4.0:Information of module
Elevated CO2 AMPLE N NIGHT
In comparison with calcicole ecotype Cal-0 help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006955 immune response BP 9.307e-57
GO:0045087 innate immune response BP 9.307e-57
GO:0098542 defense response to other organism BP 5.301e-55
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0016556 mRNA modification BP 8.945e-10
GO:0006732 coenzyme metabolic process BP 6.314e-09
GO:0051186 cofactor metabolic process BP 1.805e-08
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Elevated CO2 AMPLE N NIGHT		 Log2 signal ratio
calcicole ecotype Cal-0
1 256012_at AT1G19250 FMO1, flavin-dependent monooxygenase 1 0.723 0.385
2 266385_at AT2G14610 ATPR1, PATHOGENESIS-RELATED GENE 1, PR 1, PATHOGENESIS-RELATED GENE 1, PR1, pathogenesis-related gene 1 0.634 0.218
3 258277_at AT3G26830 CYP71B15, PAD3, PHYTOALEXIN DEFICIENT 3 0.617 0.465
4 264648_at AT1G09080 BIP3, binding protein 3 0.607 0.280
5 264400_at AT1G61800 ATGPT2, ARABIDOPSIS GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, GPT2, glucose-6-phosphate/phosphate translocator 2 0.561 -0.321
6 249481_at AT5G38900 [Thioredoxin superfamily protein] 0.546 0.282
7 255340_at AT4G04490 CRK36, cysteine-rich RLK (RECEPTOR-like protein kinase) 36 0.534 0.046
8 246368_at AT1G51890 [Leucine-rich repeat protein kinase family protein] 0.533 0.322
9 249896_at AT5G22530 unknown 0.531 -0.007
10 261021_at AT1G26380 [FAD-binding Berberine family protein] 0.528 0.143
11 267567_at AT2G30770 CYP71A13, cytochrome P450, family 71, subfamily A, polypeptide 13 0.514 0.320
12 260116_at AT1G33960 AIG1, AVRRPT2-INDUCED GENE 1 0.505 0.700
13 256252_at AT3G11340 UGT76B1, UDP-dependent glycosyltransferase 76B1 0.498 0.293
14 261763_at AT1G15520 ABCG40, ATP-binding cassette G40, ATABCG40, Arabidopsis thaliana ATP-binding cassette G40, ATPDR12, PLEIOTROPIC DRUG RESISTANCE 12, PDR12, pleiotropic drug resistance 12 0.484 0.233
15 252681_at AT3G44350 anac061, NAC domain containing protein 61, NAC061, NAC domain containing protein 61 0.484 0.140
16 262731_at AT1G16420 ATMC8, ARABIDOPSIS THALIANA METACASPASE 8, AtMCP2e, metacaspase 2e, MC8, metacaspase 8, MCP2e, metacaspase 2e 0.481 0.059
17 251884_at AT3G54150 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.480 0.185
18 266267_at AT2G29460 ATGSTU4, glutathione S-transferase tau 4, GST22, GLUTATHIONE S-TRANSFERASE 22, GSTU4, glutathione S-transferase tau 4 0.471 0.465
19 261005_at AT1G26420 [FAD-binding Berberine family protein] 0.470 0.333
20 260225_at AT1G74590 ATGSTU10, GLUTATHIONE S-TRANSFERASE TAU 10, GSTU10, glutathione S-transferase TAU 10 0.468 0.428
21 255630_at AT4G00700 [C2 calcium/lipid-binding plant phosphoribosyltransferase family protein] 0.447 0.280
22 259410_at AT1G13340 [Regulator of Vps4 activity in the MVB pathway protein] 0.444 0.313
23 258203_at AT3G13950 unknown 0.440 0.339
24 258941_at AT3G09940 ATMDAR3, ARABIDOPSIS THALIANA MONODEHYDROASCORBATE REDUCTASE 3, MDAR2, MONODEHYDROASCORBATE REDUCTASE 2, MDAR3, MONODEHYDROASCORBATE REDUCTASE 3, MDHAR, monodehydroascorbate reductase 0.440 0.228
25 250983_at AT5G02780 GSTL1, glutathione transferase lambda 1 0.419 0.324
26 246401_at AT1G57560 AtMYB50, myb domain protein 50, MYB50, myb domain protein 50 0.411 -0.078
27 247293_at AT5G64510 TIN1, tunicamycin induced 1 0.403 -0.074
28 260568_at AT2G43570 CHI, chitinase, putative 0.402 0.233
29 262930_at AT1G65690 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] 0.393 0.171
30 258100_at AT3G23550 [MATE efflux family protein] 0.384 0.043
31 261216_at AT1G33030 [O-methyltransferase family protein] 0.367 0.139
32 257591_at AT3G24900 AtRLP39, receptor like protein 39, RLP39, receptor like protein 39 0.355 -0.051
33 252921_at AT4G39030 EDS5, ENHANCED DISEASE SUSCEPTIBILITY 5, SCORD3, susceptible to coronatine-deficient Pst DC3000 3, SID1, SALICYLIC ACID INDUCTION DEFICIENT 1 0.353 0.095
34 252417_at AT3G47480 [Calcium-binding EF-hand family protein] 0.349 0.329
35 254660_at AT4G18250 [receptor serine/threonine kinase, putative] 0.346 0.306
36 253181_at AT4G35180 LHT7, LYS/HIS transporter 7 0.345 0.270
37 246302_at AT3G51860 ATCAX3, ATHCX1, CAX1-LIKE, CAX3, cation exchanger 3 0.343 0.028
38 256526_at AT1G66090 [Disease resistance protein (TIR-NBS class)] 0.340 0.120
39 266292_at AT2G29350 SAG13, senescence-associated gene 13 0.334 0.471
40 251970_at AT3G53150 UGT73D1, UDP-glucosyl transferase 73D1 0.331 0.222
41 252309_at AT3G49340 [Cysteine proteinases superfamily protein] 0.329 0.016
42 255110_at AT4G08770 Prx37, peroxidase 37 0.327 0.182
43 258984_at AT3G08970 ATERDJ3A, TMS1, THERMOSENSITIVE MALE STERILE 1 0.315 -0.004
44 260783_at AT1G06160 ORA59, octadecanoid-responsive Arabidopsis AP2/ERF 59 0.311 0.033
45 254794_at AT4G12970 EPFL9, STOMAGEN, STOMAGEN -0.238 -0.012
46 248921_at AT5G45950 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.209 -0.128
47 256418_at AT3G06160 [AP2/B3-like transcriptional factor family protein] -0.206 -0.035
48 250408_at AT5G10930 CIPK5, CBL-interacting protein kinase 5, SnRK3.24, SNF1-RELATED PROTEIN KINASE 3.24 -0.203 -0.055
49 249383_at AT5G39860 BHLH136, BASIC HELIX-LOOP-HELIX PROTEIN 136, BNQ1, BANQUO 1, PRE1, PACLOBUTRAZOL RESISTANCE1 -0.201 -0.087
50 248860_at AT5G46670 [Cysteine/Histidine-rich C1 domain family protein] -0.179 -0.017
51 262464_at AT1G50280 [Phototropic-responsive NPH3 family protein] -0.171 -0.041
52 263883_at AT2G21830 [Cysteine/Histidine-rich C1 domain family protein] -0.167 -0.027
53 247362_at AT5G63140 ATPAP29, purple acid phosphatase 29, PAP29, PAP29, purple acid phosphatase 29 -0.161 -0.178
54 266061_at AT2G18720 [Translation elongation factor EF1A/initiation factor IF2gamma family protein] -0.158 -0.000
55 254430_at AT4G20820 [FAD-binding Berberine family protein] -0.158 -0.170
56 261593_at AT1G33170 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.157 -0.014
57 256644_at AT3G32300 [pseudogene] -0.156 -0.018
58 258702_at AT3G09730 unknown -0.154 -0.093
59 250968_at AT5G02890 [HXXXD-type acyl-transferase family protein] -0.154 -0.070
60 250583_at AT5G07500 AtTZF6, PEI1, TZF6, Tandem CCCH Zinc Finger protein 6 -0.153 0.017
61 251141_at AT5G01075 [Glycosyl hydrolase family 35 protein] -0.150 -0.155
62 260081_at AT1G78170 unknown -0.150 -0.221
63 246810_at AT5G27160 unknown -0.146 0.001
64 258030_at AT3G27590 unknown -0.146 -0.036
65 259857_at AT1G68430 unknown -0.144 -0.057
66 256734_at AT3G29390 RIK, RS2-interacting KH protein -0.144 -0.399
67 249410_at AT5G40380 CRK42, cysteine-rich RLK (RECEPTOR-like protein kinase) 42 -0.143 0.087
68 261251_at AT1G05920 [FUNCTIONS IN: DNA binding] -0.142 -0.010
69 263677_at AT1G04520 PDLP2, plasmodesmata-located protein 2 -0.142 -0.013
70 262830_at AT1G14700 ATPAP3, PAP3, purple acid phosphatase 3 -0.141 0.085
71 263121_at AT1G78530 [Protein kinase superfamily protein] -0.140 -0.039
72 261914_at AT1G65870 [Disease resistance-responsive (dirigent-like protein) family protein] -0.140 -0.210
73 245349_at AT4G16690 ATMES16, ARABIDOPSIS THALIANA METHYL ESTERASE 16, MES16, methyl esterase 16 -0.139 -0.030
74 256602_at AT3G28310 unknown -0.139 -0.071
75 254235_at AT4G23750 CRF2, cytokinin response factor 2, TMO3, TARGET OF MONOPTEROS 3 -0.138 -0.087
76 252268_at AT3G49650 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.137 -0.014
77 259275_at AT3G01060 unknown -0.136 -0.025
78 249649_at AT5G37060 ATCHX24, ARABIDOPSIS THALIANA CATION/H+ EXCHANGER 24, CHX24, cation/H+ exchanger 24 -0.135 -0.028
79 250891_at AT5G04530 KCS19, 3-ketoacyl-CoA synthase 19 -0.134 -0.089
80 249546_at AT5G38150 PMI15, plastid movement impaired 15 -0.134 0.277
81 251502_at AT3G59130 [Cysteine/Histidine-rich C1 domain family protein] -0.133 -0.033
82 259149_at AT3G10340 PAL4, phenylalanine ammonia-lyase 4 -0.132 -0.061
83 261196_at AT1G12860 ICE2, INDUCER OF CBF EXPRESSION 2, SCRM2, SCREAM 2 -0.131 -0.082
84 258725_at AT3G09620 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.130 -0.006
85 256966_at AT3G13400 sks13, SKU5 similar 13 -0.130 -0.048
86 254582_at AT4G19470 [Leucine-rich repeat (LRR) family protein] -0.130 0.013
87 266279_at AT2G29290 [NAD(P)-binding Rossmann-fold superfamily protein] -0.126 0.009