, 6-phosphogluconolactonase 5 -0.136 0.137
73 254816_at AT4G12440 APT4, adenine phosphoribosyl transferase 4 -0.133 0.110
74 256020_at AT1G58290 AtHEMA1, Arabidopsis thaliana hemA 1, HEMA1 -0.132 0.441
75 252629_at AT3G44970 [Cytochrome P450 superfamily protein] -0.129 0.115
76 249934_at AT5G22410 RHS18, root hair specific 18 -0.127 0.028
77 265111_at AT1G62510 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.126 0.178
78 250099_at AT5G17300 RVE1, REVEILLE 1 -0.125 0.034
79 260234_at AT1G74460 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.124 -0.114
80 258901_at AT3G05640 [Protein phosphatase 2C family protein] -0.123 -0.034
81 257017_at AT3G19620 [Glycosyl hydrolase family protein] -0.123 0.111
82 249620_at AT5G37520 unknown -0.123 0.023
83 248467_at AT5G50800 AtSWEET13, SWEET13 -0.121 0.047
84 258409_at AT3G17640 [Leucine-rich repeat (LRR) family protein] -0.121 -0.191
85 264102_at AT1G79270 ECT8, evolutionarily conserved C-terminal region 8 -0.120 -0.355
86 247734_at AT5G59400 unknown -0.119 0.046
87 252300_at AT3G49160 [pyruvate kinase family protein] -0.117 -0.178
88 254174_at AT4G24120 ATYSL1, YELLOW STRIPE LIKE 1, YSL1, YELLOW STRIPE like 1 -0.117 0.127
89 257428_at AT1G78990 [HXXXD-type acyl-transferase family protein] -0.117 0.010
90 254305_at AT4G22200 AKT2, AKT2/3, potassium transport 2/3, AKT3, KT2/3, potassium transport 2/3 -0.115 0.058
91 264965_at AT1G60560 [SWIM zinc finger family protein] -0.113 -0.065
92 252238_at AT3G49960 [Peroxidase superfamily protein] -0.112 0.025
93 248352_at AT5G52300 LTI65, LOW-TEMPERATURE-INDUCED 65, RD29B, RESPONSIVE TO DESSICATION 29B -0.110 0.038