4.0:Information of module
ein2-1 9 hpi A. brassicicola
In comparison with WT 2-4h Xanthomonas help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010200 response to chitin BP 8.758e-97
GO:0010243 response to organonitrogen compound BP 1.460e-95
GO:0010033 response to organic substance BP 9.223e-95
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0019252 starch biosynthetic process BP 1.419e-11
GO:0000023 maltose metabolic process BP 3.036e-11
GO:0005982 starch metabolic process BP 4.970e-11
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
ein2-1 9 hpi A. brassicicola		 Log2 signal ratio
WT 2-4h Xanthomonas
1 249333_at AT5G40990 GLIP1, GDSL lipase 1 1.501 0.083
2 260706_at AT1G32350 AOX1D, alternative oxidase 1D 1.318 0.471
3 253044_at AT4G37290 unknown 1.306 0.463
4 263231_at AT1G05680 UGT74E2, Uridine diphosphate glycosyltransferase 74E2 1.276 0.270
5 261021_at AT1G26380 [FAD-binding Berberine family protein] 1.270 0.969
6 252265_at AT3G49620 DIN11, DARK INDUCIBLE 11 1.221 0.260
7 261449_at AT1G21120 IGMT2, indole glucosinolate O-methyltransferase 2 1.216 0.091
8 255110_at AT4G08770 Prx37, peroxidase 37 1.215 0.197
9 247215_at AT5G64905 PROPEP3, elicitor peptide 3 precursor 1.200 0.760
10 267565_at AT2G30750 CYP71A12, cytochrome P450, family 71, subfamily A, polypeptide 12 1.198 0.497
11 245976_at AT5G13080 ATWRKY75, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 75, WRKY75, WRKY DNA-binding protein 75 1.182 0.276
12 247435_at AT5G62480 ATGSTU9, glutathione S-transferase tau 9, GST14, GLUTATHIONE S-TRANSFERASE 14, GST14B, GLUTATHIONE S-TRANSFERASE 14B, GSTU9, glutathione S-transferase tau 9 1.172 0.252
13 261005_at AT1G26420 [FAD-binding Berberine family protein] 1.167 1.114
14 258606_at AT3G02840 [ARM repeat superfamily protein] 1.160 1.082
15 266010_at AT2G37430 ZAT11, zinc finger of Arabidopsis thaliana 11 1.139 0.798
16 263402_at AT2G04050 [MATE efflux family protein] 1.132 -0.028
17 262518_at AT1G17170 ATGSTU24, glutathione S-transferase TAU 24, GST, Arabidopsis thaliana Glutathione S-transferase (class tau) 24, GSTU24, glutathione S-transferase TAU 24 1.102 0.242
18 253796_at AT4G28460 unknown 1.095 0.051
19 263401_at AT2G04070 [MATE efflux family protein] 1.077 0.052
20 263948_at AT2G35980 ATNHL10, ARABIDOPSIS NDR1/HIN1-LIKE 10, NHL10, NDR1/HIN1-LIKE, YLS9, YELLOW-LEAF-SPECIFIC GENE 9 1.075 0.955
21 248434_at AT5G51440 [HSP20-like chaperones superfamily protein] 1.074 1.269
22 264580_at AT1G05340 unknown 1.074 0.453
23 261020_at AT1G26390 [FAD-binding Berberine family protein] 1.073 0.133
24 261899_at AT1G80820 ATCCR2, CCR2, cinnamoyl coa reductase 1.068 0.851
25 257540_at AT3G21520 AtDMP1, Arabidopsis thaliana DUF679 domain membrane protein 1, DMP1, DUF679 domain membrane protein 1 1.067 0.118
26 247026_at AT5G67080 MAPKKK19, mitogen-activated protein kinase kinase kinase 19 1.055 0.314
27 256012_at AT1G19250 FMO1, flavin-dependent monooxygenase 1 1.051 0.487
28 261006_at AT1G26410 [FAD-binding Berberine family protein] 1.049 0.367
29 263403_at AT2G04040 ATDTX1, DTX1, detoxification 1, TX1 1.042 0.055
30 246370_at AT1G51920 unknown 1.039 0.919
31 266995_at AT2G34500 CYP710A1, cytochrome P450, family 710, subfamily A, polypeptide 1 1.038 0.633
32 249197_at AT5G42380 CML37, calmodulin like 37 1.016 1.171
33 248934_at AT5G46080 [Protein kinase superfamily protein] 1.015 0.142
34 266267_at AT2G29460 ATGSTU4, glutathione S-transferase tau 4, GST22, GLUTATHIONE S-TRANSFERASE 22, GSTU4, glutathione S-transferase tau 4 1.012 0.758
35 252908_at AT4G39670 [Glycolipid transfer protein (GLTP) family protein] 1.012 1.076
36 245082_at AT2G23270 unknown 1.009 0.119
37 260406_at AT1G69920 ATGSTU12, ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 12, GSTU12, glutathione S-transferase TAU 12 1.004 -0.073
38 261459_at AT1G21100 IGMT1, indole glucosinolate O-methyltransferase 1 1.000 0.242
39 256442_at AT3G10930 unknown 0.998 0.712
40 253416_at AT4G33070 AtPDC1, PDC1, pyruvate decarboxylase 1 0.997 0.016
41 249770_at AT5G24110 ATWRKY30, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 30, WRKY30, WRKY DNA-binding protein 30 0.997 0.936
42 260225_at AT1G74590 ATGSTU10, GLUTATHIONE S-TRANSFERASE TAU 10, GSTU10, glutathione S-transferase TAU 10 0.985 0.249
43 264400_at AT1G61800 ATGPT2, ARABIDOPSIS GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, GPT2, glucose-6-phosphate/phosphate translocator 2 0.984 0.892
44 265260_at AT2G43000 ANAC042, NAC domain containing protein 42, JUB1, JUNGBRUNNEN 1, NAC042, NAC domain containing protein 42 0.982 0.145
45 257774_at AT3G29250 AtSDR4, SDR4, short-chain dehydrogenase reductase 4 0.959 0.032
46 254241_at AT4G23190 AT-RLK3, RECEPTOR LIKE PROTEIN KINASE 3, CRK11, cysteine-rich RLK (RECEPTOR-like protein kinase) 11 0.958 1.110
47 245447_at AT4G16820 DALL1, DAD1-Like Lipase 1, PLA-I{beta]2, phospholipase A I beta 2 0.956 0.159
48 258203_at AT3G13950 unknown 0.946 0.984
49 254408_at AT4G21390 B120 0.946 0.927
50 262229_at AT1G68620 [alpha/beta-Hydrolases superfamily protein] 0.942 0.491
51 250983_at AT5G02780 GSTL1, glutathione transferase lambda 1 0.935 0.475
52 253046_at AT4G37370 CYP81D8, cytochrome P450, family 81, subfamily D, polypeptide 8 0.933 0.664
53 263935_at AT2G35930 AtPUB23, PUB23, plant U-box 23 0.929 0.902
54 250493_at AT5G09800 [ARM repeat superfamily protein] 0.928 0.364
55 260405_at AT1G69930 ATGSTU11, glutathione S-transferase TAU 11, GSTU11, glutathione S-transferase TAU 11 0.924 0.491
56 254673_at AT4G18430 AtRABA1e, RAB GTPase homolog A1E, RABA1e, RAB GTPase homolog A1E 0.919 0.615
57 264616_at AT2G17740 [Cysteine/Histidine-rich C1 domain family protein] 0.914 1.045
58 265725_at AT2G32030 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] 0.914 0.770
59 245755_at AT1G35210 unknown 0.912 0.911
60 254215_at AT4G23700 ATCHX17, cation/H+ exchanger 17, CHX17, cation/H+ exchanger 17 0.912 0.230
61 258947_at AT3G01830 [Calcium-binding EF-hand family protein] 0.907 1.358
62 245148_at AT2G45220 PME17, pectin methylesterase 17 0.901 0.340
63 263228_at AT1G30700 [FAD-binding Berberine family protein] 0.898 0.980
64 246984_at AT5G67310 CYP81G1, cytochrome P450, family 81, subfamily G, polypeptide 1 0.896 0.163
65 261474_at AT1G14540 PER4, peroxidase 4 0.895 0.503
66 251884_at AT3G54150 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.895 0.619
67 261892_at AT1G80840 ATWRKY40, WRKY40, WRKY DNA-binding protein 40 0.882 0.960
68 256252_at AT3G11340 UGT76B1, UDP-dependent glycosyltransferase 76B1 0.879 0.791
69 250090_at AT5G17330 GAD, glutamate decarboxylase, GAD1, GLUTAMATE DECARBOXYLASE 1 0.876 0.594
70 261763_at AT1G15520 ABCG40, ATP-binding cassette G40, ATABCG40, Arabidopsis thaliana ATP-binding cassette G40, ATPDR12, PLEIOTROPIC DRUG RESISTANCE 12, PDR12, pleiotropic drug resistance 12 0.876 0.678
71 259879_at AT1G76650 CML38, calmodulin-like 38 0.874 0.773
72 249481_at AT5G38900 [Thioredoxin superfamily protein] 0.873 0.801
73 266752_at AT2G47000 ABCB4, ATP-binding cassette B4, AtABCB4, ATPGP4, ARABIDOPSIS P-GLYCOPROTEIN 4, MDR4, MULTIDRUG RESISTANCE 4, PGP4, P-GLYCOPROTEIN 4 0.869 0.068
74 265723_at AT2G32140 [transmembrane receptors] 0.865 0.580
75 258277_at AT3G26830 CYP71B15, PAD3, PHYTOALEXIN DEFICIENT 3 0.862 1.037
76 247487_at AT5G62150 [peptidoglycan-binding LysM domain-containing protein] 0.845 0.144
77 251176_at AT3G63380 [ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein] 0.840 0.868
78 267567_at AT2G30770 CYP71A13, cytochrome P450, family 71, subfamily A, polypeptide 13 0.839 0.566
79 266292_at AT2G29350 SAG13, senescence-associated gene 13 0.839 0.428
80 247949_at AT5G57220 CYP81F2, cytochrome P450, family 81, subfamily F, polypeptide 2 0.838 0.847
81 245662_at AT1G28190 unknown 0.838 0.659
82 254819_at AT4G12500 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.835 0.970
83 246777_at AT5G27420 ATL31, Arabidopsis toxicos en levadura 31, CNI1, carbon/nitrogen insensitive 1 0.830 0.819
84 255340_at AT4G04490 CRK36, cysteine-rich RLK (RECEPTOR-like protein kinase) 36 0.828 0.819
85 254818_at AT4G12470 AZI1, azelaic acid induced 1 0.828 0.550
86 252334_at AT3G48850 MPT2, mitochondrial phosphate transporter 2, PHT3;2, phosphate transporter 3;2 0.817 0.295
87 249459_at AT5G39580 [Peroxidase superfamily protein] 0.814 1.027
88 254524_at AT4G20000 [VQ motif-containing protein] 0.813 0.789
89 259439_at AT1G01480 ACS2, 1-amino-cyclopropane-1-carboxylate synthase 2, AT-ACC2 0.808 0.080
90 257840_at AT3G25250 AGC2, AGC2-1, AGC2 kinase 1, AtOXI1, OXI1, oxidative signal-inducible1 0.808 0.245
91 246405_at AT1G57630 [Toll-Interleukin-Resistance (TIR) domain family protein] 0.787 1.018
92 257919_at AT3G23250 ATMYB15, MYB DOMAIN PROTEIN 15, ATY19, MYB15, myb domain protein 15 0.785 1.079
93 266078_at AT2G40670 ARR16, response regulator 16, RR16, response regulator 16 -0.706 -0.443
94 247878_at AT5G57760 unknown -0.513 -0.340
95 258434_at AT3G16770 ATEBP, ethylene-responsive element binding protein, EBP, ethylene-responsive element binding protein, ERF72, ETHYLENE RESPONSE FACTOR 72, RAP2.3, RELATED TO AP2 3 -0.398 -0.005
96 250928_at AT5G03280 ATEIN2, CKR1, CYTOKININ RESISTANT 1, EIN2, ETHYLENE INSENSITIVE 2, ERA3, ENHANCED RESPONSE TO ABA3, ORE2, ORESARA 2, ORE3, ORESARA 3, PIR2 -0.387 -0.102
97 260070_at AT1G73830 BEE3, BR enhanced expression 3 -0.359 -0.090
98 261487_at AT1G14340 [RNA-binding (RRM/RBD/RNP motifs) family protein] -0.346 -0.277
99 245748_at AT1G51140 AKS1, ABA-responsive kinase substrate 1, FBH3, FLOWERING BHLH 3 -0.320 -0.409
100 247780_at AT5G58770 AtcPT4, cPT4, cis-prenyltransferase 4 -0.317 0.765
101 247980_at AT5G56860 GATA21, GATA TRANSCRIPTION FACTOR 21, GNC, GATA, nitrate-inducible, carbon metabolism-involved -0.303 -0.005
102 258091_at AT3G14560 unknown -0.302 -0.047
103 249917_at AT5G22460 [alpha/beta-Hydrolases superfamily protein] -0.284 0.071
104 257547_at AT3G13000 unknown -0.281 -0.298
105 260494_at AT2G41820 PXC3, PXY/TDR-correlated 3 -0.280 -0.325
106 248443_at AT5G51310 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.279 -0.012
107 250265_at AT5G12900 unknown -0.270 -0.155
108 247439_at AT5G62670 AHA11, H(+)-ATPase 11, HA11, H(+)-ATPase 11 -0.267 -0.157
109 256603_at AT3G28270 unknown -0.258 0.207
110 264517_at AT1G10120 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.254 -0.228
111 258326_at AT3G22760 SOL1 -0.251 -0.038
112 250690_at AT5G06530 ABCG22, ATP-binding cassette G22, AtABCG22, Arabidopsis thaliana ATP-binding cassette G22 -0.250 -0.330
113 264310_at AT1G62030 [Cysteine/Histidine-rich C1 domain family protein] -0.249 -0.053
114 265405_at AT2G16750 [Protein kinase protein with adenine nucleotide alpha hydrolases-like domain] -0.248 -0.354
115 254574_at AT4G19430 unknown -0.247 0.795
116 249144_at AT5G43270 SPL2, squamosa promoter binding protein-like 2 -0.245 -0.256
117 266412_at AT2G38720 MAP65-5, microtubule-associated protein 65-5 -0.245 0.022
118 258925_at AT3G10420 SPD1, SEEDLING PLASTID DEVELOPMENT 1 -0.244 -0.064
119 257900_at AT3G28420 [Putative membrane lipoprotein] -0.240 0.090
120 248028_at AT5G55620 unknown -0.235 -0.026
121 245492_at AT4G16340 SPK1, SPIKE1 -0.235 -0.204
122 261016_at AT1G26560 BGLU40, beta glucosidase 40 -0.233 0.187
123 246403_at AT1G57590 [Pectinacetylesterase family protein] -0.231 -0.014
124 245319_at AT4G16146 [cAMP-regulated phosphoprotein 19-related protein] -0.229 0.015
125 255088_at AT4G09350 CRRJ, CHLORORESPIRATORY REDUCTION J, DJC75, DNA J protein C75, NdhT, NADH dehydrogenase-like complex T -0.229 0.092
126 259994_at AT1G68130 AtIDD14, indeterminate(ID)-domain 14, IDD14, indeterminate(ID)-domain 14, IDD14alpha, IDD14beta -0.228 -0.109
127 253166_at AT4G35290 ATGLR3.2, ATGLUR2, GLR3.2, GLUTAMATE RECEPTOR 3.2, GLUR2, glutamate receptor 2 -0.227 -0.116
128 260693_at AT1G32450 AtNPF7.3, NPF7.3, NRT1/ PTR family 7.3, NRT1.5, nitrate transporter 1.5 -0.226 -0.211
129 256418_at AT3G06160 [AP2/B3-like transcriptional factor family protein] -0.222 -0.049
130 252482_at AT3G46670 UGT76E11, UDP-glucosyl transferase 76E11 -0.219 0.168
131 259132_at AT3G02250 [O-fucosyltransferase family protein] -0.216 -0.065
132 257474_at AT1G80850 [DNA glycosylase superfamily protein] -0.216 -0.071
133 263677_at AT1G04520 PDLP2, plasmodesmata-located protein 2 -0.216 -0.135
134 255488_at AT4G02630 [Protein kinase superfamily protein] -0.209 -0.382
135 251977_at AT3G53250 SAUR57, SMALL AUXIN UPREGULATED RNA 57 -0.209 -0.278
136 262196_at AT1G77870 MUB5, membrane-anchored ubiquitin-fold protein 5 precursor -0.209 -0.206
137 260770_at AT1G49200 [RING/U-box superfamily protein] -0.208 0.009
138 250107_at AT5G15330 ATSPX4, ARABIDOPSIS THALIANA SPX DOMAIN GENE 4, SPX4, SPX domain gene 4 -0.205 0.009
139 265097_at AT1G04020 ATBARD1, BARD1, breast cancer associated RING 1, ROW1 -0.204 -0.065
140 252023_at AT3G52920 unknown -0.200 -0.179
141 251688_at AT3G56480 [myosin heavy chain-related] -0.200 -0.200
142 266164_at AT2G28050 [Pentatricopeptide repeat (PPR) superfamily protein] -0.200 -0.088
143 251852_at AT3G54750 unknown -0.198 -0.131
144 249948_at AT5G19210 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.198 -0.345
145 254783_at AT4G12830 [alpha/beta-Hydrolases superfamily protein] -0.194 -0.145
146 247441_at AT5G62710 [Leucine-rich repeat protein kinase family protein] -0.192 -0.049
147 260669_at AT1G19340 [Methyltransferase MT-A70 family protein] -0.191 -0.301
148 266951_at AT2G18940 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.190 -0.157
149 258470_at AT3G06035 [Glycoprotein membrane precursor GPI-anchored] -0.188 -0.090
150 253533_at AT4G31590 ATCSLC05, CELLULOSE-SYNTHASE LIKE C5, ATCSLC5, Cellulose-synthase-like C5, CSLC05, CELLULOSE-SYNTHASE LIKE C5, CSLC5, Cellulose-synthase-like C5 -0.187 -0.219
151 252916_at AT4G38950 [ATP binding microtubule motor family protein] -0.186 -0.184
152 257395_at AT2G15630 [Pentatricopeptide repeat (PPR) superfamily protein] -0.184 -0.013
153 253650_at AT4G30020 [PA-domain containing subtilase family protein] -0.184 -0.351
154 250560_at AT5G08020 ATRPA70B, ARABIDOPSIS THALIANA RPA70-KDA SUBUNIT B, RPA70B, RPA70-kDa subunit B -0.183 -0.070
155 249472_at AT5G39210 CRR7, CHLORORESPIRATORY REDUCTION 7 -0.183 -0.147
156 263902_at AT2G36230 APG10, ALBINO AND PALE GREEN 10, HISN3 -0.182 -0.264
157 246288_at AT1G31850 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.182 -0.162
158 267264_at AT2G22970 SCPL11, serine carboxypeptidase-like 11 -0.180 -0.133
159 265939_at AT2G19650 [Cysteine/Histidine-rich C1 domain family protein] -0.179 0.123
160 254260_at AT4G23440 [Disease resistance protein (TIR-NBS class)] -0.178 -0.053
161 257024_at AT3G19100 [Protein kinase superfamily protein] -0.178 -0.041
162 262577_at AT1G15290 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.178 -0.058
163 247716_at AT5G59350 unknown -0.177 -0.289
164 251095_at AT5G01510 RUS5, ROOT UV-B SENSITIVE 5 -0.177 -0.036
165 257855_at AT3G13040 [myb-like HTH transcriptional regulator family protein] -0.177 -0.180
166 253065_at AT4G37740 AtGRF2, growth-regulating factor 2, GRF2, growth-regulating factor 2 -0.176 -0.181
167 265429_at AT2G20710 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.172 0.009
168 260527_at AT2G47270 UPB1, UPBEAT1 -0.171 -0.078
169 266302_at AT2G27050 AtEIL1, EIL1, ETHYLENE-INSENSITIVE3-like 1 -0.170 -0.233
170 263386_at AT2G40150 TBL28, TRICHOME BIREFRINGENCE-LIKE 28 -0.169 0.012
171 250284_at AT5G13290 CRN, CORYNE, SOL2, SUPPRESSOR OF LLP1 2 -0.169 -0.063
172 267462_at AT2G33735 [Chaperone DnaJ-domain superfamily protein] -0.169 0.006
173 267465_at AT2G19170 SLP3, subtilisin-like serine protease 3 -0.166 -0.259
174 260260_at AT1G68540 CCRL6, cinnamoyl coA reductase-like 6, TKPR2, tetraketide alpha-pyrone reductase 2 -0.166 -0.204
175 256822_at AT3G22190 IQD5, IQ-domain 5 -0.164 -0.134
176 252343_at AT3G48610 NPC6, non-specific phospholipase C6 -0.164 0.144
177 262181_at AT1G78060 [Glycosyl hydrolase family protein] -0.162 -0.168
178 266478_at AT2G31170 FIONA, FIONA, SYCO ARATH, cysteinyl t-RNA synthetase -0.161 0.042
179 265990_at AT2G24280 [alpha/beta-Hydrolases superfamily protein] -0.161 -0.008
180 265570_at AT2G28310 unknown -0.160 -0.213
181 257294_at AT3G15570 [Phototropic-responsive NPH3 family protein] -0.159 -0.334
182 255854_at AT1G67050 unknown -0.158 -0.261
183 246509_at AT5G16715 EMB2247, embryo defective 2247 -0.158 -0.040