4.0:Information of module
ddm1-2 rdr6-15
In comparison with CCA1-ox 6am non-polysomal help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0071840 cellular component organization or bioge... BP 1.182e-10
GO:0051301 cell division BP 3.252e-09
GO:0019538 protein metabolic process BP 2.190e-08
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0044763 single-organism cellular process BP 1.829e-07
GO:0006787 porphyrin-containing compound catabolic ... BP 1.678e-06
GO:0033015 tetrapyrrole catabolic process BP 1.678e-06
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
ddm1-2 rdr6-15		 Log2 signal ratio
CCA1-ox 6am non-polysomal
1 265754_x_at AT2G10640 [CACTA-like transposase family (Ptta/En/Spm), has a 7.4e-42 P-value blast match to At5g29026.1/8-244 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana)] 1.645 0.007
2 263675_x_at AT2G04770 [CACTA-like transposase family (Ptta/En/Spm), has a 6.0e-20 P-value blast match to At5g29026.1/8-244 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana)] 1.639 -0.009
3 261619_x_at AT1G33130 [CACTA-like transposase family (Ptta/En/Spm), has a 1.3e-125 P-value blast match to At5g36655.1/81-333 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana)] 1.627 0.059
4 266151_x_at AT2G12300 [CACTA-like transposase family (Ptta/En/Spm), has a 3.8e-41 P-value blast match to At5g29026.1/8-244 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana)] 1.554 0.005
5 261186_at AT1G34530 [CACTA-like transposase family (Ptta/En/Spm), has a 7.8e-116 P-value blast match to At5g36655.1/81-333 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana)] 1.510 -0.005
6 262268_at AT1G42410 [CACTA-like transposase family (Ptta/En/Spm), has a 1.0e-124 P-value blast match to At5g36655.1/81-333 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana)] 1.279 -0.156
7 256748_x_at AT3G30396 [CACTA-like transposase family (Ptta/En/Spm), has a 3.1e-39 P-value blast match to At5g29026.1/8-244 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana)] 1.252 0.078
8 255313_at AT4G04590 [CACTA-like transposase family (Tnp2/En/Spm), has a 5.3e-36 P-value blast match to gb|AAG52024.1|AC022456_5 Tam1-homologous transposon protein TNP2, putative] 1.252 -0.011
9 255246_at AT4G05640 unknown 1.230 -0.095
10 263479_x_at AT2G04000 unknown 1.133 0.088
11 249259_at AT5G41660 unknown 1.127 -0.053
12 262902_x_at AT1G59930 [MADS-box family protein] 1.118 -0.184
13 245203_at AT3G33080 unknown 1.111 -0.164
14 245032_at AT2G26630 [transposase IS4 family protein, contains Pfam profile: PF01609 transposase DDE domain] 1.003 -0.023
15 250979_at AT5G03090 unknown 0.999 0.086
16 261180_at AT1G34590 unknown 0.866 0.123
17 257111_x_at AT3G30450 [similar to heat shock protein binding [Arabidopsis thaliana] (TAIR:AT3G30450.1)] 0.839 -0.051
18 263346_at AT2G05660 [CACTA-like transposase family (Tnp2/En/Spm), has a 0. P-value blast match to gb|AAG52024.1|AC022456_5 Tam1-homologous transposon protein TNP2, putative] 0.823 0.009
19 256449_at AT1G33460 [Mutator-like transposase family, has a 3.6e-40 P-value blast match to GB:AAA21566 mudrA of transposon=MuDR (MuDr-element) (Zea mays)] 0.804 -0.118
20 263292_at AT2G10900 [expressed protein] 0.768 0.002
21 262256_at AT1G53810 [copia-like retrotransposon family, has a 8.0e-248 P-value blast match to GB:AAA57005 Hopscotch polyprotein (Ty1_Copia-element) (Zea mays)] 0.729 -0.027
22 249114_at AT5G43800 [copia-like retrotransposon family, has a 0. P-value blast match to gb|AAG52949.1| gag/pol polyprotein (Endovir1-1) (Arabidopsis thaliana) (Ty1_Copia-family)] 0.700 -0.117
23 263817_at AT2G10070 unknown 0.656 0.074
24 253689_at AT4G29770 unknown 0.649 0.046
25 249737_at AT5G24480 [Beta-galactosidase related protein] 0.639 -0.017
26 255476_at AT4G02490 [non-LTR retrotransposon family (LINE), has a 2.3e-36 P-value blast match to GB:AAA67727 reverse transcriptase (LINE-element) (Mus musculus)] 0.492 0.062
27 250942_at AT5G03350 [Legume lectin family protein] 0.460 0.021
28 248148_at AT5G54930 [AT hook motif-containing protein] 0.443 -0.095
29 258716_at AT3G09700 [Chaperone DnaJ-domain superfamily protein] 0.411 0.059
30 256940_at AT3G30720 QQS, QUA-QUINE STARCH 0.398 -0.031
31 254671_at AT4G18410 [Mutator-like transposase family, has a 8.7e-30 P-value blast match to GB:AAA21566 mudrA of transposon=MuDR (MuDr-element) (Zea mays)] 0.388 0.142
32 254672_at AT4G18420 unknown 0.380 -0.067
33 264536_at AT1G55640 PRA1.G1, prenylated RAB acceptor 1.G1 0.378 0.152
34 265383_at AT2G16780 MSI02, MSI2, MULTICOPY SUPPRESSOR OF IRA1 2, NFC02, NFC2, NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP C 2 0.325 0.023
35 256821_at AT3G22180 [DHHC-type zinc finger family protein] 0.324 0.062
36 262753_at AT1G16340 ATKDSA2, ATKSDA 0.322 -0.009
37 255096_at AT4G08600 unknown 0.318 -0.128
38 254463_at AT4G20280 TAF11, TBP-associated factor 11 0.318 0.062
39 262651_at AT1G14100 FUT8, fucosyltransferase 8 0.313 -0.156
40 252221_at AT3G49830 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.301 0.004
41 246828_at AT5G26350 unknown 0.290 -0.000
42 249425_at AT5G39790 5'-AMP-activated protein kinase-related 0.283 -0.086
43 249144_at AT5G43270 SPL2, squamosa promoter binding protein-like 2 0.282 -0.055
44 256923_at AT3G29635 [HXXXD-type acyl-transferase family protein] 0.281 -0.162
45 264489_at AT1G27370 SPL10, squamosa promoter binding protein-like 10 0.280 -0.048
46 247491_at AT5G61880 [Protein Transporter, Pam16] 0.278 -0.043
47 267309_at AT2G19385 [zinc ion binding] 0.267 0.097
48 251900_at AT3G54430 SRS6, SHI-related sequence 6 0.261 -0.016
49 245139_at AT2G45430 AHL22, AT-hook motif nuclear-localized protein 22 0.258 0.050
50 250779_at AT5G05470 ATEIF2-A2, EIF2 ALPHA, eukaryotic translation initiation factor 2 alpha subunit, EIF2-A2 0.258 -0.012
51 263450_at AT2G31500 CPK24, calcium-dependent protein kinase 24 -1.015 -0.089
52 262282_at AT1G68610 PCR11, PLANT CADMIUM RESISTANCE 11 -0.994 0.125
53 257119_at AT3G20190 PRK4, pollen receptor like kinase 4 -0.899 0.026
54 253318_at AT4G33970 [Leucine-rich repeat (LRR) family protein] -0.895 -0.324
55 246751_at AT5G27870 [Plant invertase/pectin methylesterase inhibitor superfamily] -0.893 0.007
56 259464_at AT1G18990 unknown -0.863 -0.086
57 249852_at AT5G23270 ATSTP11, SUGAR TRANSPORTER 11, STP11, sugar transporter 11 -0.826 -0.118
58 258130_at AT3G24510 [Defensin-like (DEFL) family protein] -0.736 0.101
59 265903_at AT2G25600 AKT6, SPIK, Shaker pollen inward K+ channel -0.710 0.033
60 252571_at AT3G45280 ATSYP72, SYP72, syntaxin of plants 72 -0.707 -0.052
61 255937_at AT1G12610 DDF1, DWARF AND DELAYED FLOWERING 1 -0.683 -0.113
62 246967_at AT5G24860 ATFPF1, ARABIDOPSIS FLOWERING PROMOTING FACTOR 1, FPF1, FLOWERING PROMOTING FACTOR 1 -0.657 0.171
63 247547_at AT5G61360 unknown -0.577 -0.079
64 264139_at AT1G78940 [Protein kinase protein with adenine nucleotide alpha hydrolases-like domain] -0.560 -0.031
65 251293_at AT3G61930 unknown -0.555 0.054
66 254924_at AT4G11330 ATMPK5, MAP kinase 5, MPK5, MAP kinase 5 -0.542 0.079
67 256782_at AT3G13660 [Disease resistance-responsive (dirigent-like protein) family protein] -0.528 -0.155
68 261830_at AT1G10620 AtPERK11, proline-rich extensin-like receptor kinase 11, PERK11, proline-rich extensin-like receptor kinase 11 -0.523 0.033
69 245904_at AT5G11110 ATSPS2F, sucrose phosphate synthase 2F, KNS2, KAONASHI 2, SPS1, SUCROSE PHOSPHATE SYNTHASE 1, SPS2F, sucrose phosphate synthase 2F, SPSA2, sucrose-phosphate synthase A2 -0.502 -0.106
70 245345_at AT4G16640 [Matrixin family protein] -0.502 0.051
71 250997_at AT5G02570 [Histone superfamily protein] -0.499 -0.046
72 260386_at AT1G74010 [Calcium-dependent phosphotriesterase superfamily protein] -0.489 -0.012
73 259351_at AT3G05150 [Major facilitator superfamily protein] -0.471 0.071
74 255232_at AT4G05330 AGD13, ARF-GAP domain 13 -0.461 0.008
75 253332_at AT4G33420 [Peroxidase superfamily protein] -0.453 -0.058
76 249194_at AT5G42490 [ATP binding microtubule motor family protein] -0.447 -0.133
77 250455_at AT5G09980 PROPEP4, elicitor peptide 4 precursor -0.442 0.040
78 260193_at AT1G67640 [Transmembrane amino acid transporter family protein] -0.402 0.078
79 245119_at AT2G41640 [Glycosyltransferase family 61 protein] -0.391 0.173
80 253246_at AT4G34600 unknown -0.375 0.016
81 247780_at AT5G58770 AtcPT4, cPT4, cis-prenyltransferase 4 -0.368 -0.248
82 265470_at AT2G37150 [RING/U-box superfamily protein] -0.367 0.019
83 252940_at AT4G39270 [Leucine-rich repeat protein kinase family protein] -0.358 0.002
84 264261_at AT1G09240 ATNAS3, ARABIDOPSIS THALIANA NICOTIANAMINE SYNTHASE 3, NAS3, nicotianamine synthase 3 -0.358 -0.022
85 252234_at AT3G49780 ATPSK3 (FORMER SYMBOL), ATPSK4, phytosulfokine 4 precursor, PSK4, phytosulfokine 4 precursor -0.353 0.328
86 247530_at AT5G61540 [N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein] -0.348 0.164
87 253458_at AT4G32070 Phox4, Phox4 -0.341 -0.039
88 262640_at AT1G62760 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.329 -0.015
89 261077_at AT1G07430 AIP1, AKT1 interacting protein phosphatase 1, AtAIP1, HAI2, highly ABA-induced PP2C gene 2, HON, HONSU (Korean for abnormal drowsiness) -0.328 -0.032
90 260557_at AT2G43610 [Chitinase family protein] -0.328 0.108
91 262734_at AT1G28640 [GDSL-like Lipase/Acylhydrolase superfamily protein] -0.326 0.034
92 261476_at AT1G14480 [Ankyrin repeat family protein] -0.314 0.005
93 267147_at AT2G38240 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.313 0.200
94 262137_at AT1G77920 TGA7, TGACG sequence-specific binding protein 7 -0.311 -0.240
95 258075_at AT3G25900 ATHMT-1, HMT-1 -0.306 0.153
96 265075_at AT1G55450 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.303 -0.056
97 261401_at AT1G79640 [Protein kinase superfamily protein] -0.303 0.093
98 266544_at AT2G35300 AtLEA4-2, late embryogenesis abundant 4-2, LEA18, late embryogenesis abundant 18, LEA4-2, late embryogenesis abundant 4-2 -0.300 -0.061
99 256539_at AT3G32910 unknown -0.296 0.013