4.0:Information of module
OE-HRA1 NS 
In comparison with 1 h Light IP RNA help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0019752 carboxylic acid metabolic process BP 2.074e-07
GO:0043436 oxoacid metabolic process BP 5.689e-07
GO:0006082 organic acid metabolic process BP 6.181e-07
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0048509 regulation of meristem development BP 8.454e-04
GO:0010075 regulation of meristem growth BP 9.599e-04
GO:0035266 meristem growth BP 1.177e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
OE-HRA1 NS 		 Log2 signal ratio
1 h Light IP RNA
1 258930_at AT3G10040 [sequence-specific DNA binding transcription factors] 1.091 -0.026
2 256243_at AT3G12500 ATHCHIB, basic chitinase, B-CHI, CHI-B, HCHIB, basic chitinase, PR-3, PATHOGENESIS-RELATED 3, PR3, PATHOGENESIS-RELATED 3 0.536 -0.105
3 245038_at AT2G26560 PLA IIA, PHOSPHOLIPASE A 2A, PLA2A, phospholipase A 2A, PLAII alpha, PLP2, PATATIN-LIKE PROTEIN 2, PLP2, PHOSPHOLIPASE A 2A 0.523 -0.466
4 254743_at AT4G13420 ATHAK5, ARABIDOPSIS THALIANA HIGH AFFINITY K+ TRANSPORTER 5, HAK5, high affinity K+ transporter 5 0.506 -0.030
5 255527_at AT4G02360 unknown 0.433 0.066
6 251428_at AT3G60140 BGLU30, BETA GLUCOSIDASE 30, DIN2, DARK INDUCIBLE 2, SRG2, SENESCENCE-RELATED GENE 2 0.410 -0.573
7 257382_at AT2G40750 ATWRKY54, WRKY DNA-BINDING PROTEIN 54, WRKY54, WRKY DNA-binding protein 54 0.327 0.024
8 249983_at AT5G18470 [Curculin-like (mannose-binding) lectin family protein] 0.324 -0.315
9 261956_at AT1G64590 [NAD(P)-binding Rossmann-fold superfamily protein] 0.323 -0.042
10 256073_at AT1G18100 E12A11, MFT, MOTHER OF FT AND TFL1 0.301 -0.035
11 257947_at AT3G21720 ICL, isocitrate lyase 0.255 -0.117
12 266511_at AT2G47680 [zinc finger (CCCH type) helicase family protein] 0.253 -0.062
13 247573_at AT5G61160 AACT1, anthocyanin 5-aromatic acyltransferase 1 0.251 -0.028
14 246831_at AT5G26340 ATSTP13, SUGAR TRANSPORT PROTEIN 13, MSS1, STP13, SUGAR TRANSPORT PROTEIN 13 0.235 -0.151
15 260335_at AT1G74000 SS3, strictosidine synthase 3 0.233 -0.059
16 245148_at AT2G45220 PME17, pectin methylesterase 17 0.228 -0.206
17 250942_at AT5G03350 [Legume lectin family protein] 0.217 0.065
18 248799_at AT5G47230 ATERF-5, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR- 5, ATERF5, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 5, AtMACD1, ERF102, ERF5, ethylene responsive element binding factor 5 0.216 -0.115
19 255285_at AT4G04630 unknown 0.207 -0.087
20 264716_at AT1G70170 MMP, matrix metalloproteinase 0.197 0.019
21 259445_at AT1G02400 ATGA2OX4, Arabidopsis thaliana gibberellin 2-oxidase 4, ATGA2OX6, ARABIDOPSIS THALIANA GIBBERELLIN 2-OXIDASE 6, DTA1, DOWNSTREAM TARGET OF AGL15 1, GA2OX6, gibberellin 2-oxidase 6 0.196 -0.290
22 261957_at AT1G64660 ATMGL, methionine gamma-lyase, MGL, methionine gamma-lyase 0.191 -0.192
23 251705_at AT3G56400 ATWRKY70, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 70, WRKY70, WRKY DNA-binding protein 70 0.189 -0.347
24 252377_at AT3G47960 AtNPF2.10, GTR1, GLUCOSINOLATE TRANSPORTER-1, NPF2.10, NRT1/ PTR family 2.10 0.184 -0.105
25 255812_at AT4G10310 ATHKT1, HKT1, high-affinity K+ transporter 1, HKT1;1 0.183 -0.082
26 248322_at AT5G52760 [Copper transport protein family] 0.179 -0.317
27 252400_at AT3G48020 unknown 0.165 -0.059
28 264494_at AT1G27461 unknown 0.164 -0.015
29 255943_at AT1G22370 AtUGT85A5, UDP-glucosyl transferase 85A5, UGT85A5, UDP-glucosyl transferase 85A5 0.159 -0.173
30 258868_at AT3G03110 CRM1B, XPO1B, exportin 1B 0.159 -0.060
31 258257_at AT3G26770 [NAD(P)-binding Rossmann-fold superfamily protein] 0.158 -0.117
32 250648_at AT5G06760 AtLEA4-5, Late Embryogenesis Abundant 4-5, LEA4-5, Late Embryogenesis Abundant 4-5 0.157 -0.066
33 246943_at AT5G25440 [Protein kinase superfamily protein] 0.156 -0.167
34 262092_at AT1G56150 SAUR71, SMALL AUXIN UPREGULATED 71 0.150 0.127
35 265991_at AT2G24120 PDE319, PIGMENT DEFECTIVE 319, SCA3, SCABRA 3 0.144 0.012
36 250605_at AT5G07570 [glycine/proline-rich protein] 0.142 0.055
37 265853_at AT2G42360 [RING/U-box superfamily protein] 0.142 -0.108
38 246993_at AT5G67450 AZF1, zinc-finger protein 1, ZF1, zinc-finger protein 1 0.141 -0.278
39 262549_at AT1G31290 AGO3, ARGONAUTE 3 0.140 -0.087
40 252834_at AT4G40070 [RING/U-box superfamily protein] 0.138 -0.016
41 253776_at AT4G28390 AAC3, ADP/ATP carrier 3, ATAAC3 0.137 0.021
42 258436_at AT3G16720 ATL2, TOXICOS EN LEVADURA 2, TL2, TOXICOS EN LEVADURA 2 0.133 -0.199
43 253494_at AT4G31830 unknown 0.130 0.019
44 257623_at AT3G26210 CYP71B23, cytochrome P450, family 71, subfamily B, polypeptide 23 0.127 -0.251
45 255385_at AT4G03610 [Metallo-hydrolase/oxidoreductase superfamily protein] 0.126 -0.015
46 254853_at AT4G12080 AHL1, AT-hook motif nuclear-localized protein 1, ATAHL1 0.122 -0.095
47 248686_at AT5G48540 [receptor-like protein kinase-related family protein] 0.122 -0.105
48 264866_at AT1G24140 [Matrixin family protein] 0.119 -0.038
49 251743_at AT3G55890 [Yippee family putative zinc-binding protein] 0.118 -0.113
50 245976_at AT5G13080 ATWRKY75, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 75, WRKY75, WRKY DNA-binding protein 75 0.117 -0.261
51 263962_at AT2G36350 [Protein kinase superfamily protein] 0.117 -0.040
52 262349_at AT2G48130 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.116 -0.026
53 253416_at AT4G33070 AtPDC1, PDC1, pyruvate decarboxylase 1 -0.573 -0.066
54 267265_at AT2G22980 SCPL13, serine carboxypeptidase-like 13 -0.446 0.054
55 263558_at AT2G16380 [Sec14p-like phosphatidylinositol transfer family protein] -0.377 0.006
56 263668_at AT1G04350 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.325 0.115
57 262412_at AT1G34760 GF14 OMICRON, GRF11, general regulatory factor 11, RHS5, ROOT HAIR SPECIFIC 5 -0.310 -0.008
58 265025_at AT1G24575 unknown -0.302 -0.001
59 257517_at AT3G16330 unknown -0.299 -0.006
60 264898_at AT1G23205 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.257 0.199
61 259655_at AT1G55210 [Disease resistance-responsive (dirigent-like protein) family protein] -0.251 0.092
62 258487_at AT3G02550 LBD41, LOB domain-containing protein 41 -0.248 -0.334
63 246310_at AT3G51895 AST12, SULTR3;1, sulfate transporter 3;1 -0.239 -0.050
64 255149_at AT4G08150 BP, BREVIPEDICELLUS, BP1, BREVIPEDICELLUS 1, KNAT1, KNOTTED-like from Arabidopsis thaliana -0.226 0.108
65 265121_at AT1G62560 FMO GS-OX3, flavin-monooxygenase glucosinolate S-oxygenase 3 -0.218 0.122
66 258252_at AT3G15720 [Pectin lyase-like superfamily protein] -0.207 0.420
67 253514_at AT4G31805 POLAR, POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION -0.200 -0.025
68 249790_at AT5G24290 MEB2, MEMBRANE OF ER BODY 2 -0.195 -0.036
69 262879_at AT1G64860 RPOD1, SIG1, RNA POLYMERASE SIGMA SUBUNIT 1, SIG2, RNApolymerase sigma subunit 2, SIGA, sigma factor A, SIGB -0.181 0.037
70 258003_at AT3G29030 ATEXP5, ARABIDOPSIS THALIANA EXPANSIN 5, ATEXPA5, ARABIDOPSIS THALIANA EXPANSIN A5, ATHEXP ALPHA 1.4, EXP5, EXPANSIN 5, EXPA5, expansin A5 -0.179 0.258
71 262286_at AT1G68585 unknown -0.176 0.083
72 263067_at AT2G17550 TRM26, TON1 Recruiting Motif 26 -0.176 -0.145
73 249762_at AT5G24000 unknown -0.174 0.013
74 259952_at AT1G71400 AtRLP12, receptor like protein 12, RLP12, receptor like protein 12 -0.173 -0.032
75 258497_at AT3G02380 ATCOL2, CONSTANS-LIKE 2, BBX3, B-box domain protein 3, COL2, CONSTANS-like 2 -0.163 0.166
76 257153_at AT3G27220 [Galactose oxidase/kelch repeat superfamily protein] -0.162 0.003
77 256057_at AT1G07180 ATNDI1, ARABIDOPSIS THALIANA INTERNAL NON-PHOSPHORYLATING NAD ( P ) H DEHYDROGENASE, NDA1, alternative NAD(P)H dehydrogenase 1 -0.160 0.014
78 252958_at AT4G38620 ATMYB4, myb domain protein 4, MYB4, myb domain protein 4 -0.150 0.013
79 254862_at AT4G12030 BASS5, BILE ACID:SODIUM SYMPORTER FAMILY PROTEIN 5, BAT5, bile acid transporter 5 -0.150 0.074
80 248186_at AT5G53880 unknown -0.149 0.036
81 260373_at AT1G73970 unknown -0.148 0.101
82 250255_at AT5G13730 SIG4, sigma factor 4, SIGD -0.144 -0.142
83 266322_at AT2G46690 SAUR32, SMALL AUXIN UPREGULATED RNA 32 -0.144 0.074
84 263150_at AT1G54050 [HSP20-like chaperones superfamily protein] -0.139 -0.176
85 267359_at AT2G40020 [Nucleolar histone methyltransferase-related protein] -0.138 0.036
86 258021_at AT3G19380 PUB25, plant U-box 25 -0.136 0.032
87 258559_at AT3G06010 ATCHR12, CHR12, chromatin remodeling 12 -0.135 -0.017
88 265667_at AT2G27470 NF-YB11, nuclear factor Y, subunit B11 -0.135 0.043
89 263297_at AT2G15310 ARFB1A, ADP-ribosylation factor B1A, ATARFB1A, ADP-ribosylation factor B1A -0.135 0.002
90 254174_at AT4G24120 ATYSL1, YELLOW STRIPE LIKE 1, YSL1, YELLOW STRIPE like 1 -0.132 0.005
91 260143_at AT1G71880 ATSUC1, ARABIDOPSIS THALIANA SUCROSE-PROTON SYMPORTER 1, SUC1, sucrose-proton symporter 1 -0.131 -0.080
92 249332_at AT5G40980 unknown -0.130 0.099
93 254434_at AT4G20880 [ethylene-responsive nuclear protein / ethylene-regulated nuclear protein (ERT2)] -0.129 0.052
94 263120_at AT1G78490 CYP708A3, cytochrome P450, family 708, subfamily A, polypeptide 3 -0.128 -0.018
95 249955_at AT5G18840 [Major facilitator superfamily protein] -0.128 -0.021
96 245174_at AT2G47500 [P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain] -0.126 -0.025
97 254251_at AT4G23300 CRK22, cysteine-rich RLK (RECEPTOR-like protein kinase) 22 -0.125 0.166
98 262388_at AT1G49320 unknown -0.125 -0.109
99 262945_at AT1G79510 [Uncharacterized conserved protein (DUF2358)] -0.125 -0.013
100 263809_at AT2G04570 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.124 0.043
101 267488_at AT2G19110 ATHMA4, ARABIDOPSIS HEAVY METAL ATPASE 4, HMA4, heavy metal atpase 4 -0.122 -0.154
102 249384_at AT5G39890 unknown -0.119 -0.072
103 260389_at AT1G74055 unknown -0.119 0.048