4.0:Information of module
dorn1-1 Root MES buffer 30 min
In comparison with seedling h S Exp help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006412 translation BP 6.857e-09
GO:0001510 RNA methylation BP 4.815e-06
GO:0009451 RNA modification BP 3.660e-05
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0042221 response to chemical BP 7.843e-07
GO:0050896 response to stimulus BP 1.312e-06
GO:0006497 protein lipidation BP 2.143e-06
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
dorn1-1 Root MES buffer 30 min		 Log2 signal ratio
seedling h S Exp
1 252545_at AT3G45820 unknown 0.656 -0.011
2 248322_at AT5G52760 [Copper transport protein family] 0.406 -0.050
3 257203_at AT3G23730 XTH16, xyloglucan endotransglucosylase/hydrolase 16 0.327 -0.088
4 258851_at AT3G03190 ATGSTF11, glutathione S-transferase F11, ATGSTF6, ARABIDOPSIS GLUTATHIONE-S-TRANSFERASE 6, GSTF11, glutathione S-transferase F11 0.287 0.638
5 248752_at AT5G47600 [HSP20-like chaperones superfamily protein] 0.284 0.012
6 267173_at AT2G37560 ATORC2, ORIGIN RECOGNITION COMPLEX SECOND LARGEST SUBUNIT 2, ORC2, origin recognition complex second largest subunit 2 0.239 0.059
7 250892_at AT5G03760 ATCSLA09, ATCSLA9, CSLA09, CSLA9, CELLULOSE SYNTHASE LIKE A9, RAT4, RESISTANT TO AGROBACTERIUM TRANSFORMATION 4 0.235 -0.110
8 247224_at AT5G65080 AGL68, AGAMOUS-like 68, MAF5, MADS AFFECTING FLOWERING 5 0.221 -0.059
9 255621_at AT4G01390 [TRAF-like family protein] 0.212 0.031
10 264166_at AT1G65370 [TRAF-like family protein] 0.210 0.031
11 267636_at AT2G42110 unknown 0.207 -0.034
12 253579_at AT4G30610 BRS1, BRI1 SUPPRESSOR 1, SCPL24, SERINE CARBOXYPEPTIDASE 24 PRECURSOR 0.203 -0.013
13 264763_at AT1G61450 unknown 0.187 -0.006
14 252261_at AT3G49500 RDR6, RNA-dependent RNA polymerase 6, SDE1, SILENCING DEFECTIVE 1, SGS2, SUPPRESSOR OF GENE SILENCING 2 0.186 -0.029
15 253055_at AT4G37630 CYCD5;1, cyclin d5;1 0.182 0.044
16 257204_at AT3G23805 RALFL24, ralf-like 24 0.181 -0.056
17 263474_at AT2G31725 unknown 0.181 0.122
18 254391_at AT4G21590 ENDO3, endonuclease 3 0.178 -0.074
19 247640_at AT5G60610 [F-box/RNI-like superfamily protein] 0.157 -0.024
20 261636_at AT1G50110 [D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein] 0.152 -0.084
21 250198_at AT5G14100 ABCI11, ATP-binding cassette I11, ATNAP14, ARABIDOPSIS THALIANANON-INTRINSIC ABC PROTEIN 14, NAP14, non-intrinsic ABC protein 14 0.150 0.137
22 246516_at AT5G15740 [O-fucosyltransferase family protein] 0.149 -0.042
23 266688_at AT2G19660 [Cysteine/Histidine-rich C1 domain family protein] 0.149 -0.013
24 260683_at AT1G17560 HLL, HUELLENLOS 0.145 0.057
25 262086_at AT1G56050 [GTP-binding protein-related] 0.145 0.203
26 262325_at AT1G64160 AtDIR5, DIR5, dirigent protein 5 0.145 0.038
27 248015_at AT5G56370 [F-box/RNI-like/FBD-like domains-containing protein] 0.143 0.034
28 255583_at AT4G01510 ARV2 0.142 -0.061
29 266253_at AT2G27840 HD2D, histone deacetylase 2D, HDA13, HISTONE DEACETYLASE 13, HDT04, HDT4 0.140 0.341
30 255887_at AT1G20370 [Pseudouridine synthase family protein] 0.139 0.181
31 252281_at AT3G49320 [Metal-dependent protein hydrolase] 0.138 0.198
32 254181_at AT4G23940 ARC1, ACCUMULATION AND REPLICATION OF CHLOROPLASTS 1, FtsHi1, FTSH inactive protease 1 0.138 -0.028
33 247223_at AT5G65070 AGL69, AGAMOUS-like 69, FCL4, MAF4, MADS AFFECTING FLOWERING 4 0.137 -0.001
34 251576_at AT3G58200 [TRAF-like family protein] 0.136 0.064
35 252946_at AT4G39235 unknown 0.135 -0.024
36 254182_at AT4G23950 [Galactose-binding protein] 0.134 -0.013
37 248476_at AT5G50890 [alpha/beta-Hydrolases superfamily protein] 0.134 0.097
38 249258_at AT5G41650 [Lactoylglutathione lyase / glyoxalase I family protein] 0.133 0.008
39 257724_at AT3G18510 unknown 0.130 0.072
40 265065_at AT1G03980 ATPCS2, phytochelatin synthase 2, PCS2, phytochelatin synthase 2 0.128 -0.025
41 267078_at AT2G40960 [Single-stranded nucleic acid binding R3H protein] 0.127 0.019
42 266008_at AT2G37390 NAKR2, SODIUM POTASSIUM ROOT DEFECTIVE 2 0.124 -0.011
43 266801_at AT2G22870 EMB2001, embryo defective 2001 0.123 0.257
44 261025_at AT1G01225 [NC domain-containing protein-related] 0.122 -0.058
45 245479_at AT4G16140 [proline-rich family protein] 0.122 0.079
46 246808_at AT5G27110 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.121 0.047
47 264689_at AT1G09900 [Pentatricopeptide repeat (PPR-like) superfamily protein] 0.120 0.194
48 258277_at AT3G26830 CYP71B15, PAD3, PHYTOALEXIN DEFICIENT 3 0.120 -0.321
49 246731_at AT5G27630 ACBP5, acyl-CoA binding protein 5, AtACBP5 0.119 -0.041
50 255558_at AT4G01900 GLB1, GLNB1 homolog, PII 0.119 0.029
51 253726_at AT4G29430 rps15ae, ribosomal protein S15A E 0.119 0.064
52 265646_at AT2G27360 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.117 -0.033
53 262245_at AT1G48240 ATNPSN12, NPSN12, novel plant snare 12 0.114 -0.032
54 250537_at AT5G08565 [Transcription initiation Spt4-like protein] 0.108 0.051
55 248619_at AT5G49630 AAP6, amino acid permease 6 0.108 0.051
56 253286_at AT4G34260 AXY8, ALTERED XYLOGLUCAN 8, FUC95A 0.106 -0.015
57 253782_at AT4G28590 AtECB1, ECB1, early chloroplast biogenesis 1, MRL7, Mesophyll-cell RNAi Library line 7, SVR4, SUPPRESSOR OF VARIEGATION 4 0.106 0.095
58 257013_at AT3G26922 [F-box/RNI-like superfamily protein] 0.105 0.028
59 251574_at AT3G58100 PDCB5, plasmodesmata callose-binding protein 5 0.104 0.014
60 255939_at AT1G12730 [GPI transamidase subunit PIG-U] 0.104 0.023
61 256150_at AT1G55120 AtcwINV3, 6-fructan exohydrolase, ATFRUCT5, beta-fructofuranosidase 5, FRUCT5, beta-fructofuranosidase 5 0.103 0.104
62 253085_s_at AT4G36280 CRH1, CRT1 Homologue 1, MORC2, microrchidia 2 0.102 0.020
63 263630_at AT2G04845 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] 0.102 0.022
64 266264_at AT2G27775 unknown 0.102 0.236
65 246269_at AT4G37110 [Zinc-finger domain of monoamine-oxidase A repressor R1] 0.101 0.088
66 256484_at AT1G31430 [Pentatricopeptide repeat (PPR-like) superfamily protein] 0.100 0.064
67 248570_at AT5G49780 [Leucine-rich repeat protein kinase family protein] 0.100 -0.045
68 249060_at AT5G44560 VPS2.2 0.099 -0.036
69 265824_at AT2G35650 ATCSLA07, cellulose synthase like, ATCSLA7, CSLA07, CSLA07, cellulose synthase like, CSLA7, CELLULOSE SYNTHASE LIKE A7 0.099 -0.022
70 260097_at AT1G73220 AtOCT1, organic cation/carnitine transporter1, OCT1, organic cation/carnitine transporter1 -0.576 -0.093
71 266098_at AT2G37870 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.575 0.015
72 260495_at AT2G41810 unknown -0.473 -0.150
73 266900_at AT2G34610 unknown -0.410 0.086
74 267228_at AT2G43890 [Pectin lyase-like superfamily protein] -0.382 -0.131
75 256162_at AT1G55390 [Cysteine/Histidine-rich C1 domain family protein] -0.359 -0.120
76 261675_at AT1G18290 unknown -0.329 0.025
77 262388_at AT1G49320 unknown -0.289 -0.031
78 266327_at AT2G46680 ATHB-7, homeobox 7, ATHB7, ARABIDOPSIS THALIANA HOMEOBOX 7, HB-7, homeobox 7 -0.275 -0.043
79 267240_at AT2G02680 [Cysteine/Histidine-rich C1 domain family protein] -0.271 -0.009
80 257163_at AT3G24310 ATMYB71, MYB DOMAIN PROTEIN 71, MYB305, myb domain protein 305 -0.266 -0.049
81 267414_at AT2G34790 EDA28, EMBRYO SAC DEVELOPMENT ARREST 28, MEE23, MATERNAL EFFECT EMBRYO ARREST 23 -0.241 -0.012
82 259846_at AT1G72140 [Major facilitator superfamily protein] -0.240 0.056
83 264680_at AT1G65510 unknown -0.220 -0.109
84 248621_at AT5G49350 [Glycine-rich protein family] -0.215 0.136
85 263005_at AT1G54540 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] -0.214 -0.111
86 253886_at AT4G27710 CYP709B3, cytochrome P450, family 709, subfamily B, polypeptide 3 -0.211 -0.124
87 264301_at AT1G78780 [pathogenesis-related family protein] -0.207 -0.105
88 266690_at AT2G19900 ATNADP-ME1, Arabidopsis thaliana NADP-malic enzyme 1, NADP-ME1, NADP-malic enzyme 1 -0.204 0.008
89 262454_at AT1G11190 BFN1, bifunctional nuclease i, ENDO1, ENDONUCLEASE 1 -0.199 -0.085
90 252403_at AT3G48080 [alpha/beta-Hydrolases superfamily protein] -0.193 0.042
91 265685_at AT2G24430 ANAC038, NAC domain containing protein 38, ANAC039, Arabidopsis NAC domain containing protein 39, NAC038, NAC domain containing protein 38 -0.182 -0.019
92 266917_at AT2G45830 DTA2, downstream target of AGL15 2 -0.179 -0.077
93 249562_at AT5G38350 [Disease resistance protein (NBS-LRR class) family] -0.179 -0.069
94 267343_at AT2G44260 unknown -0.178 -0.058
95 263282_at AT2G14095 unknown -0.177 -0.110
96 265414_at AT2G16660 [Major facilitator superfamily protein] -0.176 0.041
97 259586_at AT1G28100 unknown -0.174 0.091
98 266849_at AT2G25940 ALPHA-VPE, alpha-vacuolar processing enzyme, ALPHAVPE -0.172 -0.126
99 257129_at AT3G20100 CYP705A19, cytochrome P450, family 705, subfamily A, polypeptide 19 -0.168 -0.027
100 257458_at AT2G05400 [Ubiquitin-specific protease family C19-related protein] -0.168 -0.011
101 263536_at AT2G25000 ATWRKY60, WRKY60, WRKY DNA-binding protein 60 -0.167 -0.034
102 257026_at AT3G19200 unknown -0.165 0.021
103 249047_at AT5G44410 [FAD-binding Berberine family protein] -0.164 -0.059
104 249800_at AT5G23660 AtSWEET12, MTN3, homolog of Medicago truncatula MTN3, SWEET12 -0.162 -0.038
105 255521_at AT4G02280 ATSUS3, SUS3, sucrose synthase 3 -0.158 -0.076
106 252286_at AT3G49070 unknown -0.158 -0.013
107 264184_at AT1G54790 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.158 -0.158
108 261640_at AT1G49960 [Xanthine/uracil permease family protein] -0.155 0.078
109 261393_at AT1G79580 ANAC033, Arabidopsis NAC domain containing protein 33, SMB, SOMBRERO, URP7, UAS-TAGGED ROOT PATTERNING7 -0.155 -0.021
110 255129_at AT4G08290 UMAMIT20, Usually multiple acids move in and out Transporters 20 -0.150 -0.169
111 262826_at AT1G13080 CYP71B2, cytochrome P450, family 71, subfamily B, polypeptide 2 -0.149 -0.076
112 260225_at AT1G74590 ATGSTU10, GLUTATHIONE S-TRANSFERASE TAU 10, GSTU10, glutathione S-transferase TAU 10 -0.148 -0.125
113 260491_at AT1G51440 DALL2, DAD1-Like Lipase 2 -0.146 0.011
114 260058_at AT1G78100 AUF1, auxin up-regulated f-box protein 1 -0.145 -0.035
115 253662_at AT4G30080 ARF16, auxin response factor 16 -0.142 -0.022
116 264960_at AT1G76930 ATEXT1, EXTENSIN 1, ATEXT4, extensin 4, EXT1, extensin 1, EXT4, extensin 4, ORG5, OBP3-RESPONSIVE GENE 5 -0.140 -0.083
117 250664_at AT5G07080 [HXXXD-type acyl-transferase family protein] -0.140 -0.057
118 265546_at AT2G28240 [ATP-dependent helicase family protein] -0.140 -0.017
119 253936_at AT4G26880 [Stigma-specific Stig1 family protein] -0.138 -0.027
120 256515_at AT1G66020 [Terpenoid cyclases/Protein prenyltransferases superfamily protein] -0.137 -0.130
121 250024_at AT5G18270 ANAC087, Arabidopsis NAC domain containing protein 87 -0.136 -0.183
122 248140_at AT5G54980 [Uncharacterised protein family (UPF0497)] -0.136 -0.076
123 247686_at AT5G59700 [Protein kinase superfamily protein] -0.136 -0.063
124 250810_at AT5G05090 [Homeodomain-like superfamily protein] -0.135 -0.113
125 251297_at AT3G62020 GLP10, germin-like protein 10 -0.133 -0.082
126 260380_at AT1G73870 BBX16, B-box domain protein 16, COL7, CONSTANS-LIKE 7 -0.132 0.047
127 249346_at AT5G40780 LHT1, lysine histidine transporter 1 -0.132 -0.063
128 246272_at AT4G37150 ATMES9, ARABIDOPSIS THALIANA METHYL ESTERASE 9, MES9, methyl esterase 9 -0.131 -0.110
129 258170_at AT3G21600 [Senescence/dehydration-associated protein-related] -0.131 -0.054
130 258287_at AT3G15990 SULTR3;4, sulfate transporter 3;4 -0.130 -0.104
131 250223_at AT5G14070 ROXY2 -0.129 0.081
132 266844_at AT2G26120 [glycine-rich protein] -0.128 0.002
133 254561_at AT4G19160 unknown -0.128 -0.024
134 258905_at AT3G06390 [Uncharacterised protein family (UPF0497)] -0.127 0.058
135 252488_at AT3G46700 [UDP-Glycosyltransferase superfamily protein] -0.126 0.007
136 251188_at AT3G62730 unknown -0.126 0.039
137 262780_at AT1G13090 CYP71B28, cytochrome P450, family 71, subfamily B, polypeptide 28 -0.126 -0.091