4.0:Information of module
35S:RPS4 rrs1-11 8h
In comparison with rGRF help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0034976 response to endoplasmic reticulum stress BP 7.584e-16
GO:0000302 response to reactive oxygen species BP 1.914e-12
GO:0042542 response to hydrogen peroxide BP 2.187e-12
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010200 response to chitin BP 1.513e-11
GO:0010243 response to organonitrogen compound BP 3.851e-11
GO:1901698 response to nitrogen compound BP 3.593e-07
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
35S:RPS4 rrs1-11 8h		 Log2 signal ratio
rGRF
1 256018_at AT1G58300 HO4, heme oxygenase 4 0.356 -0.052
2 247946_at AT5G57180 CIA2, chloroplast import apparatus 2 0.338 -0.005
3 266745_at AT2G02950 PKS1, phytochrome kinase substrate 1 0.295 0.052
4 264648_at AT1G09080 BIP3, binding protein 3 0.238 -0.256
5 248028_at AT5G55620 unknown 0.228 -0.111
6 249190_at AT5G42750 BKI1, BRI1 kinase inhibitor 1 0.226 0.019
7 263597_at AT2G01870 unknown 0.225 -0.086
8 256880_at AT3G26450 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] 0.222 0.059
9 265464_at AT2G37080 RIP2, ROP interactive partner 2 0.220 -0.010
10 253158_at AT4G35780 STY17, serine/threonine/tyrosine kinase 17 0.219 0.009
11 264288_at AT1G62045 unknown 0.214 -0.018
12 252612_at AT3G45160 [Putative membrane lipoprotein] 0.208 0.098
13 256825_at AT3G22120 CWLP, cell wall-plasma membrane linker protein 0.192 0.023
14 258809_at AT3G04070 anac047, NAC domain containing protein 47, NAC047, NAC domain containing protein 47 0.186 -0.083
15 248715_at AT5G48290 [Heavy metal transport/detoxification superfamily protein ] 0.186 0.060
16 249282_at AT5G41760 [Nucleotide-sugar transporter family protein] 0.183 -0.025
17 249482_at AT5G38980 unknown 0.181 0.014
18 262162_at AT1G78020 unknown 0.178 -0.026
19 250625_at AT5G07340 [Calreticulin family protein] 0.177 -0.025
20 246209_at AT4G36870 BLH2, BEL1-like homeodomain 2, SAW1, SAWTOOTH 1 0.174 0.005
21 251673_at AT3G57240 AtBG3, BG3, beta-1,3-glucanase 3 0.173 -0.096
22 257314_at AT3G26590 [MATE efflux family protein] 0.172 -0.025
23 255625_at AT4G01120 ATBZIP54, BASIC REGION/LEUCINE ZIPPER MOTIF 5, GBF2, G-box binding factor 2 0.170 0.026
24 266896_at AT2G45810 [DEA(D/H)-box RNA helicase family protein] 0.168 0.006
25 252010_at AT3G52740 unknown 0.164 -0.292
26 266532_at AT2G16890 [UDP-Glycosyltransferase superfamily protein] 0.163 -0.004
27 245506_at AT4G15700 [Thioredoxin superfamily protein] 0.160 -0.073
28 248932_at AT5G46050 AtNPF5.2, ATPTR3, ARABIDOPSIS THALIANA PEPTIDE TRANSPORTER 3, NPF5.2, NRT1/ PTR family 5.2, PTR3, peptide transporter 3 0.157 0.003
29 253636_at AT4G30500 unknown 0.157 -0.016
30 249127_at AT5G43500 ARP9, actin-related protein 9, ATARP9, actin-related protein 9 0.156 -0.016
31 248344_at AT5G52280 [Myosin heavy chain-related protein] 0.152 0.000
32 264260_at AT1G09210 AtCRT1b, CRT1b, calreticulin 1b 0.151 -0.011
33 245901_at AT5G11060 KNAT4, KNOTTED1-like homeobox gene 4 0.148 0.049
34 266578_at AT2G23910 [NAD(P)-binding Rossmann-fold superfamily protein] 0.142 -0.030
35 255487_at AT4G02610 [Aldolase-type TIM barrel family protein] 0.141 0.017
36 257101_at AT3G25020 AtRLP42, receptor like protein 42, RBPG1, response to Botrytis polygalacturonases 1, RLP42, receptor like protein 42 0.139 0.166
37 261609_at AT1G49740 [PLC-like phosphodiesterases superfamily protein] 0.138 -0.049
38 262118_at AT1G02850 BGLU11, beta glucosidase 11 0.135 0.030
39 252319_at AT3G48710 [DEK domain-containing chromatin associated protein] 0.134 -0.033
40 253812_at AT4G28240 [Wound-responsive family protein] 0.134 0.072
41 252822_at AT4G39955 [alpha/beta-Hydrolases superfamily protein] 0.133 0.026
42 250540_at AT5G08580 [Calcium-binding EF hand family protein] 0.131 0.020
43 245027_at AT2G26550 HO2, heme oxygenase 2 0.131 -0.066
44 249944_at AT5G22290 anac089, NAC domain containing protein 89, FSQ6, fructose-sensing quantitative trait locus 6, NAC089, NAC domain containing protein 89 0.129 -0.013
45 245117_at AT2G41560 ACA4, autoinhibited Ca(2+)-ATPase, isoform 4 0.128 0.043
46 259034_at AT3G09410 [Pectinacetylesterase family protein] 0.127 0.018
47 253281_at AT4G34138 UGT73B1, UDP-glucosyl transferase 73B1 0.127 0.032
48 254870_at AT4G11900 [S-locus lectin protein kinase family protein] 0.122 0.019
49 264913_at AT1G60770 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.122 -0.029
50 254424_at AT4G21510 AtFBS2, FBS2, F-box stress induced 2 0.120 0.162
51 259669_at AT1G52340 ABA2, ABA DEFICIENT 2, ATABA2, ARABIDOPSIS THALIANA ABA DEFICIENT 2, ATSDR1, SHORT-CHAIN DEHYDROGENASE/REDUCTASE 1, GIN1, GLUCOSE INSENSITIVE 1, ISI4, IMPAIRED SUCROSE INDUCTION 4, SDR1, SHORT-CHAIN DEHYDROGENASE REDUCTASE 1, SIS4, SUGAR-INSENSITIVE 4, SRE1, SALT RESISTANT 1 0.119 -0.003
52 250975_at AT5G03050 unknown 0.119 -0.048
53 254378_at AT4G21810 DER2.1, DERLIN-2.1 0.119 0.034
54 248303_at AT5G53170 FTSH11, FTSH protease 11 0.117 0.001
55 255068_at AT4G08920 ATCRY1, BLU1, BLUE LIGHT UNINHIBITED 1, CRY1, cryptochrome 1, HY4, ELONGATED HYPOCOTYL 4, OOP2, OUT OF PHASE 2 0.117 0.031
56 260592_at AT1G55850 ATCSLE1, CSLE1, cellulose synthase like E1 0.115 0.100
57 258984_at AT3G08970 ATERDJ3A, TMS1, THERMOSENSITIVE MALE STERILE 1 0.115 -0.137
58 256379_at AT1G66840 PMI2, plastid movement impaired 2, WEB2, WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 2 0.115 -0.111
59 252092_at AT3G51420 ATSSL4, STRICTOSIDINE SYNTHASE-LIKE 4, SSL4, strictosidine synthase-like 4 0.114 -0.031
60 254231_at AT4G23810 ATWRKY53, WRKY53 0.114 0.123
61 246951_at AT5G04880 [expressed protein] 0.114 -0.047
62 249843_at AT5G23570 ATSGS3, SUPPRESSOR OF GENE SILENCING 3, SGS3, SUPPRESSOR OF GENE SILENCING 3 0.114 0.081
63 249780_at AT5G24240 [Phosphatidylinositol 3- and 4-kinase ] -0.933 0.051
64 246556_at AT5G15480 [C2H2-type zinc finger family protein] -0.403 0.051
65 254252_at AT4G23310 CRK23, cysteine-rich RLK (RECEPTOR-like protein kinase) 23 -0.351 0.012
66 263948_at AT2G35980 ATNHL10, ARABIDOPSIS NDR1/HIN1-LIKE 10, NHL10, NDR1/HIN1-LIKE, YLS9, YELLOW-LEAF-SPECIFIC GENE 9 -0.311 0.021
67 245567_at AT4G14630 GLP9, germin-like protein 9 -0.305 0.050
68 249940_at AT5G22380 anac090, NAC domain containing protein 90, NAC090, NAC domain containing protein 90 -0.291 -0.097
69 264297_at AT1G78710 TBL42, TRICHOME BIREFRINGENCE-LIKE 42 -0.278 0.016
70 247727_at AT5G59490 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] -0.276 0.054
71 252950_at AT4G38690 [PLC-like phosphodiesterases superfamily protein] -0.265 0.040
72 267032_at AT2G38490 CIPK22, CBL-interacting protein kinase 22, SnRK3.19, SNF1-RELATED PROTEIN KINASE 3.19 -0.258 0.027
73 247145_at AT5G65600 LecRK-IX.2, L-type lectin receptor kinase IX.2 -0.251 0.059
74 246145_at AT5G19880 [Peroxidase superfamily protein] -0.248 0.030
75 246984_at AT5G67310 CYP81G1, cytochrome P450, family 81, subfamily G, polypeptide 1 -0.242 -0.029
76 254015_at AT4G26140 BGAL12, beta-galactosidase 12 -0.241 0.069
77 255086_at AT4G09300 [LisH and RanBPM domains containing protein] -0.230 0.115
78 266962_at AT2G39435 TRM18, TON1 Recruiting Motif 18 -0.226 -0.027
79 266052_at AT2G40740 ATWRKY55, WRKY DNA-BINDING PROTEIN 55, WRKY55, WRKY DNA-binding protein 55 -0.213 0.024
80 254916_at AT4G11340 [Disease resistance protein (TIR-NBS-LRR class) family] -0.205 -0.048
81 256190_at AT1G30100 ATNCED5, NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 5, NCED5, nine-cis-epoxycarotenoid dioxygenase 5 -0.204 -0.017
82 266571_at AT2G23830 [PapD-like superfamily protein] -0.199 0.014
83 248611_at AT5G49520 ATWRKY48, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 48, WRKY48, WRKY DNA-binding protein 48 -0.197 0.039
84 263486_at AT2G22200 [Integrase-type DNA-binding superfamily protein] -0.196 0.020
85 252827_at AT4G39950 CYP79B2, cytochrome P450, family 79, subfamily B, polypeptide 2 -0.193 0.208
86 266326_at AT2G46650 ATCB5-C, ARABIDOPSIS CYTOCHROME B5 ISOFORM C, B5 #1, CB5-C, cytochrome B5 isoform C, CYTB5-C -0.186 0.099
87 252596_at AT3G45330 LecRK-I.1, L-type lectin receptor kinase I.1 -0.180 0.053
88 262085_at AT1G56060 unknown -0.178 0.037
89 261005_at AT1G26420 [FAD-binding Berberine family protein] -0.176 0.169
90 264005_at AT2G22470 AGP2, arabinogalactan protein 2, ATAGP2 -0.175 -0.041
91 259735_at AT1G64405 unknown -0.174 0.060
92 247064_at AT5G66890 [Leucine-rich repeat (LRR) family protein] -0.173 0.041
93 257978_at AT3G20860 ATNEK5, NIMA-related kinase 5, NEK5, NIMA-related kinase 5 -0.171 -0.003
94 254689_at AT4G13710 [Pectin lyase-like superfamily protein] -0.167 -0.048
95 246498_at AT5G16230 [Plant stearoyl-acyl-carrier-protein desaturase family protein] -0.166 -0.064
96 256871_at AT3G26480 [Transducin family protein / WD-40 repeat family protein] -0.165 -0.033
97 265547_at AT2G28305 ATLOG1, LOG1, LONELY GUY 1 -0.161 -0.001
98 263150_at AT1G54050 [HSP20-like chaperones superfamily protein] -0.161 -0.024
99 250200_at AT5G14130 [Peroxidase superfamily protein] -0.161 0.016
100 256839_at AT3G22930 AtCML11, CML11, calmodulin-like 11 -0.160 0.050
101 255773_at AT1G18590 ATSOT17, SULFOTRANSFERASE 17, ATST5C, ARABIDOPSIS SULFOTRANSFERASE 5C, SOT17, sulfotransferase 17 -0.160 0.077
102 254300_at AT4G22780 ACR7, ACT domain repeat 7 -0.159 0.034
103 246992_at AT5G67430 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] -0.157 0.041
104 246123_at AT5G20390 [Glycosyl hydrolase superfamily protein] -0.153 0.018
105 266316_at AT2G27080 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] -0.153 -0.071
106 260802_at AT1G78400 [Pectin lyase-like superfamily protein] -0.153 0.013
107 258529_at AT3G06740 GATA15, GATA transcription factor 15 -0.151 -0.058
108 254235_at AT4G23750 CRF2, cytokinin response factor 2, TMO3, TARGET OF MONOPTEROS 3 -0.150 -0.085
109 249576_at AT5G37690 [SGNH hydrolase-type esterase superfamily protein] -0.145 0.054
110 262358_at AT1G73050 [Glucose-methanol-choline (GMC) oxidoreductase family protein] -0.142 0.025
111 253815_at AT4G28250 ATEXPB3, expansin B3, ATHEXP BETA 1.6, EXPB3, expansin B3 -0.141 0.019
112 266447_at AT2G43290 MSS3, multicopy suppressors of snf4 deficiency in yeast 3 -0.140 -0.001
113 253318_at AT4G33970 [Leucine-rich repeat (LRR) family protein] -0.140 0.093
114 251766_at AT3G55910 unknown -0.138 0.003
115 255648_at AT4G00910 [Aluminium activated malate transporter family protein] -0.138 -0.046
116 259377_at AT3G16380 PAB6, poly(A) binding protein 6 -0.137 0.023
117 256177_at AT1G51620 [Protein kinase superfamily protein] -0.136 -0.019
118 247776_at AT5G58700 ATPLC4, PLC4, phosphatidylinositol-speciwc phospholipase C4 -0.135 -0.000
119 265205_at AT2G36660 PAB7, poly(A) binding protein 7 -0.135 -0.045
120 259405_at AT1G17744 unknown -0.132 0.030
121 261785_at AT1G08230 [Transmembrane amino acid transporter family protein] -0.131 0.015
122 250537_at AT5G08565 [Transcription initiation Spt4-like protein] -0.130 -0.055
123 251191_at AT3G62590 [alpha/beta-Hydrolases superfamily protein] -0.130 -0.060