4.0:Information of module
4x
In comparison with shoot-10 μM DEX- 12 hr help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010200 response to chitin BP 1.397e-22
GO:0010243 response to organonitrogen compound BP 9.640e-22
GO:0009719 response to endogenous stimulus BP 2.106e-19
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009629 response to gravity BP 1.726e-13
GO:0009630 gravitropism BP 3.994e-13
GO:0009606 tropism BP 9.553e-13
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
4x		 Log2 signal ratio
shoot-10 μM DEX- 12 hr
1 252367_at AT3G48360 ATBT2, BT2, BTB and TAZ domain protein 2 0.712 0.234
2 253763_at AT4G28850 ATXTH26, XTH26, xyloglucan endotransglucosylase/hydrolase 26 0.579 -0.024
3 266353_at AT2G01520 MLP328, MLP-like protein 328, ZCE1, (Zusammen-CA)-enhanced 1 0.572 0.267
4 263376_at AT2G20520 FLA6, FASCICLIN-like arabinogalactan 6 0.525 -0.009
5 255632_at AT4G00680 ADF8, actin depolymerizing factor 8 0.523 -0.042
6 249773_at AT5G24140 SQP2, squalene monooxygenase 2 0.501 0.048
7 249101_at AT5G43580 UPI, UNUSUAL SERINE PROTEASE INHIBITOR 0.485 0.128
8 254907_at AT4G11190 [Disease resistance-responsive (dirigent-like protein) family protein] 0.462 -0.008
9 258395_at AT3G15500 ANAC055, NAC domain containing protein 55, ATNAC3, NAC domain containing protein 3, NAC055, NAC domain containing protein 55, NAC3, NAC domain containing protein 3 0.460 0.218
10 249675_at AT5G35940 [Mannose-binding lectin superfamily protein] 0.450 -0.001
11 254231_at AT4G23810 ATWRKY53, WRKY53 0.446 0.083
12 266766_at AT2G46880 ATPAP14, PAP14, purple acid phosphatase 14 0.443 0.022
13 254107_at AT4G25220 AtG3Pp2, glycerol-3-phosphate permease 2, G3Pp2, glycerol-3-phosphate permease 2, RHS15, root hair specific 15 0.442 -0.024
14 258402_at AT3G15450 [Aluminium induced protein with YGL and LRDR motifs] 0.442 0.413
15 259399_at AT1G17710 AtPEPC1, Arabidopsis thaliana phosphoethanolamine/phosphocholine phosphatase 1, PEPC1, phosphoethanolamine/phosphocholine phosphatase 1 0.435 0.059
16 263584_at AT2G17040 anac036, NAC domain containing protein 36, NAC036, NAC domain containing protein 36 0.411 0.085
17 252345_at AT3G48640 unknown 0.410 0.075
18 267238_at AT2G44130 KMD3, KISS ME DEADLY 3 0.389 0.333
19 245967_at AT5G19800 [hydroxyproline-rich glycoprotein family protein] 0.388 0.028
20 254025_at AT4G25790 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.388 -0.016
21 249934_at AT5G22410 RHS18, root hair specific 18 0.377 0.043
22 251745_at AT3G55980 ATSZF1, SZF1, salt-inducible zinc finger 1 0.375 0.231
23 265387_at AT2G20670 unknown 0.371 0.418
24 260668_at AT1G19530 unknown 0.369 0.021
25 247914_at AT5G57540 AtXTH13, XTH13, xyloglucan endotransglucosylase/hydrolase 13 0.365 0.009
26 247949_at AT5G57220 CYP81F2, cytochrome P450, family 81, subfamily F, polypeptide 2 0.364 0.096
27 251705_at AT3G56400 ATWRKY70, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 70, WRKY70, WRKY DNA-binding protein 70 0.359 0.098
28 254326_at AT4G22610 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.358 -0.056
29 263614_at AT2G25240 AtCCP3, CCP3, conserved in ciliated species and in the land plants 3 0.352 -0.067
30 264029_at AT2G03720 MRH6, morphogenesis of root hair 6 0.348 -0.091
31 266656_at AT2G25900 ATCTH, ATTZF1, A. THALIANA TANDEM ZINC FINGER PROTEIN 1 0.334 0.288
32 249814_at AT5G23840 [MD-2-related lipid recognition domain-containing protein] 0.333 0.018
33 257421_at AT1G12030 unknown 0.331 -0.005
34 260287_at AT1G80440 KFB20, Kelch repeat F-box 20, KMD1, KISS ME DEADLY 1 0.327 0.426
35 245636_at AT1G25240 [ENTH/VHS/GAT family protein] 0.325 -0.029
36 256460_at AT1G36240 [Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein] 0.324 0.038
37 257774_at AT3G29250 AtSDR4, SDR4, short-chain dehydrogenase reductase 4 0.324 0.202
38 265184_at AT1G23710 unknown 0.320 0.096
39 251039_at AT5G02020 SIS, Salt Induced Serine rich 0.315 0.065
40 256337_at AT1G72060 [serine-type endopeptidase inhibitors] 0.314 0.068
41 263539_at AT2G24850 TAT, TYROSINE AMINOTRANSFERASE, TAT3, tyrosine aminotransferase 3 0.310 0.418
42 261157_at AT1G34510 [Peroxidase superfamily protein] 0.309 -0.019
43 253613_at AT4G30320 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.307 -0.006
44 261449_at AT1G21120 IGMT2, indole glucosinolate O-methyltransferase 2 0.307 0.070
45 252833_at AT4G40090 AGP3, arabinogalactan protein 3 0.304 -0.037
46 249923_at AT5G19120 [Eukaryotic aspartyl protease family protein] 0.301 0.210
47 247871_at AT5G57530 AtXTH12, XTH12, xyloglucan endotransglucosylase/hydrolase 12 0.300 -0.043
48 261991_at AT1G33700 [Beta-glucosidase, GBA2 type family protein] 0.297 -0.042
49 264339_at AT1G70290 ATTPS8, ATTPSC, TPS8, trehalose-6-phosphatase synthase S8 0.297 0.214
50 256935_at AT3G22570 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.295 -0.060
51 256368_at AT1G66800 [NAD(P)-binding Rossmann-fold superfamily protein] 0.293 -0.034
52 253874_at AT4G27450 [Aluminium induced protein with YGL and LRDR motifs] 0.291 0.132
53 266259_at AT2G27830 unknown 0.290 0.200
54 259143_at AT3G10190 [Calcium-binding EF-hand family protein] 0.289 0.058
55 253353_at AT4G33730 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] 0.289 -0.020
56 249009_at AT5G44610 MAP18, microtubule-associated protein 18, PCAP2, PLASMA MEMBRANE ASSOCIATED CA2+-BINDING PROTEIN-2 0.288 -0.028
57 246652_at AT5G35190 EXT13, extensin 13 0.287 0.016
58 253684_at AT4G29690 [Alkaline-phosphatase-like family protein] 0.287 -0.012
59 262838_at AT1G14960 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] 0.285 -0.064
60 249862_at AT5G22920 [CHY-type/CTCHY-type/RING-type Zinc finger protein] 0.284 0.165
61 250632_at AT5G07450 CYCP4;3, cyclin p4;3 0.283 0.011
62 256352_at AT1G54970 ATPRP1, proline-rich protein 1, PRP1, proline-rich protein 1, RHS7, ROOT HAIR SPECIFIC 7 0.281 -0.007
63 266396_at AT2G38790 unknown 0.277 0.011
64 246825_at AT5G26260 [TRAF-like family protein] 0.277 0.069
65 252374_at AT3G48100 ARR5, response regulator 5, ATRR2, ARABIDOPSIS THALIANA RESPONSE REGULATOR 2, IBC6, INDUCED BY CYTOKININ 6, RR5, response regulator 5 0.275 0.066
66 260366_at AT1G70460 AtPERK13, proline-rich extensin-like receptor kinase 13, PERK13, proline-rich extensin-like receptor kinase 13, RHS10, root hair specific 10 0.274 -0.030
67 258832_at AT3G07070 [Protein kinase superfamily protein] 0.273 -0.059
68 254255_at AT4G23220 CRK14, cysteine-rich RLK (RECEPTOR-like protein kinase) 14 0.270 -0.041
69 249337_at AT5G41080 AtGDPD2, GDPD2, glycerophosphodiester phosphodiesterase 2 0.269 0.204
70 259195_at AT3G01730 unknown 0.265 -0.011
71 254276_at AT4G22820 [A20/AN1-like zinc finger family protein] 0.263 -0.008
72 264347_at AT1G12040 LRX1, leucine-rich repeat/extensin 1 0.261 -0.009
73 267028_at AT2G38470 ATWRKY33, WRKY DNA-BINDING PROTEIN 33, WRKY33, WRKY DNA-binding protein 33 0.259 0.149
74 247393_at AT5G63130 [Octicosapeptide/Phox/Bem1p family protein] 0.256 0.001
75 245765_at AT1G33600 [Leucine-rich repeat (LRR) family protein] 0.254 0.061
76 259015_at AT3G07350 unknown 0.252 0.163
77 246854_at AT5G26200 [Mitochondrial substrate carrier family protein] 0.250 -0.011
78 258765_at AT3G10710 RHS12, root hair specific 12 0.250 0.012
79 251226_at AT3G62680 ATPRP3, ARABIDOPSIS THALIANA PROLINE-RICH PROTEIN 3, PRP3, proline-rich protein 3 0.248 0.042
80 257623_at AT3G26210 CYP71B23, cytochrome P450, family 71, subfamily B, polypeptide 23 0.248 0.170
81 256300_at AT1G69490 ANAC029, Arabidopsis NAC domain containing protein 29, ATNAP, NAC-LIKE, ACTIVATED BY AP3/PI, NAP, NAC-like, activated by AP3/PI 0.245 0.313
82 253720_at AT4G29270 [HAD superfamily, subfamily IIIB acid phosphatase ] 0.244 0.080
83 260266_at AT1G68520 BBX14, B-box domain protein 14 0.239 0.137
84 253872_at AT4G27410 ANAC072, Arabidopsis NAC domain containing protein 72, RD26, RESPONSIVE TO DESICCATION 26 0.239 0.167
85 259878_at AT1G76790 IGMT5, indole glucosinolate O-methyltransferase 5 0.238 0.049
86 259977_at AT1G76590 [PLATZ transcription factor family protein] 0.236 0.035
87 254178_at AT4G23880 unknown 0.236 0.057
88 246991_at AT5G67400 RHS19, root hair specific 19 0.233 0.046
89 255579_at AT4G01460 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.233 0.095
90 259364_at AT1G13260 EDF4, ETHYLENE RESPONSE DNA BINDING FACTOR 4, RAV1, related to ABI3/VP1 1 0.233 0.204
91 260005_at AT1G67920 unknown 0.233 -0.014
92 264635_at AT1G65500 unknown 0.232 0.005
93 255516_at AT4G02270 RHS13, root hair specific 13 0.232 0.021
94 264375_at AT2G25090 AtCIPK16, CIPK16, CBL-interacting protein kinase 16, SnRK3.18, SNF1-RELATED PROTEIN KINASE 3.18 0.231 -0.020
95 257022_at AT3G19580 AZF2, zinc-finger protein 2, ZF2, zinc-finger protein 2 0.230 0.164
96 255511_at AT4G02075 PIT1, pitchoun 1 0.229 0.187
97 259479_at AT1G19020 unknown 0.227 0.117
98 263552_x_at AT2G24980 EXT6, extensin 6 0.227 -0.028
99 252250_at AT3G49790 [Carbohydrate-binding protein] 0.226 0.216
100 246149_at AT5G19890 [Peroxidase superfamily protein] 0.226 -0.026
101 253502_at AT4G31940 CYP82C4, cytochrome P450, family 82, subfamily C, polypeptide 4 -1.072 0.023
102 248048_at AT5G56080 ATNAS2, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 2, NAS2, nicotianamine synthase 2 -0.701 -0.077
103 259264_at AT3G01260 [Galactose mutarotase-like superfamily protein] -0.557 -0.052
104 250983_at AT5G02780 GSTL1, glutathione transferase lambda 1 -0.470 0.064
105 251545_at AT3G58810 ATMTP3, ARABIDOPSIS METAL TOLERANCE PROTEIN 3, ATMTPA2, MTP3, METAL TOLERANCE PROTEIN 3, MTPA2, metal tolerance protein A2 -0.461 0.011
106 251293_at AT3G61930 unknown -0.424 0.006
107 257689_at AT3G12820 AtMYB10, myb domain protein 10, MYB10, myb domain protein 10 -0.412 0.009
108 254550_at AT4G19690 ATIRT1, ARABIDOPSIS IRON-REGULATED TRANSPORTER 1, IRT1, iron-regulated transporter 1 -0.410 0.001
109 251620_at AT3G58060 [Cation efflux family protein] -0.381 -0.048
110 266578_at AT2G23910 [NAD(P)-binding Rossmann-fold superfamily protein] -0.380 -0.021
111 246375_at AT1G51830 [Leucine-rich repeat protein kinase family protein] -0.341 0.043
112 251436_at AT3G59900 ARGOS, AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE -0.324 -0.047
113 266222_at AT2G28780 unknown -0.311 -0.104
114 265511_at AT2G05540 [Glycine-rich protein family] -0.267 -0.011
115 254571_at AT4G19370 unknown -0.262 -0.041
116 246142_at AT5G19970 unknown -0.255 -0.014
117 256097_at AT1G13670 unknown -0.248 0.091
118 245126_at AT2G47460 ATMYB12, MYB DOMAIN PROTEIN 12, MYB12, myb domain protein 12, PFG1, PRODUCTION OF FLAVONOL GLYCOSIDES 1 -0.246 -0.065
119 259443_at AT1G02360 [Chitinase family protein] -0.239 -0.012
120 253835_at AT4G27820 BGLU9, beta glucosidase 9 -0.236 -0.023
121 252232_at AT3G49760 AtbZIP5, basic leucine-zipper 5, bZIP5, basic leucine-zipper 5 -0.234 -0.031
122 257262_at AT3G21890 BBX31, B-box domain protein 31 -0.233 -0.123
123 261708_at AT1G32740 [SBP (S-ribonuclease binding protein) family protein] -0.224 -0.068
124 252661_at AT3G44450 unknown -0.222 -0.072
125 262373_at AT1G73120 unknown -0.222 -0.039
126 258618_at AT3G02885 GASA5, GAST1 protein homolog 5 -0.215 -0.071
127 258028_at AT3G27473 [Cysteine/Histidine-rich C1 domain family protein] -0.207 0.015
128 264479_at AT1G77280 [Protein kinase protein with adenine nucleotide alpha hydrolases-like domain] -0.203 -0.055
129 265892_at AT2G15020 unknown -0.200 -0.084
130 250231_at AT5G13910 LEP, LEAFY PETIOLE -0.198 -0.059
131 257456_at AT2G18120 SRS4, SHI-related sequence 4 -0.197 -0.033
132 247463_at AT5G62210 [Embryo-specific protein 3, (ATS3)] -0.193 -0.072
133 250907_at AT5G03670 TRM28, TON1 Recruiting Motif 28 -0.184 0.053
134 260824_at AT1G06720 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.184 0.054
135 248006_at AT5G56250 HAP8, HAPLESS 8 -0.182 0.069
136 263436_at AT2G28690 unknown -0.181 -0.007
137 246467_at AT5G17040 [UDP-Glycosyltransferase superfamily protein] -0.180 -0.030
138 261804_at AT1G30530 UGT78D1, UDP-glucosyl transferase 78D1 -0.179 -0.027
139 245136_at AT2G45210 SAG201, senescence-associated gene 201, SAUR36, SMALL AUXIN UPREGULATED 36 -0.179 -0.012
140 261717_at AT1G18400 BEE1, BR enhanced expression 1 -0.178 -0.006
141 265099_at AT1G03990 [Long-chain fatty alcohol dehydrogenase family protein] -0.176 -0.022
142 262552_at AT1G31350 KUF1, KAR-UP F-box 1 -0.175 0.057
143 261700_at AT1G32690 unknown -0.175 0.030
144 257460_at AT1G75580 SAUR51, SMALL AUXIN UPREGULATED RNA 51 -0.174 -0.240
145 245262_at AT4G16563 [Eukaryotic aspartyl protease family protein] -0.174 0.047
146 246418_at AT5G16960 [Zinc-binding dehydrogenase family protein] -0.173 -0.010
147 248160_at AT5G54470 BBX29, B-box domain protein 29 -0.173 -0.012
148 263283_at AT2G36090 [F-box family protein] -0.172 0.034
149 249071_at AT5G44050 [MATE efflux family protein] -0.171 0.091
150 255858_at AT1G67030 ZFP6, zinc finger protein 6 -0.171 -0.086
151 249942_at AT5G22300 AtNIT4, NITRILASE 4, NIT4, nitrilase 4 -0.171 -0.043
152 256386_at AT1G66540 [Cytochrome P450 superfamily protein] -0.168 -0.022
153 259228_at AT3G07720 [Galactose oxidase/kelch repeat superfamily protein] -0.167 -0.013
154 251062_at AT5G01840 ATOFP1, ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 1, OFP1, ovate family protein 1 -0.167 -0.072
155 253217_at AT4G34970 ADF9, actin depolymerizing factor 9 -0.167 0.032
156 257643_at AT3G25730 EDF3, ethylene response DNA binding factor 3 -0.165 0.056
157 256302_at AT1G69526 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.161 -0.140
158 265939_at AT2G19650 [Cysteine/Histidine-rich C1 domain family protein] -0.161 -0.003
159 247965_at AT5G56540 AGP14, arabinogalactan protein 14, ATAGP14 -0.161 0.023
160 249622_at AT5G37550 unknown -0.160 -0.073
161 252103_at AT3G51410 unknown -0.159 -0.027
162 261585_at AT1G01010 ANAC001, NAC domain containing protein 1, NAC001, NAC domain containing protein 1 -0.156 0.005
163 248596_at AT5G49330 ATMYB111, ARABIDOPSIS MYB DOMAIN PROTEIN 111, MYB111, myb domain protein 111, PFG3, PRODUCTION OF FLAVONOL GLYCOSIDES 3 -0.155 -0.071
164 267592_at AT2G39710 [Eukaryotic aspartyl protease family protein] -0.155 -0.011
165 249191_at AT5G42760 [Leucine carboxyl methyltransferase] -0.153 -0.115
166 261907_at AT1G65060 4CL3, 4-coumarate:CoA ligase 3 -0.151 -0.061
167 255836_at AT2G33440 [RNA-binding (RRM/RBD/RNP motifs) family protein] -0.151 0.017
168 260717_at AT1G48120 [hydrolases] -0.150 -0.026
169 248347_at AT5G52250 EFO1, EARLY FLOWERING BY OVEREXPRESSION 1, RUP1, REPRESSOR OF UV-B PHOTOMORPHOGENESIS 1 -0.148 0.076
170 266532_at AT2G16890 [UDP-Glycosyltransferase superfamily protein] -0.141 -0.011
171 248460_at AT5G50915 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] -0.140 0.003
172 266820_at AT2G44940 [Integrase-type DNA-binding superfamily protein] -0.140 -0.104
173 266849_at AT2G25940 ALPHA-VPE, alpha-vacuolar processing enzyme, ALPHAVPE -0.140 -0.042
174 252820_at AT3G42640 AHA8, H(+)-ATPase 8, HA8, H(+)-ATPase 8 -0.137 -0.003
175 264444_at AT1G27360 SPL11, squamosa promoter-like 11 -0.136 -0.057
176 251914_at AT3G53930 [Protein kinase superfamily protein] -0.134 -0.010
177 253608_at AT4G30290 ATXTH19, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 19, XTH19, xyloglucan endotransglucosylase/hydrolase 19 -0.132 0.059
178 246802_at AT5G27000 ATK4, kinesin 4, KATD, KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA D -0.131 0.036
179 251024_at AT5G02180 [Transmembrane amino acid transporter family protein] -0.131 -0.016
180 257181_at AT3G13190 unknown -0.130 -0.039
181 266590_at AT2G46240 ATBAG6, ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 6, BAG6, BCL-2-associated athanogene 6 -0.128 0.070
182 252010_at AT3G52740 unknown -0.127 -0.053
183 265203_at AT2G36630 [Sulfite exporter TauE/SafE family protein] -0.127 -0.040
184 264506_at AT1G09560 GLP5, germin-like protein 5, PDGLP1, PLASMODESMAL GERMIN-LIKE PROTEIN 1 -0.126 0.049
185 264264_at AT1G09250 AIF4, ATBS1 Interacting Factor 4 -0.125 -0.022
186 253658_at AT4G30120 ATHMA3, A. THALIANA HEAVY METAL ATPASE 3, HMA3, heavy metal atpase 3 -0.124 -0.071
187 253247_at AT4G34610 BLH6, BEL1-like homeodomain 6 -0.124 -0.055
188 254442_at AT4G21060 AtGALT2, GALT2, AGP galactosyltransferase 2 -0.124 -0.083
189 261570_at AT1G01120 KCS1, 3-ketoacyl-CoA synthase 1 -0.124 0.008
190 256630_at AT3G28230 unknown -0.124 0.009
191 266337_at AT2G32390 ATGLR3.5, glutamate receptor 3.5, GLR3.5, glutamate receptor 3.5, GLR6 -0.123 -0.074
192 259322_at AT3G05270 unknown -0.122 0.020
193 245133_at AT2G45310 GAE4, UDP-D-glucuronate 4-epimerase 4 -0.120 -0.015
194 261494_at AT1G28420 HB-1, homeobox-1, RLT1, RINGLET 1 -0.120 -0.033
195 248176_at AT5G54650 ATFH5, FORMIN HOMOLOGY 5, Fh5, formin homology5 -0.120 0.004
196 263680_at AT1G26930 [Galactose oxidase/kelch repeat superfamily protein] -0.120 0.058
197 263791_at AT2G24520 AHA5, H(+)-ATPase 5, HA5, H(+)-ATPase 5 -0.120 0.015
198 245256_at AT4G15090 FAR1, FAR-RED IMPAIRED RESPONSE 1 -0.119 -0.036
199 261447_at AT1G21160 [eukaryotic translation initiation factor 2 (eIF-2) family protein] -0.119 0.022
200 267123_at AT2G23560 ATMES7, ARABIDOPSIS THALIANA METHYL ESTERASE 7, MES7, methyl esterase 7 -0.118 -0.003