4.0:Information of module
Ambient CO2 LIMITING N NIGHT
In comparison with siliques AtHb1 control help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0031667 response to nutrient levels BP 2.377e-07
GO:0009991 response to extracellular stimulus BP 7.641e-07
GO:0031669 cellular response to nutrient levels BP 2.632e-06
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0001510 RNA methylation BP 1.110e-10
GO:0006221 pyrimidine nucleotide biosynthetic proce... BP 3.527e-10
GO:0006220 pyrimidine nucleotide metabolic process BP 4.111e-10
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Ambient CO2 LIMITING N NIGHT		 Log2 signal ratio
siliques AtHb1 control
1 262232_at AT1G68600 [Aluminium activated malate transporter family protein] 0.390 0.135
2 247212_at AT5G65040 unknown 0.250 0.015
3 248961_at AT5G45650 [subtilase family protein] 0.224 -0.067
4 267361_at AT2G39920 [HAD superfamily, subfamily IIIB acid phosphatase ] 0.212 -0.077
5 254572_at AT4G19380 [Long-chain fatty alcohol dehydrogenase family protein] 0.209 0.180
6 250248_at AT5G13740 ZIF1, zinc induced facilitator 1 0.189 0.028
7 248970_at AT5G45380 ATDUR3, DUR3, DEGRADATION OF UREA 3 0.180 -0.057
8 264809_at AT1G08830 CSD1, copper/zinc superoxide dismutase 1 0.179 -0.034
9 258207_at AT3G14050 AT-RSH2, RELA-SPOT HOMOLOG 2, ATRSH2, RELA/SPOT HOMOLOG 2, RSH2, RELA/SPOT homolog 2 0.176 0.045
10 266165_at AT2G28190 CSD2, copper/zinc superoxide dismutase 2, CZSOD2, COPPER/ZINC SUPEROXIDE DISMUTASE 2 0.175 0.006
11 258560_at AT3G06020 FAF4, FANTASTIC FOUR 4 0.175 -0.024
12 248270_at AT5G53450 ORG1, OBP3-responsive gene 1 0.165 0.048
13 255377_at AT4G03500 [Ankyrin repeat family protein] 0.163 0.010
14 262868_at AT1G64980 CDI, cadmium 2+ induced 0.157 -0.127
15 258971_at AT3G01990 ACR6, ACT domain repeat 6 0.157 0.024
16 251472_at AT3G59580 NLP9, NIN-like protein 9 0.155 0.084
17 252888_at AT4G39210 APL3 0.152 -0.160
18 253358_at AT4G32940 GAMMA-VPE, gamma vacuolar processing enzyme, GAMMAVPE 0.150 -0.040
19 265327_at AT2G18210 unknown 0.150 -0.069
20 263237_at AT1G10610 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.148 0.060
21 252427_at AT3G47640 PYE, POPEYE 0.147 0.132
22 257062_at AT3G18290 BTS, BRUTUS, EMB2454, embryo defective 2454 0.144 0.036
23 258293_at AT3G23430 ATPHO1, ARABIDOPSIS PHOSPHATE 1, PHO1, phosphate 1 0.144 -0.039
24 264751_at AT1G23020 ATFRO3, FERRIC REDUCTION OXIDASE 3, FRO3, ferric reduction oxidase 3 0.144 0.303
25 250344_at AT5G11930 [Thioredoxin superfamily protein] 0.144 -0.178
26 265414_at AT2G16660 [Major facilitator superfamily protein] 0.142 -0.096
27 260627_at AT1G62310 [transcription factor jumonji (jmjC) domain-containing protein] 0.139 -0.011
28 250828_at AT5G05250 unknown 0.133 0.358
29 263985_at AT2G42750 DJC77, DNA J protein C77 0.132 0.030
30 245275_at AT4G15210 AT-BETA-AMY, ATBETA-AMY, ARABIDOPSIS THALIANA BETA-AMYLASE, BAM5, beta-amylase 5, BMY1, RAM1, REDUCED BETA AMYLASE 1 -0.579 -0.085
31 259015_at AT3G07350 unknown -0.437 0.110
32 261927_at AT1G22500 AtATL15, Arabidopsis thaliana Arabidopsis toxicos en levadura 15, ATL15, Arabidopsis toxicos en levadura 15 -0.327 0.027
33 265922_at AT2G18480 [Major facilitator superfamily protein] -0.327 0.084
34 245912_at AT5G19600 SULTR3;5, sulfate transporter 3;5 -0.282 -0.039
35 246854_at AT5G26200 [Mitochondrial substrate carrier family protein] -0.282 0.016
36 247109_at AT5G65870 ATPSK5, phytosulfokine 5 precursor, PSK5, PSK5, phytosulfokine 5 precursor -0.263 -0.034
37 248377_at AT5G51720 At-NEET, NEET, NEET group protein -0.251 -0.143
38 260357_at AT1G69260 AFP1, ABI five binding protein -0.240 0.310
39 251109_at AT5G01600 ATFER1, ARABIDOPSIS THALIANA FERRETIN 1, FER1, ferretin 1 -0.236 -0.053
40 262254_at AT1G53920 GLIP5, GDSL-motif lipase 5 -0.233 -0.057
41 263831_at AT2G40300 ATFER4, ferritin 4, FER4, ferritin 4 -0.229 -0.107
42 253043_at AT4G37540 LBD39, LOB domain-containing protein 39 -0.222 -0.034
43 255142_at AT4G08390 SAPX, stromal ascorbate peroxidase -0.212 -0.122
44 252698_at AT3G43670 [Copper amine oxidase family protein] -0.210 -0.105
45 255723_at AT3G29575 AFP3, ABI five binding protein 3 -0.204 0.129
46 259723_at AT1G60960 ATIRT3, IRON REGULATED TRANSPORTER 3, IRT3, iron regulated transporter 3 -0.202 0.023
47 250580_at AT5G07440 GDH2, glutamate dehydrogenase 2 -0.191 0.071
48 249923_at AT5G19120 [Eukaryotic aspartyl protease family protein] -0.183 0.301
49 264246_at AT1G60140 ATTPS10, trehalose phosphate synthase, TPS10, trehalose phosphate synthase, TPS10, TREHALOSE PHOSPHATE SYNTHASE 10 -0.181 0.152
50 253317_at AT4G33960 unknown -0.176 0.110
51 267080_at AT2G41190 [Transmembrane amino acid transporter family protein] -0.175 0.060
52 250565_at AT5G08000 E13L3, glucan endo-1,3-beta-glucosidase-like protein 3, PDCB2, PLASMODESMATA CALLOSE-BINDING PROTEIN 2 -0.174 -0.025
53 256818_at AT3G21420 LBO1, LATERAL BRANCHING OXIDOREDUCTASE 1 -0.174 -0.258
54 247734_at AT5G59400 unknown -0.171 -0.052
55 253011_at AT4G37890 EDA40, embryo sac development arrest 40 -0.169 0.038
56 246002_at AT5G20740 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.166 -0.194
57 252220_at AT3G49940 LBD38, LOB domain-containing protein 38 -0.165 -0.016