4.0:Information of module
Ambient CO2 LIMITING N DAY
In comparison with Col0-PsmES4326-24hpi help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0000338 protein deneddylation BP 5.322e-04
GO:0010388 cullin deneddylation BP 5.322e-04
GO:0006099 tricarboxylic acid cycle BP 6.193e-04
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010264 myo-inositol hexakisphosphate biosynthet... BP 2.986e-05
GO:0032958 inositol phosphate biosynthetic process BP 2.986e-05
GO:0033517 myo-inositol hexakisphosphate metabolic ... BP 2.986e-05
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Ambient CO2 LIMITING N DAY		 Log2 signal ratio
Col0-PsmES4326-24hpi
1 265414_at AT2G16660 [Major facilitator superfamily protein] 0.382 0.069
2 267361_at AT2G39920 [HAD superfamily, subfamily IIIB acid phosphatase ] 0.306 -0.398
3 261375_at AT1G53160 FTM6, FLORAL TRANSITION AT THE MERISTEM6, SPL4, squamosa promoter binding protein-like 4 0.241 -0.686
4 262232_at AT1G68600 [Aluminium activated malate transporter family protein] 0.236 0.060
5 246238_at AT4G36670 AtPLT6, AtPMT6, PLT6, polyol transporter 6, PMT6, polyol/monosaccharide transporter 6 0.173 0.193
6 250344_at AT5G11930 [Thioredoxin superfamily protein] 0.172 -0.209
7 263480_at AT2G04032 ZIP7, zinc transporter 7 precursor 0.170 -0.295
8 255726_at AT1G25530 [Transmembrane amino acid transporter family protein] 0.168 0.006
9 249791_at AT5G23810 AAP7, amino acid permease 7 0.166 0.091
10 245879_at AT5G09420 AtmtOM64, ATTOC64-V, translocon at the outer membrane of chloroplasts 64-V, MTOM64, ARABIDOPSIS THALIANA TRANSLOCON AT THE OUTER MEMBRANE OF CHLOROPLASTS 64-V, OM64, outer membrane 64, TOC64-V, translocon at the outer membrane of chloroplasts 64-V 0.156 0.190
11 247240_at AT5G64660 ATCMPG2, CMPG2, CYS, MET, PRO, and GLY protein 2 0.151 0.527
12 253322_at AT4G33980 unknown 0.147 0.216
13 251598_at AT3G57600 [Integrase-type DNA-binding superfamily protein] 0.146 -0.103
14 254546_at AT4G19850 ATPP2-A2, ARABIDOPSIS THALIANA PHLOEM PROTEIN 2-A2, PP2-A2, phloem protein 2-A2, PP2A2 0.145 0.274
15 250437_at AT5G10430 AGP4, arabinogalactan protein 4, ATAGP4 0.140 -0.255
16 265557_at AT2G05640 [pseudogene] 0.137 0.056
17 257399_at AT1G23690 unknown 0.135 -0.029
18 253215_at AT4G34950 [Major facilitator superfamily protein] 0.134 -0.415
19 246755_at AT5G27920 [F-box family protein] 0.127 0.071
20 255941_at AT1G20350 ATTIM17-1, translocase inner membrane subunit 17-1, TIM17-1, translocase inner membrane subunit 17-1 0.126 0.274
21 259726_at AT1G60985 SCRL6, SCR-like 6 0.126 0.061
22 246247_at AT4G36640 [Sec14p-like phosphatidylinositol transfer family protein] 0.125 0.333
23 262694_at AT1G62790 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.125 0.068
24 258377_at AT3G17690 ATCNGC19, CYCLIC NUCLEOTIDE-GATED CHANNEL 19, CNGC19, cyclic nucleotide gated channel 19 0.124 0.824
25 265329_at AT2G18450 SDH1-2, succinate dehydrogenase 1-2 0.123 0.122
26 246987_at AT5G67300 ATMYB44, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 44, ATMYBR1, MYB44, MYBR1, myb domain protein r1 0.123 0.315
27 250045_at AT5G17700 [MATE efflux family protein] 0.123 -0.156
28 247799_at AT5G58840 [Subtilase family protein] 0.123 0.820
29 256083_at AT1G20735 [F-box and associated interaction domains-containing protein] 0.119 -0.013
30 254492_at AT4G20260 ATPCAP1, ARABIDOPSIS THALIANA PLASMA-MEMBRANE ASSOCIATED CATION-BINDING PROTEIN 1, MDP25, microtubule-destabilizing protein 25, PCAP1, plasma-membrane associated cation-binding protein 1 0.118 0.184
31 252766_at AT3G42820 [similar to Ulp1 protease family protein [Arabidopsis thaliana] (TAIR:AT1G35770.1)] 0.118 0.104
32 267548_at AT2G32660 AtRLP22, receptor like protein 22, RLP22, receptor like protein 22 0.117 0.402
33 264693_at AT1G69970 CLE26, CLAVATA3/ESR-RELATED 26 0.115 -0.044
34 259388_at AT1G13420 ATST4B, ARABIDOPSIS THALIANA SULFOTRANSFERASE 4B, ST4B, sulfotransferase 4B 0.113 0.089
35 251933_at AT3G54060 unknown 0.113 -0.068
36 256306_at AT1G30370 DLAH, DAD1-like acylhydrolase 0.111 0.552
37 247429_at AT5G62620 [Galactosyltransferase family protein] 0.108 0.257
38 266674_at AT2G29620 unknown 0.108 0.150
39 258321_at AT3G22840 ELIP, ELIP1, EARLY LIGHT-INDUCABLE PROTEIN 0.106 0.148
40 252652_at AT3G44720 ADT4, arogenate dehydratase 4 0.105 0.438
41 259487_at AT1G15720 TRFL5, TRF-like 5 0.105 -0.071
42 258299_at AT3G23410 ATFAO3, ARABIDOPSIS FATTY ALCOHOL OXIDASE 3, FAO3, fatty alcohol oxidase 3 0.104 -0.023
43 254457_at AT4G21170 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.102 -0.054
44 254543_at AT4G19810 ChiC, class V chitinase 0.102 0.742
45 257726_at AT3G18360 [VQ motif-containing protein] 0.101 -0.081
46 265665_at AT2G27420 [Cysteine proteinases superfamily protein] -0.295 -1.178
47 265922_at AT2G18480 [Major facilitator superfamily protein] -0.280 0.086
48 249532_at AT5G38780 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.271 0.781
49 259432_at AT1G01520 ASG4, ALTERED SEED GERMINATION 4 -0.271 -0.217
50 255812_at AT4G10310 ATHKT1, HKT1, high-affinity K+ transporter 1, HKT1;1 -0.266 -0.058
51 262231_at AT1G68740 PHO1;H1 -0.237 0.162
52 265111_at AT1G62510 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.228 -0.845
53 245912_at AT5G19600 SULTR3;5, sulfate transporter 3;5 -0.227 0.079
54 257207_at AT3G14900 EMB3120, EMBRYO DEFECTIVE 3120 -0.194 -0.110
55 247800_at AT5G58570 unknown -0.190 0.275
56 254430_at AT4G20820 [FAD-binding Berberine family protein] -0.190 -0.109
57 249032_at AT5G44910 [Toll-Interleukin-Resistance (TIR) domain family protein] -0.186 0.093
58 247991_at AT5G56320 ATEXP14, ATEXPA14, expansin A14, ATHEXP ALPHA 1.5, EXP14, EXPANSIN 14, EXPA14, expansin A14 -0.179 0.048
59 257322_at ATMG01180 ORF111B -0.178 0.037
60 265116_at AT1G62480 [Vacuolar calcium-binding protein-related] -0.178 -0.012
61 250580_at AT5G07440 GDH2, glutamate dehydrogenase 2 -0.175 0.734
62 264604_at AT1G04650 unknown -0.172 0.044
63 246142_at AT5G19970 unknown -0.169 -0.204
64 249588_at AT5G37790 [Protein kinase superfamily protein] -0.161 -0.324
65 249977_at AT5G18820 Cpn60alpha2, chaperonin-60alpha2, EMB3007, embryo defective 3007 -0.161 -0.127
66 266278_at AT2G29300 [NAD(P)-binding Rossmann-fold superfamily protein] -0.159 -0.208
67 254710_at AT4G18050 ABCB9, ATP-binding cassette B9, PGP9, P-glycoprotein 9 -0.157 0.761
68 256284_at AT3G12530 PSF2 -0.155 -0.018
69 257334_at ATMG01370 ORF111D -0.141 -0.052
70 265766_at AT2G48080 [oxidoreductase, 2OG-Fe(II) oxygenase family protein] -0.141 0.062
71 248605_at AT5G49410 unknown -0.141 -0.093
72 247167_at AT5G65850 [F-box and associated interaction domains-containing protein] -0.140 0.015
73 259172_at AT3G03630 CS26, cysteine synthase 26 -0.140 -0.411
74 254226_at AT4G23690 AtDIR6, Arabidopsis thaliana dirigent protein 6, DIR6, dirigent protein 6 -0.133 0.040
75 251985_at AT3G53220 [Thioredoxin superfamily protein] -0.132 -0.145
76 266015_at AT2G24190 SDR2, short-chain dehydrogenase/reductase 2 -0.128 -0.166
77 253243_at AT4G34560 unknown -0.126 0.201
78 248315_at AT5G52630 MEF1, mitochondrial RNA editing factor 1 -0.125 0.025
79 256603_at AT3G28270 unknown -0.124 -0.293
80 255546_at AT4G01910 [Cysteine/Histidine-rich C1 domain family protein] -0.123 0.447
81 265573_at AT2G28200 [C2H2-type zinc finger family protein] -0.123 0.133
82 253175_at AT4G35050 MSI3, MULTICOPY SUPPRESSOR OF IRA1 3, NFC3, NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP C 3 -0.121 -0.095
83 256537_at AT1G33340 [ENTH/ANTH/VHS superfamily protein] -0.120 -0.328
84 258254_at AT3G26782 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.120 -0.102
85 264454_at AT1G10320 [Zinc finger C-x8-C-x5-C-x3-H type family protein] -0.119 0.237
86 263797_at AT2G24570 ATWRKY17, WRKY17, WRKY DNA-binding protein 17 -0.118 0.075
87 253776_at AT4G28390 AAC3, ADP/ATP carrier 3, ATAAC3 -0.118 0.327
88 255285_at AT4G04630 unknown -0.117 -0.324
89 264346_at AT1G12010 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.113 -0.251