4.0:Information of module
rGRF3x35S:GIF
In comparison with GRX-overexpression seedlings control help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0035966 response to topologically incorrect prot... BP 5.374e-04
GO:0006623 protein targeting to vacuole BP 1.713e-03
GO:0072665 protein localization to vacuole BP 1.713e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009723 response to ethylene BP 1.957e-03
GO:0009790 embryo development BP 2.361e-03
GO:0009873 ethylene-activated signaling pathway BP 3.293e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
rGRF3x35S:GIF		 Log2 signal ratio
GRX-overexpression seedlings control
1 260475_at AT1G11080 scpl31, serine carboxypeptidase-like 31 0.523 0.061
2 246103_at AT5G28640 AN3, ANGUSTIFOLIA 3, ATGIF1, ARABIDOPSIS GRF1-INTERACTING FACTOR 1, GIF, GRF1-INTERACTING FACTOR, GIF1, GRF1-INTERACTING FACTOR 1 0.507 0.004
3 265993_at AT2G24160 [pseudogene] 0.331 -0.050
4 263914_at AT2G36400 AtGRF3, growth-regulating factor 3, GRF3, growth-regulating factor 3 0.264 -0.020
5 262793_at AT1G13110 CYP71B7, cytochrome P450, family 71 subfamily B, polypeptide 7 0.255 -0.011
6 259502_at AT1G15670 KFB01, Kelch repeat F-box 1, KMD2, KISS ME DEADLY 2 0.221 0.019
7 262643_at AT1G62770 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.217 0.044
8 251746_at AT3G56060 [Glucose-methanol-choline (GMC) oxidoreductase family protein] 0.202 0.027
9 257823_at AT3G25190 [Vacuolar iron transporter (VIT) family protein] 0.202 0.006
10 261335_at AT1G44800 SIAR1, Siliques Are Red 1, UMAMIT18, Usually multiple acids move in and out Transporters 18 0.173 0.028
11 251575_at AT3G58120 ATBZIP61, BZIP61 0.169 -0.045
12 253911_at AT4G27300 [S-locus lectin protein kinase family protein] 0.164 0.091
13 266886_at AT2G44745 AtWRKY12, WRKY12, WRKY DNA-binding protein 12 0.164 -0.046
14 250028_at AT5G18130 unknown 0.158 -0.002
15 252133_at AT3G50900 unknown 0.157 0.041
16 265885_at AT2G42330 [GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain] 0.157 0.012
17 246911_at AT5G25810 tny, TINY 0.152 -0.018
18 259743_at AT1G71140 [MATE efflux family protein] 0.150 0.181
19 246562_at AT5G15580 LNG1, LONGIFOLIA1, TRM2, TON1 Recruiting Motif 2 0.146 -0.080
20 254266_at AT4G23130 CRK5, cysteine-rich RLK (RECEPTOR-like protein kinase) 5, RLK6, RECEPTOR-LIKE PROTEIN KINASE 6 0.145 0.052
21 251443_at AT3G59940 KFB50, Kelch repeat F-box 50, KMD4, KISS ME DEADLY 4 0.144 -0.011
22 262009_at AT1G35610 [Cysteine/Histidine-rich C1 domain family protein] 0.141 0.066
23 266786_at AT2G28980 [non-LTR retrotransposon family (LINE), has a 1.3e-43 P-value blast match to GB:NP_038605 L1 repeat, Tf subfamily, member 30 (LINE-element) (Mus musculus)] 0.137 0.055
24 253851_at AT4G28110 AtMYB41, myb domain protein 41, MYB41, myb domain protein 41 0.137 -0.012
25 245250_at AT4G17490 ATERF6, ethylene responsive element binding factor 6, ERF-6-6, ERF6, ethylene responsive element binding factor 6 -0.335 0.028
26 252010_at AT3G52740 unknown -0.289 -0.026
27 260146_at AT1G52770 [Phototropic-responsive NPH3 family protein] -0.251 -0.121
28 248752_at AT5G47600 [HSP20-like chaperones superfamily protein] -0.243 0.072
29 257765_at AT3G23020 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.193 0.014
30 248910_at AT5G45820 CIPK20, CBL-interacting protein kinase 20, PKS18, PROTEIN KINASE 18, SnRK3.6, SNF1-RELATED PROTEIN KINASE 3.6 -0.174 -0.148
31 267592_at AT2G39710 [Eukaryotic aspartyl protease family protein] -0.164 0.026
32 263039_at AT1G23280 [MAK16 protein-related] -0.158 0.030
33 267545_at AT2G32690 ATGRP23, GLYCINE-RICH PROTEIN 23, GRP23, glycine-rich protein 23 -0.158 0.127
34 266529_at AT2G16880 [Pentatricopeptide repeat (PPR) superfamily protein] -0.154 -0.076
35 266662_at AT2G25830 [YebC-related] -0.138 0.024
36 247263_at AT5G64470 TBL12, TRICHOME BIREFRINGENCE-LIKE 12 -0.137 -0.053
37 257270_at AT3G28140 [RNA ligase/cyclic nucleotide phosphodiesterase family protein] -0.132 -0.128
38 249047_at AT5G44410 [FAD-binding Berberine family protein] -0.128 -0.127
39 248917_at AT5G45850 unknown -0.123 0.013
40 264560_at AT1G55820 unknown -0.121 0.033
41 249144_at AT5G43270 SPL2, squamosa promoter binding protein-like 2 -0.120 -0.041
42 266882_at AT2G44670 unknown -0.110 -0.027
43 262972_at AT1G75620 [glyoxal oxidase-related protein] -0.105 0.013
44 254939_at AT4G10800 unknown -0.103 0.104
45 254898_at AT4G11480 CRK32, cysteine-rich RLK (RECEPTOR-like protein kinase) 32 -0.097 0.002
46 259254_at AT3G07630 ADT2, arogenate dehydratase 2, AtADT2, Arabidopsis thaliana arogenate dehydratase 2 -0.095 0.009
47 255346_at AT4G03800 [gypsy-like retrotransposon family, has a 1.5e-125 P-value blast match to GB:AAD19359 polyprotein (gypsy_Ty3-element) (Sorghum bicolor)] -0.094 -0.006