4.0:Information of module
IRP1-OE-Fe--shoot
In comparison with WT roots - Fe help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0042221 response to chemical BP 8.582e-19
GO:1901698 response to nitrogen compound BP 1.876e-18
GO:1901700 response to oxygen-containing compound BP 2.609e-17
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0032774 RNA biosynthetic process BP 4.854e-10
GO:0006351 transcription, DNA-templated BP 7.627e-10
GO:0097659 nucleic acid-templated transcription BP 7.627e-10
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
IRP1-OE-Fe--shoot		 Log2 signal ratio
WT roots - Fe
1 253505_at AT4G31970 CYP82C2, cytochrome P450, family 82, subfamily C, polypeptide 2 1.398 0.818
2 261020_at AT1G26390 [FAD-binding Berberine family protein] 1.356 0.565
3 254889_at AT4G11650 ATOSM34, osmotin 34, OSM34, osmotin 34 1.353 0.347
4 263228_at AT1G30700 [FAD-binding Berberine family protein] 1.295 0.315
5 247333_at AT5G63600 ATFLS5, FLS5, flavonol synthase 5 1.242 0.082
6 254819_at AT4G12500 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 1.187 0.023
7 249101_at AT5G43580 UPI, UNUSUAL SERINE PROTEASE INHIBITOR 1.152 0.205
8 246519_at AT5G15780 [Pollen Ole e 1 allergen and extensin family protein] 1.124 -0.008
9 250798_at AT5G05340 PRX52, peroxidase 52 1.104 0.408
10 245148_at AT2G45220 PME17, pectin methylesterase 17 1.085 0.054
11 255110_at AT4G08770 Prx37, peroxidase 37 1.072 0.112
12 247297_at AT5G64100 [Peroxidase superfamily protein] 1.058 -0.019
13 254314_at AT4G22470 [protease inhibitor/seed storage/lipid transfer protein (LTP) family protein] 1.022 0.015
14 259120_at AT3G02240 GLV4, GOLVEN 4, RGF7, root meristem growth factor 7 1.013 0.188
15 267565_at AT2G30750 CYP71A12, cytochrome P450, family 71, subfamily A, polypeptide 12 0.999 0.434
16 245275_at AT4G15210 AT-BETA-AMY, ATBETA-AMY, ARABIDOPSIS THALIANA BETA-AMYLASE, BAM5, beta-amylase 5, BMY1, RAM1, REDUCED BETA AMYLASE 1 0.998 0.001
17 248703_at AT5G48430 [Eukaryotic aspartyl protease family protein] 0.975 0.080
18 264148_at AT1G02220 ANAC003, NAC domain containing protein 3, NAC003, NAC domain containing protein 3 0.972 0.286
19 264280_at AT1G61820 BGLU46, beta glucosidase 46 0.963 0.207
20 262930_at AT1G65690 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] 0.962 0.274
21 249045_at AT5G44380 [FAD-binding Berberine family protein] 0.960 0.057
22 246855_at AT5G26280 [TRAF-like family protein] 0.921 0.072
23 254215_at AT4G23700 ATCHX17, cation/H+ exchanger 17, CHX17, cation/H+ exchanger 17 0.917 0.042
24 267384_at AT2G44370 [Cysteine/Histidine-rich C1 domain family protein] 0.916 0.131
25 266292_at AT2G29350 SAG13, senescence-associated gene 13 0.912 -0.023
26 262482_at AT1G17020 ATSRG1, SENESCENCE-RELATED GENE 1, SRG1, senescence-related gene 1 0.910 0.027
27 259553_x_at AT1G21310 ATEXT3, extensin 3, EXT3, extensin 3, RSH, ROOT-SHOOT-HYPOCOTYL DEFECTIVE 0.909 0.016
28 251942_at AT3G53480 ABCG37, ATP-binding cassette G37, ATPDR9, PLEIOTROPIC DRUG RESISTANCE 9, PDR9, pleiotropic drug resistance 9, PIS1, polar auxin transport inhibitor sensitive 1 0.892 0.213
29 258809_at AT3G04070 anac047, NAC domain containing protein 47, NAC047, NAC domain containing protein 47 0.886 0.173
30 261006_at AT1G26410 [FAD-binding Berberine family protein] 0.885 0.169
31 257061_at AT3G18250 [Putative membrane lipoprotein] 0.882 0.369
32 267436_at AT2G19190 FRK1, FLG22-induced receptor-like kinase 1 0.879 0.035
33 264616_at AT2G17740 [Cysteine/Histidine-rich C1 domain family protein] 0.870 -0.003
34 263595_at AT2G01890 ATPAP8, PURPLE ACID PHOSPHATASE 8, PAP8, purple acid phosphatase 8 0.868 0.060
35 260225_at AT1G74590 ATGSTU10, GLUTATHIONE S-TRANSFERASE TAU 10, GSTU10, glutathione S-transferase TAU 10 0.867 0.359
36 251336_at AT3G61190 BAP1, BON association protein 1 0.845 0.400
37 259036_at AT3G09220 LAC7, laccase 7 0.841 0.058
38 266992_at AT2G39200 ATMLO12, MILDEW RESISTANCE LOCUS O 12, MLO12, MILDEW RESISTANCE LOCUS O 12 0.831 0.024
39 264960_at AT1G76930 ATEXT1, EXTENSIN 1, ATEXT4, extensin 4, EXT1, extensin 1, EXT4, extensin 4, ORG5, OBP3-RESPONSIVE GENE 5 0.827 0.125
40 245976_at AT5G13080 ATWRKY75, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 75, WRKY75, WRKY DNA-binding protein 75 0.827 0.572
41 260386_at AT1G74010 [Calcium-dependent phosphotriesterase superfamily protein] 0.816 0.046
42 260203_at AT1G52890 ANAC019, NAC domain containing protein 19, NAC019, NAC domain containing protein 19 0.815 0.349
43 259040_at AT3G09270 ATGSTU8, glutathione S-transferase TAU 8, GSTU8, glutathione S-transferase TAU 8 0.785 0.209
44 266967_at AT2G39530 [Uncharacterised protein family (UPF0497)] 0.780 0.052
45 245317_at AT4G15610 [Uncharacterised protein family (UPF0497)] 0.780 0.028
46 255575_at AT4G01430 UMAMIT29, Usually multiple acids move in and out Transporters 29 0.779 0.149
47 261135_at AT1G19610 LCR78, LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 78, PDF1.4 0.775 0.045
48 256012_at AT1G19250 FMO1, flavin-dependent monooxygenase 1 0.771 0.342
49 254832_at AT4G12490 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.767 0.024
50 246272_at AT4G37150 ATMES9, ARABIDOPSIS THALIANA METHYL ESTERASE 9, MES9, methyl esterase 9 0.759 -0.016
51 261240_at AT1G32940 ATSBT3.5, SBT3.5 0.753 0.197
52 267548_at AT2G32660 AtRLP22, receptor like protein 22, RLP22, receptor like protein 22 0.750 0.204
53 257774_at AT3G29250 AtSDR4, SDR4, short-chain dehydrogenase reductase 4 0.748 -0.093
54 254726_at AT4G13660 ATPRR2, PRR2, pinoresinol reductase 2 0.743 -0.008
55 259559_at AT1G21240 WAK3, wall associated kinase 3 0.740 0.064
56 249527_at AT5G38710 [Methylenetetrahydrofolate reductase family protein] 0.738 0.354
57 250287_at AT5G13330 Rap2.6L, related to AP2 6l 0.721 0.360
58 262382_at AT1G72920 [Toll-Interleukin-Resistance (TIR) domain family protein] 0.718 0.075
59 244932_at ATCG01060 PSAC 0.712 -0.065
60 249454_at AT5G39520 unknown 0.710 0.275
61 266821_at AT2G44840 ATERF13, ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13, EREBP, ERF13, ethylene-responsive element binding factor 13 0.699 0.153
62 265067_at AT1G03850 ATGRXS13, glutaredoxin 13, GRXS13, glutaredoxin 13 0.696 0.078
63 260551_at AT2G43510 ATTI1, trypsin inhibitor protein 1, TI1, trypsin inhibitor protein 1 0.695 0.437
64 246368_at AT1G51890 [Leucine-rich repeat protein kinase family protein] 0.682 0.138
65 267178_at AT2G37750 unknown 0.681 0.026
66 260405_at AT1G69930 ATGSTU11, glutathione S-transferase TAU 11, GSTU11, glutathione S-transferase TAU 11 0.674 0.284
67 254543_at AT4G19810 ChiC, class V chitinase 0.669 0.033
68 262229_at AT1G68620 [alpha/beta-Hydrolases superfamily protein] 0.667 0.430
69 253392_at AT4G32650 ATKC1, ARABIDOPSIS THALIANA K+ RECTIFYING CHANNEL 1, AtLKT1, A. thaliana low-K+-tolerant 1, KAT3, potassium channel in Arabidopsis thaliana 3, KC1 0.663 0.018
70 256243_at AT3G12500 ATHCHIB, basic chitinase, B-CHI, CHI-B, HCHIB, basic chitinase, PR-3, PATHOGENESIS-RELATED 3, PR3, PATHOGENESIS-RELATED 3 0.661 0.151
71 261984_at AT1G33760 [Integrase-type DNA-binding superfamily protein] 0.655 -0.022
72 248545_at AT5G50260 CEP1, cysteine endopeptidase 1 0.655 0.404
73 263948_at AT2G35980 ATNHL10, ARABIDOPSIS NDR1/HIN1-LIKE 10, NHL10, NDR1/HIN1-LIKE, YLS9, YELLOW-LEAF-SPECIFIC GENE 9 0.650 0.340
74 249481_at AT5G38900 [Thioredoxin superfamily protein] 0.649 0.429
75 254447_at AT4G20860 [FAD-binding Berberine family protein] 0.623 0.224
76 264580_at AT1G05340 unknown 0.621 0.085
77 260706_at AT1G32350 AOX1D, alternative oxidase 1D 0.619 0.343
78 246366_at AT1G51850 [Leucine-rich repeat protein kinase family protein] 0.619 -0.017
79 254764_at AT4G13250 NYC1, NON-YELLOW COLORING 1 0.618 0.044
80 260432_at AT1G68150 ATWRKY9, WRKY9, WRKY DNA-binding protein 9 0.594 0.110
81 264680_at AT1G65510 unknown 0.590 0.074
82 248952_at AT5G45410 unknown 0.589 -0.002
83 247327_at AT5G64120 AtPRX71, PRX71, peroxidase 71 0.586 0.138
84 258975_at AT3G01970 ATWRKY45, WRKY DNA-BINDING PROTEIN 45, WRKY45, WRKY DNA-binding protein 45 0.574 0.409
85 261429_at AT1G18860 ATWRKY61, WRKY DNA-BINDING PROTEIN 61, WRKY61, WRKY DNA-binding protein 61 0.567 0.104
86 248448_at AT5G51190 [Integrase-type DNA-binding superfamily protein] 0.566 0.008
87 264005_at AT2G22470 AGP2, arabinogalactan protein 2, ATAGP2 0.565 0.041
88 266368_at AT2G41380 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] 0.565 0.089
89 247215_at AT5G64905 PROPEP3, elicitor peptide 3 precursor 0.562 0.272
90 250646_at AT5G06720 ATPA2, peroxidase 2, AtPRX53, PA2, peroxidase 2, PRX53, peroxidase 53 0.559 0.203
91 249939_at AT5G22430 [Pollen Ole e 1 allergen and extensin family protein] 0.542 0.034
92 255904_at AT1G17860 [Kunitz family trypsin and protease inhibitor protein] 0.538 0.064
93 253423_at AT4G32280 IAA29, indole-3-acetic acid inducible 29 -0.877 -0.022
94 259784_at AT1G29450 SAUR64, SMALL AUXIN UPREGULATED RNA 64 -0.838 0.006
95 259332_at AT3G03830 SAUR28, SMALL AUXIN UP RNA 28 -0.732 -0.012
96 267614_at AT2G26710 BAS1, PHYB ACTIVATION TAGGED SUPPRESSOR 1, CYP72B1, CYP734A1 -0.686 -0.004
97 247474_at AT5G62280 unknown -0.656 -0.008
98 247878_at AT5G57760 unknown -0.654 -0.028
99 261766_at AT1G15580 ATAUX2-27, AUX2-27, AUXIN-INDUCIBLE 2-27, IAA5, indole-3-acetic acid inducible 5 -0.622 -0.056
100 265806_at AT2G18010 SAUR10, SMALL AUXIN UPREGULATED RNA 10 -0.596 -0.019
101 250012_x_at AT5G18060 SAUR23, SMALL AUXIN UP RNA 23 -0.563 0.023
102 265483_at AT2G15790 CYP40, CYCLOPHILIN 40, SQN, SQUINT -0.514 0.111
103 253532_at AT4G31570 unknown -0.509 0.020
104 261428_at AT1G18870 ATICS2, ARABIDOPSIS ISOCHORISMATE SYNTHASE 2, ICS2, isochorismate synthase 2 -0.501 -0.138
105 252970_at AT4G38850 ATSAUR15, ARABIDOPSIS THALIANA SMALL AUXIN UPREGULATED 15, SAUR-AC1, ARABIDOPSIS COLUMBIA SAUR GENE 1, SAUR15, SMALL AUXIN UPREGULATED 15, SAUR_AC1, SMALL AUXIN UP RNA 1 FROM ARABIDOPSIS THALIANA ECOTYPE COLUMBIA -0.500 0.036
106 266618_at AT2G35480 unknown -0.489 0.014
107 254317_at AT4G22510 unknown -0.486 0.015
108 252204_at AT3G50340 unknown -0.483 -0.062
109 248801_at AT5G47370 HAT2 -0.473 -0.003
110 265422_at AT2G20800 NDB4, NAD(P)H dehydrogenase B4 -0.464 0.015
111 257900_at AT3G28420 [Putative membrane lipoprotein] -0.451 0.005
112 245173_at AT2G47520 AtERF71, Arabidopsis thaliana ethylene response factor 71, ERF71, ethylene response factor 71, HRE2, HYPOXIA RESPONSIVE ERF (ETHYLENE RESPONSE FACTOR) 2 -0.448 -0.004
113 257271_at AT3G28007 AtSWEET4, SWEET4 -0.440 -0.030
114 262412_at AT1G34760 GF14 OMICRON, GRF11, general regulatory factor 11, RHS5, ROOT HAIR SPECIFIC 5 -0.438 0.309
115 245397_at AT4G14560 AXR5, AUXIN RESISTANT 5, IAA1, indole-3-acetic acid inducible 1 -0.427 -0.026
116 262091_at AT1G56160 ATMYB72, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 72, MYB72, myb domain protein 72 -0.424 0.721
117 251178_at AT3G63440 ATCKX6, CYTOKININ OXIDASE 6, ATCKX7, CKX6, cytokinin oxidase/dehydrogenase 6 -0.400 -0.013
118 251017_at AT5G02760 APD7, Arabidopsis Pp2c clade D 7 -0.386 -0.060
119 254550_at AT4G19690 ATIRT1, ARABIDOPSIS IRON-REGULATED TRANSPORTER 1, IRT1, iron-regulated transporter 1 -0.378 0.315
120 265634_at AT2G25530 [AFG1-like ATPase family protein] -0.373 -0.086
121 264324_at AT1G04160 ATXIB, ARABIDOPSIS THALIANA MYOSIN XI B, XI-8, MYOSIN XI-8, XI-B, MYOSIN XI B, XIB, myosin XI B -0.369 -0.017
122 249784_at AT5G24280 GMI1, GAMMA-IRRADIATION AND MITOMYCIN C INDUCED 1 -0.367 -0.054
123 258356_at AT3G14340 unknown -0.362 -0.106
124 245023_at ATCG00080 PSBI, photosystem II reaction center protein I -0.360 -0.025
125 263515_at AT2G21640 unknown -0.352 0.191
126 260070_at AT1G73830 BEE3, BR enhanced expression 3 -0.344 0.017
127 251065_at AT5G01870 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.342 -0.018
128 254371_at AT4G21760 BGLU47, beta-glucosidase 47 -0.341 -0.117
129 261456_at AT1G21050 unknown -0.337 -0.003
130 248321_at AT5G52740 [Copper transport protein family] -0.330 0.018
131 247029_at AT5G67190 DEAR2, DREB and EAR motif protein 2 -0.327 0.022
132 254419_at AT4G21490 NDB3, NAD(P)H dehydrogenase B3 -0.327 0.035
133 248874_at AT5G46460 [Pentatricopeptide repeat (PPR) superfamily protein] -0.323 -0.021
134 261192_at AT1G32870 ANAC013, Arabidopsis NAC domain containing protein 13, ANAC13, NAC domain protein 13, NAC13, NAC domain protein 13 -0.320 0.038
135 251246_at AT3G62100 IAA30, indole-3-acetic acid inducible 30 -0.310 0.016
136 244971_at ATCG00670 CLPP1, CASEINOLYTIC PROTEASE P 1, PCLPP, plastid-encoded CLP P -0.308 -0.045
137 252129_at AT3G50890 AtHB28, homeobox protein 28, HB28, homeobox protein 28, ZHD7, ZINC FINGER HOMEODOMAIN 7 -0.306 -0.037
138 264460_at AT1G10170 ATNFXL1, NF-X-like 1, NFXL1, NF-X-like 1 -0.300 0.027
139 248784_at AT5G47380 unknown -0.294 0.026
140 250099_at AT5G17300 RVE1, REVEILLE 1 -0.293 -0.045
141 262750_at AT1G28710 [Nucleotide-diphospho-sugar transferase family protein] -0.290 -0.072
142 248247_at AT5G53210 SPCH, SPEECHLESS -0.287 -0.019
143 255413_at AT4G03140 [NAD(P)-binding Rossmann-fold superfamily protein] -0.285 -0.013
144 262331_at AT1G64050 unknown -0.285 0.004
145 260248_at AT1G74310 ATHSP101, heat shock protein 101, HOT1, HSP101, heat shock protein 101 -0.283 0.061
146 264209_at AT1G22740 ATRABG3B, RAB7, RAB75, RABG3B, RAB GTPase homolog G3B -0.282 -0.118
147 261451_at AT1G21060 unknown -0.280 -0.069
148 259686_at AT1G63100 [GRAS family transcription factor] -0.277 -0.091
149 249306_at AT5G41400 [RING/U-box superfamily protein] -0.275 0.086
150 266325_at AT2G46630 unknown -0.274 -0.035
151 249125_at AT5G43450 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.273 0.084
152 253660_at AT4G30140 CDEF1, CUTICLE DESTRUCTING FACTOR 1 -0.272 0.209
153 265002_at AT1G24400 AATL2, AMINO ACID TRANSPORTER-LIKE PROTEIN 2, ATLHT2, ARABIDOPSIS LYSINE HISTIDINE TRANSPORTER 2, LHT2, lysine histidine transporter 2 -0.271 -0.018
154 266971_at AT2G39580 unknown -0.267 -0.025
155 245784_at AT1G32190 [alpha/beta-Hydrolases superfamily protein] -0.265 -0.087
156 256132_at AT1G13610 [alpha/beta-Hydrolases superfamily protein] -0.260 -0.050
157 245336_at AT4G16515 CLEL 6, CLE-like 6, GLV1, GOLVEN 1, RGF6, root meristem growth factor 6 -0.256 -0.025
158 248271_at AT5G53420 [CCT motif family protein] -0.255 -0.050
159 266139_at AT2G28085 SAUR42, SMALL AUXIN UPREGULATED RNA 42 -0.253 -0.036
160 245015_at ATCG00490 RBCL -0.252 -0.005
161 258863_at AT3G03300 ATDCL2, DICER-LIKE 2, DCL2, dicer-like 2 -0.249 -0.014
162 246633_at AT1G29720 [Leucine-rich repeat transmembrane protein kinase] -0.247 0.008
163 265151_at AT1G51340 [MATE efflux family protein] -0.246 0.012
164 251310_at AT3G61150 HD-GL2-1, HOMEODOMAIN-GLABRA2 1, HDG1, homeodomain GLABROUS 1 -0.244 -0.003
165 257650_at AT3G16800 [Protein phosphatase 2C family protein] -0.242 -0.001
166 248913_at AT5G45760 [Transducin/WD40 repeat-like superfamily protein] -0.241 -0.045
167 250374_at AT5G11530 EMF1, embryonic flower 1 -0.236 0.003
168 259185_at AT3G01550 ATPPT2, PHOSPHOENOLPYRUVATE (PEP)/PHOSPHATE TRANSLOCATOR 2, PPT2, phosphoenolpyruvate (pep)/phosphate translocator 2 -0.234 0.063
169 251374_at AT3G60390 HAT3, homeobox-leucine zipper protein 3 -0.233 -0.032
170 259367_at AT1G69070 unknown -0.231 -0.057
171 250572_at AT5G08210 MIR834A, microRNA834A -0.230 0.061
172 262534_at AT1G17040 ATSHA, ARABIDOPSIS THALIANA SH2 DOMAIN PROTEIN A, SHA, SH2 domain protein A, STATLA, STAT-TYPE LINKER-SH2 DOMAIN FACTOR A -0.228 -0.053
173 249752_at AT5G24660 LSU2, RESPONSE TO LOW SULFUR 2 -0.228 -0.107
174 251183_at AT3G62630 unknown -0.227 -0.091
175 258300_at AT3G23340 ckl10, casein kinase I-like 10 -0.226 -0.049
176 263732_at AT1G59980 ARL2, ARG1-like 2, ATDJC39, GPS4, gravity persistence signal 4 -0.225 -0.096
177 260522_x_at AT2G41730 unknown -0.225 0.342
178 264042_at AT2G03760 AtSOT1, AtSOT12, sulphotransferase 12, ATST1, ARABIDOPSIS THALIANA SULFOTRANSFERASE 1, AtSULT202A1, RAR047, SOT12, sulphotransferase 12, ST, ST1, SULFOTRANSFERASE 1, SULT202A1, sulfotransferase 202A1 -0.224 0.104
179 250467_at AT5G10100 TPPI, trehalose-6-phosphate phosphatase I -0.224 -0.301
180 250344_at AT5G11930 [Thioredoxin superfamily protein] -0.223 -0.110
181 258270_at AT3G15650 [alpha/beta-Hydrolases superfamily protein] -0.223 0.061
182 258379_at AT3G16700 [Fumarylacetoacetate (FAA) hydrolase family] -0.222 -0.000
183 256374_at AT1G66730 AtLIG6, DNA LIGASE 6, LIG6, DNA LIGASE 6 -0.221 -0.050