4.0:Information of module
Col-0 flu HL 0h
In comparison with CCA1-ox 6am non-polysomal help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0055072 iron ion homeostasis BP 4.703e-04
GO:0010092 specification of organ identity BP 6.144e-04
GO:0010093 specification of floral organ identity BP 6.144e-04
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006825 copper ion transport BP 1.195e-03
GO:0000165 MAPK cascade BP 1.688e-03
GO:0023014 signal transduction by phosphorylation BP 1.800e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Col-0 flu HL 0h		 Log2 signal ratio
CCA1-ox 6am non-polysomal
1 252036_at AT3G52070 unknown 0.898 -0.091
2 259372_at AT1G69120 AGL7, AGAMOUS-like 7, AP1, APETALA1, AtAP1 0.710 0.068
3 245422_at AT4G17470 [alpha/beta-Hydrolases superfamily protein] 0.489 -0.018
4 252300_at AT3G49160 [pyruvate kinase family protein] 0.342 0.034
5 245754_at AT1G35183 unknown 0.328 0.038
6 249617_at AT5G37450 [Leucine-rich repeat protein kinase family protein] 0.325 -0.143
7 254506_at AT4G20140 GSO1, GASSHO1 0.292 -0.104
8 248377_at AT5G51720 At-NEET, NEET, NEET group protein 0.285 0.016
9 264872_at AT1G24260 AGL9, AGAMOUS-like 9, SEP3, SEPALLATA3 0.263 -0.069
10 263988_at AT2G42830 AGL5, AGAMOUS-like 5, SHP2, SHATTERPROOF 2 0.253 -0.041
11 247553_at AT5G60910 AGL8, AGAMOUS-like 8, FUL, FRUITFULL 0.242 0.105
12 247666_at AT5G60140 [AP2/B3-like transcriptional factor family protein] 0.235 -0.065
13 260433_at AT1G68170 UMAMIT23, Usually multiple acids move in and out Transporters 23 0.216 0.068
14 266419_at AT2G38760 ANN3, ANNEXIN 3, ANNAT3, annexin 3, AtANN3 0.213 0.038
15 246531_at AT5G15800 AGL2, AGAMOUS-like 2, SEP1, SEPALLATA1 0.197 0.067
16 251564_at AT3G58160 ATMYOS3, ATXIJ, MYOSIN XI J, MYA3, MYOSIN A3, XI-16, MYOSIN XI-16, XIJ 0.182 -0.132
17 250360_at AT5G11360 [Interleukin-1 receptor-associated kinase 4 protein] 0.179 -0.078
18 265051_at AT1G52100 [Mannose-binding lectin superfamily protein] 0.167 -0.025
19 258377_at AT3G17690 ATCNGC19, CYCLIC NUCLEOTIDE-GATED CHANNEL 19, CNGC19, cyclic nucleotide gated channel 19 0.165 -0.147
20 260911_at AT1G02490 unknown 0.163 -0.055
21 248197_at AT5G54190 PORA, protochlorophyllide oxidoreductase A 0.158 0.009
22 265211_at AT2G36640 ATECP63, embryonic cell protein 63, ECP63, embryonic cell protein 63 0.155 -0.024
23 265600_at AT2G14230 [CACTA-like transposase family (Ptta/En/Spm), has a 2.0e-119 P-value blast match to At5g36655.1/81-333 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana)] -0.746 -0.006
24 251677_at AT3G56980 BHLH039, bHLH39, basic helix-loop-helix 39, ORG3, OBP3-RESPONSIVE GENE 3 -0.521 -0.104
25 245692_at AT5G04150 BHLH101 -0.488 -0.001
26 261814_at AT1G08310 [alpha/beta-Hydrolases superfamily protein] -0.451 0.149
27 258535_at AT3G06750 [hydroxyproline-rich glycoprotein family protein] -0.377 0.130
28 246001_at AT5G20790 unknown -0.352 0.035
29 261619_x_at AT1G33130 [CACTA-like transposase family (Ptta/En/Spm), has a 1.3e-125 P-value blast match to At5g36655.1/81-333 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana)] -0.352 0.059
30 259632_at AT1G56430 ATNAS4, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 4, NAS4, nicotianamine synthase 4 -0.337 -0.036
31 251197_at AT3G62960 [Thioredoxin superfamily protein] -0.336 0.073
32 256874_at AT3G26320 CYP71B36, cytochrome P450, family 71, subfamily B, polypeptide 36 -0.255 0.080
33 247718_at AT5G59310 LTP4, lipid transfer protein 4 -0.236 0.093
34 259346_at AT3G03910 glutamate dehydrogenase 3 -0.211 -0.100
35 245032_at AT2G26630 [transposase IS4 family protein, contains Pfam profile: PF01609 transposase DDE domain] -0.192 -0.023
36 265586_at AT2G19990 PR-1-LIKE, pathogenesis-related protein-1-like -0.188 0.009
37 258498_at AT3G02480 [Late embryogenesis abundant protein (LEA) family protein] -0.185 0.073
38 253627_at AT4G30650 [Low temperature and salt responsive protein family] -0.184 -0.146
39 265588_at AT2G19970 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.177 0.143
40 258419_at AT3G16670 [Pollen Ole e 1 allergen and extensin family protein] -0.176 0.148
41 261226_at AT1G20190 ATEXP11, ATEXPA11, expansin 11, ATHEXP ALPHA 1.14, EXP11, EXPANSIN 11, EXPA11, expansin 11 -0.175 -0.028
42 252529_at AT3G46490 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.163 -0.045
43 265083_at AT1G03820 unknown -0.161 -0.088