4.0:Information of module
35S:RPS4 eds1-2 2h
In comparison with spx1 spx2 resupplied Pi 4h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009628 response to abiotic stimulus BP 9.298e-09
GO:0050896 response to stimulus BP 3.762e-08
GO:0009813 flavonoid biosynthetic process BP 1.098e-07
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010243 response to organonitrogen compound BP 2.098e-101
GO:0010200 response to chitin BP 3.886e-101
GO:0009719 response to endogenous stimulus BP 2.782e-83
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
35S:RPS4 eds1-2 2h		 Log2 signal ratio
spx1 spx2 resupplied Pi 4h
1 255437_at AT4G03060 AOP2, alkenyl hydroxalkyl producing 2 0.542 0.240
2 252663_at AT3G44070 [Glycosyl hydrolase family 35 protein] 0.456 0.059
3 263545_at AT2G21560 unknown 0.411 -0.162
4 262396_at AT1G49470 unknown 0.327 0.248
5 258851_at AT3G03190 ATGSTF11, glutathione S-transferase F11, ATGSTF6, ARABIDOPSIS GLUTATHIONE-S-TRANSFERASE 6, GSTF11, glutathione S-transferase F11 0.314 0.143
6 249606_at AT5G37260 CIR1, CIRCADIAN 1, RVE2, REVEILLE 2 0.300 -0.139
7 267238_at AT2G44130 KMD3, KISS ME DEADLY 3 0.296 0.242
8 246566_at AT5G14940 [Major facilitator superfamily protein] 0.289 0.050
9 259520_at AT1G12320 unknown 0.264 0.025
10 263438_at AT2G28660 [Chloroplast-targeted copper chaperone protein] 0.250 0.019
11 265057_at AT1G52140 unknown 0.247 0.058
12 260770_at AT1G49200 [RING/U-box superfamily protein] 0.242 0.147
13 263318_at AT2G24762 AtGDU4, glutamine dumper 4, GDU4, glutamine dumper 4 0.237 0.140
14 250598_at AT5G07690 ATMYB29, myb domain protein 29, MYB29, myb domain protein 29, PMG2, PRODUCTION OF METHIONINE-DERIVED GLUCOSINOLATE 2 0.236 0.090
15 245422_at AT4G17470 [alpha/beta-Hydrolases superfamily protein] 0.218 -0.075
16 245560_at AT4G15480 UGT84A1 0.208 -0.068
17 258935_at AT3G10120 unknown 0.203 -0.168
18 266322_at AT2G46690 SAUR32, SMALL AUXIN UPREGULATED RNA 32 0.203 0.116
19 247600_at AT5G60890 ATMYB34, ATR1, ALTERED TRYPTOPHAN REGULATION 1, MYB34, myb domain protein 34 0.202 0.009
20 255284_at AT4G04610 APR, APR1, APS reductase 1, ATAPR1, PRH19, PAPS REDUCTASE HOMOLOG 19 0.196 0.033
21 260059_at AT1G78090 ATTPPB, Arabidopsis thaliana trehalose-6-phosphate phosphatase B, TPPB, trehalose-6-phosphate phosphatase B 0.190 0.066
22 251144_at AT5G01210 [HXXXD-type acyl-transferase family protein] 0.184 0.077
23 261866_at AT1G50420 SCL-3, SCARECROW-LIKE 3, SCL3, scarecrow-like 3 0.183 0.012
24 260799_at AT1G78270 AtUGT85A4, UDP-glucosyl transferase 85A4, UGT85A4, UDP-glucosyl transferase 85A4 0.180 0.115
25 260903_at AT1G02460 [Pectin lyase-like superfamily protein] 0.175 0.129
26 246522_at AT5G15830 AtbZIP3, basic leucine-zipper 3, bZIP3, basic leucine-zipper 3 0.172 -0.113
27 247549_at AT5G61420 AtMYB28, HAG1, HIGH ALIPHATIC GLUCOSINOLATE 1, MYB28, myb domain protein 28, PMG1, PRODUCTION OF METHIONINE-DERIVED GLUCOSINOLATE 1 0.171 0.081
28 245637_at AT1G25230 [Calcineurin-like metallo-phosphoesterase superfamily protein] 0.169 0.107
29 247625_at AT5G60200 TMO6, TARGET OF MONOPTEROS 6 0.168 0.111
30 257876_at AT3G17130 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.168 0.093
31 252712_at AT3G43800 ATGSTU27, glutathione S-transferase tau 27, GSTU27, glutathione S-transferase tau 27 0.167 -0.079
32 246125_at AT5G19875 unknown 0.167 0.071
33 252870_at AT4G39940 AKN2, APS-kinase 2, APK2, ADENOSINE-5'-PHOSPHOSULFATE (APS) KINASE 2 0.165 0.087
34 252178_at AT3G50750 BEH1, BES1/BZR1 homolog 1 0.163 0.179
35 260812_at AT1G43650 UMAMIT22, Usually multiple acids move in and out Transporters 22 0.162 0.091
36 245465_at AT4G16590 ATCSLA01, cellulose synthase-like A01, ATCSLA1, CELLULOSE SYNTHASE-LIKE A1, CSLA01, CSLA01, cellulose synthase-like A01 0.157 -0.130
37 249800_at AT5G23660 AtSWEET12, MTN3, homolog of Medicago truncatula MTN3, SWEET12 0.156 0.061
38 249190_at AT5G42750 BKI1, BRI1 kinase inhibitor 1 0.155 -0.002
39 247976_at AT5G56830 [copia-like retrotransposon family, has a 8.7e-14 P-value blast match to gb|AAO73521.1| gag-pol polyprotein (Glycine max) (SIRE1) (Ty1_Copia-family)] 0.154 -0.010
40 260385_at AT1G74090 ATSOT18, DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18, ATST5B, ARABIDOPSIS SULFOTRANSFERASE 5B, SOT18, desulfo-glucosinolate sulfotransferase 18 0.151 0.120
41 247040_at AT5G67150 [HXXXD-type acyl-transferase family protein] 0.151 0.105
42 258890_at AT3G05690 ATHAP2B, HEME ACTIVATOR PROTEIN (YEAST) HOMOLOG 2B, HAP2B, HEME ACTIVATOR PROTEIN (YEAST) HOMOLOG 2B, NF-YA2, nuclear factor Y, subunit A2, UNE8, UNFERTILIZED EMBRYO SAC 8 0.150 0.144
43 262703_at AT1G16510 SAUR41, SMALL AUXIN UPREGULATED 41 0.148 0.132
44 245126_at AT2G47460 ATMYB12, MYB DOMAIN PROTEIN 12, MYB12, myb domain protein 12, PFG1, PRODUCTION OF FLAVONOL GLYCOSIDES 1 0.147 -0.038
45 259640_at AT1G52400 ATBG1, A. THALIANA BETA-GLUCOSIDASE 1, BGL1, BETA-GLUCOSIDASE HOMOLOG 1, BGLU18, beta glucosidase 18 0.145 -0.031
46 262388_at AT1G49320 unknown 0.144 0.038
47 250099_at AT5G17300 RVE1, REVEILLE 1 0.143 -0.063
48 252622_at AT3G45310 [Cysteine proteinases superfamily protein] 0.142 0.078
49 266125_at AT2G45050 GATA2, GATA transcription factor 2 0.140 0.115
50 259996_at AT1G67910 unknown 0.140 0.084
51 246216_at AT4G36380 ROT3, ROTUNDIFOLIA 3 0.138 -0.002
52 249211_at AT5G42680 unknown 0.134 0.081
53 252594_at AT3G45680 [Major facilitator superfamily protein] 0.132 0.075
54 257226_at AT3G27880 unknown 0.131 0.067
55 266637_at AT2G35600 ATBRXL1, ARABIDOPSIS THALIANA BREVIS RADIX LIKE 1, BRXL1, BREVIS RADIX-like 1 0.131 -0.027
56 265253_at AT2G02020 AtNPF8.4, AtPTR4, NPF8.4, NRT1/ PTR family 8.4, PTR4, peptide transporter 4 0.128 0.094
57 253475_at AT4G32290 [Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein] 0.127 0.116
58 253657_at AT4G30110 ATHMA2, ARABIDOPSIS HEAVY METAL ATPASE 2, HMA2, heavy metal atpase 2 0.126 0.427
59 253965_at AT4G26490 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] 0.126 0.043
60 266320_at AT2G46640 TAC1, Tiller Angle Control 1 0.125 0.008
61 248596_at AT5G49330 ATMYB111, ARABIDOPSIS MYB DOMAIN PROTEIN 111, MYB111, myb domain protein 111, PFG3, PRODUCTION OF FLAVONOL GLYCOSIDES 3 0.125 0.079
62 261826_at AT1G11580 ATPMEPCRA, PMEPCRA, methylesterase PCR A 0.124 0.038
63 252424_at AT3G47610 [transcription regulators] 0.124 -0.095
64 257654_at AT3G13310 DJC66, DNA J protein C66 0.124 0.111
65 250160_at AT5G15210 ATHB30, homeobox protein 30, HB30, homeobox protein 30, ZFHD3, ZINC FINGER HOMEODOMAIN 3, ZHD8, ZINC FINGER HOMEODOMAIN 8 0.121 0.091
66 249008_at AT5G44680 [DNA glycosylase superfamily protein] 0.120 -0.001
67 264551_at AT1G09460 [Carbohydrate-binding X8 domain superfamily protein] 0.120 0.045
68 246832_at AT5G26600 [Pyridoxal phosphate (PLP)-dependent transferases superfamily protein] 0.118 0.072
69 257543_at AT3G28960 [Transmembrane amino acid transporter family protein] 0.118 0.083
70 255795_at AT2G33380 AtCLO3, Arabidopsis thaliana caleosin 3, CLO-3, caleosin 3, CLO3, caleosin 3, RD20, RESPONSIVE TO DESSICATION 20 0.118 0.062
71 256528_at AT1G66140 ZFP4, zinc finger protein 4 0.117 0.062
72 266363_at AT2G41250 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] 0.116 0.062
73 246580_at AT1G31770 ABCG14, ATP-binding cassette G14 0.116 0.054
74 263320_at AT2G47180 AtGolS1, galactinol synthase 1, GolS1, galactinol synthase 1 0.115 0.127
75 256931_at AT3G22490 [Seed maturation protein] 0.114 0.068
76 255198_at AT4G07460 unknown 0.112 0.038
77 251326_at AT3G61590 HS, HWS, HAWAIIAN SKIRT 0.112 0.041
78 259960_at AT1G53710 [Calcineurin-like metallo-phosphoesterase superfamily protein] 0.112 -0.014
79 246016_at AT5G10720 AHK5, histidine kinase 5, CKI2, CYTOKININ INDEPENDENT 2, HK5, histidine kinase 5 0.112 -0.170
80 258369_at AT3G14310 ATPME3, pectin methylesterase 3, OZS2, OVERLY ZINC SENSITIVE 2, PME3, pectin methylesterase 3 0.110 0.039
81 262166_at AT1G74840 [Homeodomain-like superfamily protein] 0.110 0.037
82 260693_at AT1G32450 AtNPF7.3, NPF7.3, NRT1/ PTR family 7.3, NRT1.5, nitrate transporter 1.5 0.109 -0.084
83 248322_at AT5G52760 [Copper transport protein family] -1.358 -0.204
84 252549_at AT3G45860 CRK4, cysteine-rich RLK (RECEPTOR-like protein kinase) 4 -1.302 0.060
85 245755_at AT1G35210 unknown -1.259 -0.385
86 248164_at AT5G54490 PBP1, pinoid-binding protein 1 -1.238 -0.324
87 251336_at AT3G61190 BAP1, BON association protein 1 -1.226 -0.392
88 252131_at AT3G50930 BCS1, cytochrome BC1 synthesis -1.199 -0.639
89 249417_at AT5G39670 [Calcium-binding EF-hand family protein] -1.137 -0.251
90 266821_at AT2G44840 ATERF13, ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13, EREBP, ERF13, ethylene-responsive element binding factor 13 -1.133 -0.724
91 262382_at AT1G72920 [Toll-Interleukin-Resistance (TIR) domain family protein] -1.125 -0.431
92 258377_at AT3G17690 ATCNGC19, CYCLIC NUCLEOTIDE-GATED CHANNEL 19, CNGC19, cyclic nucleotide gated channel 19 -1.124 -0.209
93 266010_at AT2G37430 ZAT11, zinc finger of Arabidopsis thaliana 11 -1.113 -0.117
94 265725_at AT2G32030 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] -1.086 -0.193
95 263182_at AT1G05575 unknown -1.071 -0.288
96 249197_at AT5G42380 CML37, calmodulin like 37 -1.067 -0.632
97 261892_at AT1G80840 ATWRKY40, WRKY40, WRKY DNA-binding protein 40 -1.065 -0.469
98 252703_at AT3G43740 [Leucine-rich repeat (LRR) family protein] -1.048 -0.007
99 248726_at AT5G47960 ATRABA4C, RAB GTPase homolog A4C, RABA4C, RAB GTPase homolog A4C, SMG1, SMALL MOLECULAR WEIGHT G-PROTEIN 1 -1.044 -0.133
100 245250_at AT4G17490 ATERF6, ethylene responsive element binding factor 6, ERF-6-6, ERF6, ethylene responsive element binding factor 6 -1.039 -0.358
101 265723_at AT2G32140 [transmembrane receptors] -1.017 -0.327
102 252648_at AT3G44630 [Disease resistance protein (TIR-NBS-LRR class) family] -1.013 -0.128
103 263783_at AT2G46400 ATWRKY46, WRKY DNA-BINDING PROTEIN 46, WRKY46, WRKY DNA-binding protein 46 -1.006 -0.611
104 258947_at AT3G01830 [Calcium-binding EF-hand family protein] -0.956 -0.431
105 247543_at AT5G61600 ERF104, ethylene response factor 104 -0.950 -0.296
106 259879_at AT1G76650 CML38, calmodulin-like 38 -0.947 -0.641
107 258653_at AT3G09870 SAUR48, SMALL AUXIN UPREGULATED RNA 48 -0.947 -0.437
108 264866_at AT1G24140 [Matrixin family protein] -0.942 -0.078
109 261984_at AT1G33760 [Integrase-type DNA-binding superfamily protein] -0.928 -0.540
110 256442_at AT3G10930 unknown -0.919 -0.337
111 248448_at AT5G51190 [Integrase-type DNA-binding superfamily protein] -0.912 -0.380
112 262381_at AT1G72900 [Toll-Interleukin-Resistance (TIR) domain-containing protein] -0.908 -0.169
113 255753_at AT1G18570 AtMYB51, myb domain protein 51, BW51A, BW51B, HIG1, HIGH INDOLIC GLUCOSINOLATE 1, MYB51, myb domain protein 51 -0.897 -0.208
114 256526_at AT1G66090 [Disease resistance protein (TIR-NBS class)] -0.893 -0.225
115 245711_at AT5G04340 C2H2, CZF2, COLD INDUCED ZINC FINGER PROTEIN 2, ZAT6, zinc finger of Arabidopsis thaliana 6 -0.876 -0.108
116 261449_at AT1G21120 IGMT2, indole glucosinolate O-methyltransferase 2 -0.873 -0.171
117 261476_at AT1G14480 [Ankyrin repeat family protein] -0.869 -0.294
118 263584_at AT2G17040 anac036, NAC domain containing protein 36, NAC036, NAC domain containing protein 36 -0.866 -0.137
119 248327_at AT5G52750 [Heavy metal transport/detoxification superfamily protein ] -0.861 -0.077
120 246777_at AT5G27420 ATL31, Arabidopsis toxicos en levadura 31, CNI1, carbon/nitrogen insensitive 1 -0.857 -0.042
121 247208_at AT5G64870 [SPFH/Band 7/PHB domain-containing membrane-associated protein family] -0.845 -0.378
122 265597_at AT2G20142 [Toll-Interleukin-Resistance (TIR) domain family protein] -0.843 -0.135
123 252485_at AT3G46530 RPP13, RECOGNITION OF PERONOSPORA PARASITICA 13 -0.832 -0.267
124 252060_at AT3G52430 ATPAD4, ARABIDOPSIS PHYTOALEXIN DEFICIENT 4, PAD4, PHYTOALEXIN DEFICIENT 4 -0.827 -0.111
125 252373_at AT3G48090 ATEDS1, EDS1, enhanced disease susceptibility 1 -0.813 -0.242
126 260804_at AT1G78410 [VQ motif-containing protein] -0.807 0.029
127 246821_at AT5G26920 CBP60G, Cam-binding protein 60-like G -0.787 -0.161
128 263379_at AT2G40140 ATSZF2, CZF1, SZF2, (SALT-INDUCIBLE ZINC FINGER 2, ZFAR1 -0.782 -0.210
129 249896_at AT5G22530 unknown -0.767 -0.102
130 247047_at AT5G66650 unknown -0.761 -0.400
131 252659_at AT3G44430 unknown -0.757 0.055
132 253643_at AT4G29780 unknown -0.749 -0.493
133 264758_at AT1G61340 AtFBS1, FBS1, F-box stress induced 1 -0.749 -0.453
134 248123_at AT5G54720 [Ankyrin repeat family protein] -0.746 -0.257
135 248799_at AT5G47230 ATERF-5, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR- 5, ATERF5, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 5, AtMACD1, ERF102, ERF5, ethylene responsive element binding factor 5 -0.734 -0.237
136 267028_at AT2G38470 ATWRKY33, WRKY DNA-BINDING PROTEIN 33, WRKY33, WRKY DNA-binding protein 33 -0.720 -0.374
137 259850_at AT1G72240 unknown -0.712 -0.321
138 252520_at AT3G46370 [Leucine-rich repeat protein kinase family protein] -0.711 0.073
139 245119_at AT2G41640 [Glycosyltransferase family 61 protein] -0.707 -0.406
140 258436_at AT3G16720 ATL2, TOXICOS EN LEVADURA 2, TL2, TOXICOS EN LEVADURA 2 -0.688 -0.151
141 253915_at AT4G27280 [Calcium-binding EF-hand family protein] -0.688 -0.249
142 256833_at AT3G22910 [ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein] -0.683 -0.108
143 259428_at AT1G01560 ATMPK11, MAP kinase 11, MPK11, MAP kinase 11 -0.670 -0.271
144 261648_at AT1G27730 STZ, salt tolerance zinc finger, ZAT10 -0.660 -0.240
145 267623_at AT2G39650 unknown -0.659 -0.194
146 245041_at AT2G26530 AR781 -0.653 -0.293
147 252170_at AT3G50480 HR4, homolog of RPW8 4 -0.650 -0.053
148 247071_at AT5G66640 DAR3, DA1-related protein 3 -0.649 -0.143
149 252908_at AT4G39670 [Glycolipid transfer protein (GLTP) family protein] -0.648 -0.105
150 258787_at AT3G11840 PUB24, plant U-box 24 -0.640 -0.060
151 251054_at AT5G01540 LecRK-VI.2, L-type lectin receptor kinase-VI.2, LECRKA4.1, lectin receptor kinase a4.1 -0.631 -0.105
152 259992_at AT1G67970 AT-HSFA8, HSFA8, heat shock transcription factor A8 -0.626 -0.271
153 254408_at AT4G21390 B120 -0.623 -0.077
154 252346_at AT3G48650 [pseudogene] -0.622 -0.322
155 252679_at AT3G44260 AtCAF1a, CCR4- associated factor 1a, CAF1a, CCR4- associated factor 1a -0.622 -0.335
156 260904_at AT1G02450 NIMIN-1, NIMIN1, NIM1-interacting 1 -0.622 -0.188
157 262383_at AT1G72940 [Toll-Interleukin-Resistance (TIR) domain-containing protein] -0.619 -0.282
158 254042_at AT4G25810 XTH23, xyloglucan endotransglucosylase/hydrolase 23, XTR6, xyloglucan endotransglycosylase 6 -0.618 -0.073
159 266259_at AT2G27830 unknown -0.617 -0.014
160 256306_at AT1G30370 DLAH, DAD1-like acylhydrolase -0.617 -0.362
161 251884_at AT3G54150 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.615 -0.152
162 248964_at AT5G45340 CYP707A3, cytochrome P450, family 707, subfamily A, polypeptide 3 -0.613 -0.493
163 246293_at AT3G56710 SIB1, sigma factor binding protein 1 -0.608 -0.301