4.0:Information of module
3x(p)
In comparison with Differentiation 48h help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010200 response to chitin BP 5.222e-31
GO:0010243 response to organonitrogen compound BP 1.841e-30
GO:0009719 response to endogenous stimulus BP 4.383e-26
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009813 flavonoid biosynthetic process BP 7.585e-10
GO:0010224 response to UV-B BP 1.491e-09
GO:0009812 flavonoid metabolic process BP 1.881e-09
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
3x(p)		 Log2 signal ratio
Differentiation 48h
1 252367_at AT3G48360 ATBT2, BT2, BTB and TAZ domain protein 2 0.637 -1.093
2 252415_at AT3G47340 ASN1, glutamine-dependent asparagine synthase 1, AT-ASN1, ARABIDOPSIS THALIANA GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1, DIN6, DARK INDUCIBLE 6 0.539 -0.771
3 258402_at AT3G15450 [Aluminium induced protein with YGL and LRDR motifs] 0.537 -0.434
4 261892_at AT1G80840 ATWRKY40, WRKY40, WRKY DNA-binding protein 40 0.504 -1.621
5 254231_at AT4G23810 ATWRKY53, WRKY53 0.501 -0.666
6 258395_at AT3G15500 ANAC055, NAC domain containing protein 55, ATNAC3, NAC domain containing protein 3, NAC055, NAC domain containing protein 55, NAC3, NAC domain containing protein 3 0.491 -0.873
7 251745_at AT3G55980 ATSZF1, SZF1, salt-inducible zinc finger 1 0.477 -0.876
8 253161_at AT4G35770 ATSEN1, ARABIDOPSIS THALIANA SENESCENCE 1, DIN1, DARK INDUCIBLE 1, SEN1, SENESCENCE 1, SEN1, SENESCENCE ASSOCIATED GENE 1 0.473 -1.165
9 267357_at AT2G40000 ATHSPRO2, ARABIDOPSIS ORTHOLOG OF SUGAR BEET HS1 PRO-1 2, HSPRO2, ortholog of sugar beet HS1 PRO-1 2 0.468 -0.866
10 261648_at AT1G27730 STZ, salt tolerance zinc finger, ZAT10 0.462 -1.346
11 264774_at AT1G22890 unknown 0.447 -0.929
12 260287_at AT1G80440 KFB20, Kelch repeat F-box 20, KMD1, KISS ME DEADLY 1 0.443 -0.080
13 251705_at AT3G56400 ATWRKY70, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 70, WRKY70, WRKY DNA-binding protein 70 0.443 -0.327
14 265387_at AT2G20670 unknown 0.432 -0.263
15 267238_at AT2G44130 KMD3, KISS ME DEADLY 3 0.425 -0.006
16 261449_at AT1G21120 IGMT2, indole glucosinolate O-methyltransferase 2 0.405 -0.159
17 265478_at AT2G15890 MEE14, maternal effect embryo arrest 14 0.400 -1.035
18 254954_at AT4G10910 unknown 0.395 -0.172
19 266259_at AT2G27830 unknown 0.388 -0.410
20 266656_at AT2G25900 ATCTH, ATTZF1, A. THALIANA TANDEM ZINC FINGER PROTEIN 1 0.385 -0.729
21 253061_at AT4G37610 BT5, BTB and TAZ domain protein 5 0.376 -0.579
22 249101_at AT5G43580 UPI, UNUSUAL SERINE PROTEASE INHIBITOR 0.375 0.214
23 253763_at AT4G28850 ATXTH26, XTH26, xyloglucan endotransglucosylase/hydrolase 26 0.364 -0.108
24 267028_at AT2G38470 ATWRKY33, WRKY DNA-BINDING PROTEIN 33, WRKY33, WRKY DNA-binding protein 33 0.355 -0.648
25 251039_at AT5G02020 SIS, Salt Induced Serine rich 0.355 -0.400
26 263182_at AT1G05575 unknown 0.339 -1.152
27 256300_at AT1G69490 ANAC029, Arabidopsis NAC domain containing protein 29, ATNAP, NAC-LIKE, ACTIVATED BY AP3/PI, NAP, NAC-like, activated by AP3/PI 0.339 -0.880
28 266658_at AT2G25735 unknown 0.337 -0.870
29 249065_at AT5G44260 AtTZF5, TZF5, Tandem CCCH Zinc Finger protein 5 0.326 -0.678
30 256442_at AT3G10930 unknown 0.323 -0.470
31 265184_at AT1G23710 unknown 0.320 -0.713
32 245668_at AT1G28330 AtDRM1, DRM1, DORMANCY-ASSOCIATED PROTEIN 1, DYL1, dormancy-associated protein-like 1 0.318 -0.888
33 245041_at AT2G26530 AR781 0.313 -0.600
34 258939_at AT3G10020 unknown 0.311 -0.608
35 249773_at AT5G24140 SQP2, squalene monooxygenase 2 0.302 -0.123
36 249923_at AT5G19120 [Eukaryotic aspartyl protease family protein] 0.302 -0.226
37 254120_at AT4G24570 DIC2, dicarboxylate carrier 2 0.297 -0.942
38 249862_at AT5G22920 [CHY-type/CTCHY-type/RING-type Zinc finger protein] 0.297 -0.004
39 255753_at AT1G18570 AtMYB51, myb domain protein 51, BW51A, BW51B, HIG1, HIGH INDOLIC GLUCOSINOLATE 1, MYB51, myb domain protein 51 0.293 -0.700
40 246821_at AT5G26920 CBP60G, Cam-binding protein 60-like G 0.288 -0.579
41 259364_at AT1G13260 EDF4, ETHYLENE RESPONSE DNA BINDING FACTOR 4, RAV1, related to ABI3/VP1 1 0.285 -0.772
42 261265_at AT1G26800 [RING/U-box superfamily protein] 0.284 -0.676
43 264379_at AT2G25200 unknown 0.280 -0.391
44 260770_at AT1G49200 [RING/U-box superfamily protein] 0.280 0.223
45 259015_at AT3G07350 unknown 0.277 -0.554
46 260915_at AT1G02660 [alpha/beta-Hydrolases superfamily protein] 0.277 -0.759
47 257022_at AT3G19580 AZF2, zinc-finger protein 2, ZF2, zinc-finger protein 2 0.274 -0.823
48 254178_at AT4G23880 unknown 0.272 -0.309
49 265067_at AT1G03850 ATGRXS13, glutaredoxin 13, GRXS13, glutaredoxin 13 0.271 0.792
50 259143_at AT3G10190 [Calcium-binding EF-hand family protein] 0.270 0.864
51 247540_at AT5G61590 [Integrase-type DNA-binding superfamily protein] 0.269 -0.536
52 259479_at AT1G19020 unknown 0.269 -0.900
53 252250_at AT3G49790 [Carbohydrate-binding protein] 0.269 -0.580
54 264339_at AT1G70290 ATTPS8, ATTPSC, TPS8, trehalose-6-phosphatase synthase S8 0.268 -0.502
55 259977_at AT1G76590 [PLATZ transcription factor family protein] 0.265 -0.821
56 254926_at AT4G11280 ACS6, 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6, ATACS6 0.265 -0.425
57 266072_at AT2G18700 ATTPS11, trehalose phosphatase/synthase 11, ATTPSB, TPS11, trehalose phosphatase/synthase 11, TPS11, TREHALOSE-6-PHOSPHATE SYNTHASE 11 0.262 -0.018
58 249934_at AT5G22410 RHS18, root hair specific 18 0.252 -0.108
59 258262_at AT3G15770 unknown 0.250 -0.100
60 248432_at AT5G51390 unknown 0.249 -0.413
61 247585_at AT5G60680 unknown 0.248 -0.365
62 247925_at AT5G57560 TCH4, Touch 4, XTH22, xyloglucan endotransglucosylase/hydrolase 22 0.245 -0.490
63 255381_at AT4G03510 ATRMA1, RMA1, RING membrane-anchor 1 0.245 -0.107
64 260037_at AT1G68840 AtRAV2, EDF2, ETHYLENE RESPONSE DNA BINDING FACTOR 2, RAP2.8, RELATED TO AP2 8, RAV2, related to ABI3/VP1 2, TEM2, TEMPRANILLO 2 0.243 -0.558
65 259264_at AT3G01260 [Galactose mutarotase-like superfamily protein] -0.454 0.016
66 265665_at AT2G27420 [Cysteine proteinases superfamily protein] -0.283 -0.381
67 245262_at AT4G16563 [Eukaryotic aspartyl protease family protein] -0.252 0.070
68 246375_at AT1G51830 [Leucine-rich repeat protein kinase family protein] -0.249 0.637
69 254571_at AT4G19370 unknown -0.220 -0.089
70 250087_at AT5G17270 [Protein prenylyltransferase superfamily protein] -0.215 0.299
71 256459_at AT1G36180 ACC2, acetyl-CoA carboxylase 2 -0.212 0.468
72 266820_at AT2G44940 [Integrase-type DNA-binding superfamily protein] -0.207 0.441
73 252534_at AT3G46130 ATMYB48, myb domain protein 48, ATMYB48-1, ATMYB48-2, ATMYB48-3, MYB48, myb domain protein 48 -0.182 -0.453
74 261574_at AT1G01190 CYP78A8, cytochrome P450, family 78, subfamily A, polypeptide 8 -0.179 -0.278
75 255858_at AT1G67030 ZFP6, zinc finger protein 6 -0.177 -0.093
76 247015_at AT5G66960 [Prolyl oligopeptidase family protein] -0.169 0.347
77 261717_at AT1G18400 BEE1, BR enhanced expression 1 -0.164 -0.016
78 249426_at AT5G39840 [ATP-dependent RNA helicase, mitochondrial, putative] -0.163 0.655
79 255296_at AT4G04790 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.160 0.308
80 251436_at AT3G59900 ARGOS, AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE -0.159 0.326
81 261804_at AT1G30530 UGT78D1, UDP-glucosyl transferase 78D1 -0.149 -0.169
82 245089_at AT2G45290 TKL2, transketolase 2 -0.149 0.836
83 252661_at AT3G44450 unknown -0.144 0.091
84 258380_at AT3G16650 PRL2, Pleiotropic regulatory locus 2 -0.137 0.362
85 256600_at AT3G14850 TBL41, TRICHOME BIREFRINGENCE-LIKE 41 -0.137 -0.222
86 259003_at AT3G02010 [Pentatricopeptide repeat (PPR) superfamily protein] -0.133 0.303
87 265061_at AT1G61640 [Protein kinase superfamily protein] -0.129 0.113
88 258167_at AT3G21560 BRT1, Bright Trichomes 1, UGT84A2, UDP-glucosyl transferase 84A2 -0.128 -0.181
89 261813_at AT1G08280 [Glycosyltransferase family 29 (sialyltransferase) family protein] -0.128 0.558
90 264452_at AT1G10270 GRP23, glutamine-rich protein 23 -0.125 0.429
91 248596_at AT5G49330 ATMYB111, ARABIDOPSIS MYB DOMAIN PROTEIN 111, MYB111, myb domain protein 111, PFG3, PRODUCTION OF FLAVONOL GLYCOSIDES 3 -0.124 0.176
92 253938_at AT4G26920 [START (StAR-related lipid-transfer) lipid-binding domain] -0.121 -0.124
93 249464_at AT5G39710 EMB2745, EMBRYO DEFECTIVE 2745 -0.120 0.270
94 264704_at AT1G70090 GATL9, GALACTURONOSYLTRANSFERASE-LIKE 9, LGT8, glucosyl transferase family 8 -0.120 -0.447
95 261750_at AT1G76120 [Pseudouridine synthase family protein] -0.120 0.192
96 253247_at AT4G34610 BLH6, BEL1-like homeodomain 6 -0.118 0.012
97 260560_at AT2G43590 [Chitinase family protein] -0.118 0.684
98 253165_at AT4G35320 unknown -0.117 0.134
99 250283_at AT5G13270 RARE1, REQUIRED FOR ACCD RNA EDITING 1 -0.116 0.027
100 245584_at AT4G14940 AO1, amine oxidase 1, ATAO1, amine oxidase 1 -0.116 0.485
101 265939_at AT2G19650 [Cysteine/Histidine-rich C1 domain family protein] -0.115 -0.613
102 248857_at AT5G46640 AHL8, AT-hook motif nuclear localized protein 8 -0.114 -0.115
103 266321_at AT2G46660 CYP78A6, cytochrome P450, family 78, subfamily A, polypeptide 6, EOD3, enhancer of da1-1 -0.114 -0.346
104 258861_at AT3G02060 [DEAD/DEAH box helicase, putative] -0.113 -0.095
105 257852_at AT3G12950 [Trypsin family protein] -0.111 -0.017
106 262941_at AT1G79490 EMB2217, embryo defective 2217 -0.110 0.417
107 266879_at AT2G44590 ADL1D, DYNAMIN-like 1D, DL1D, DYNAMIN-like 1D -0.109 -0.022
108 267123_at AT2G23560 ATMES7, ARABIDOPSIS THALIANA METHYL ESTERASE 7, MES7, methyl esterase 7 -0.109 -0.309
109 257876_at AT3G17130 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.109 0.078
110 249113_at AT5G43790 [Pentatricopeptide repeat (PPR) superfamily protein] -0.108 0.212
111 254632_at AT4G18630 unknown -0.108 1.245
112 256919_at AT3G18970 MEF20, mitochondrial editing factor 20 -0.107 0.062
113 266532_at AT2G16890 [UDP-Glycosyltransferase superfamily protein] -0.107 -0.258
114 252438_at AT3G47390 PHS1, PHOTOSENSITIVE 1, PyrR, pyrimidine reductase -0.105 0.027
115 262651_at AT1G14100 FUT8, fucosyltransferase 8 -0.105 -0.109
116 263805_at AT2G40400 unknown -0.104 -0.237
117 264816_at AT1G03560 [Pentatricopeptide repeat (PPR-like) superfamily protein] -0.104 0.054
118 259605_at AT1G27910 ATPUB45, ARABIDOPSIS THALIANA PLANT U-BOX 45, PUB45, plant U-box 45 -0.104 -0.237
119 253659_at AT4G30150 unknown -0.104 0.284
120 251462_at AT3G59790 ATMPK10, MAP kinase 10, MPK10, MAP kinase 10 -0.103 -0.090
121 246580_at AT1G31770 ABCG14, ATP-binding cassette G14 -0.103 -0.068
122 245277_at AT4G15550 IAGLU, indole-3-acetate beta-D-glucosyltransferase -0.103 -0.122
123 247069_at AT5G66920 sks17, SKU5 similar 17 -0.103 0.379
124 264356_at AT1G03190 ATXPD, ARABIDOPSIS THALIANA XERODERMA PIGMENTOSUM GROUP D, UVH6, ULTRAVIOLET HYPERSENSITIVE 6 -0.102 0.079
125 245109_at AT2G41520 DJC62, DNA J protein C62, TPR15, tetratricopeptide repeat 15 -0.102 0.164
126 253166_at AT4G35290 ATGLR3.2, ATGLUR2, GLR3.2, GLUTAMATE RECEPTOR 3.2, GLUR2, glutamate receptor 2 -0.101 0.168
127 259348_at AT3G03770 [Leucine-rich repeat protein kinase family protein] -0.099 0.161