4.0:Information of module
rGRF
In comparison with low CO2 + dark help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009853 photorespiration BP 1.558e-03
GO:0018958 phenol-containing compound metabolic pro... BP 1.936e-03
GO:0043094 cellular metabolic compound salvage BP 2.879e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006722 triterpenoid metabolic process BP 2.923e-02
GO:0010150 leaf senescence BP 2.923e-02
GO:0016104 triterpenoid biosynthetic process BP 2.923e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
rGRF		 Log2 signal ratio
low CO2 + dark
1 261459_at AT1G21100 IGMT1, indole glucosinolate O-methyltransferase 1 0.398 0.435
2 263914_at AT2G36400 AtGRF3, growth-regulating factor 3, GRF3, growth-regulating factor 3 0.298 0.220
3 262793_at AT1G13110 CYP71B7, cytochrome P450, family 71 subfamily B, polypeptide 7 0.189 -0.091
4 252057_at AT3G52480 unknown 0.174 0.422
5 248230_at AT5G53830 [VQ motif-containing protein] 0.170 0.081
6 266088_at AT2G37780 [Cysteine/Histidine-rich C1 domain family protein] 0.153 0.037
7 254592_at AT4G18880 AT-HSFA4A, ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR A4A, HSF A4A, heat shock transcription factor A4A 0.144 0.146
8 263231_at AT1G05680 UGT74E2, Uridine diphosphate glycosyltransferase 74E2 0.138 0.154
9 247723_at AT5G59220 HAI1, highly ABA-induced PP2C gene 1, SAG113, senescence associated gene 113 0.130 0.488
10 251266_at AT3G62320 [Polynucleotidyl transferase, ribonuclease H-like superfamily protein] 0.130 0.026
11 253931_at AT4G26770 [Phosphatidate cytidylyltransferase family protein] 0.127 0.109
12 256699_at AT3G20690 [F-box and associated interaction domains-containing protein] 0.124 0.052
13 255934_at AT1G12740 CYP87A2, cytochrome P450, family 87, subfamily A, polypeptide 2 0.124 0.039
14 250576_at AT5G08250 [Cytochrome P450 superfamily protein] 0.123 0.036
15 252010_at AT3G52740 unknown -0.292 -0.599
16 267282_at AT2G19390 unknown -0.180 -0.144
17 260557_at AT2G43610 [Chitinase family protein] -0.179 -0.069
18 251125_at AT5G01060 BSK10, brassinosteroid-signaling kinase 10 -0.179 -0.013
19 247887_at AT5G57880 ATPRD2, ARABIDOPSIS THALIANA PUTATIVE RECOMBINATION INITIATION DEFECTS 2, MPS1, MULTIPOLAR SPINDLE 1, PRD2, PUTATIVE RECOMBINATION INITIATION DEFECTS 2 -0.162 0.066
20 257207_at AT3G14900 EMB3120, EMBRYO DEFECTIVE 3120 -0.133 -0.423
21 260220_at AT1G74650 ATMYB31, ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 31, ATY13, MYB31, myb domain protein 31 -0.116 0.019
22 257607_at AT3G13880 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.114 -0.082
23 249607_at AT5G37280 [RING/U-box superfamily protein] -0.104 -0.025
24 252899_at AT4G39530 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.089 -0.064
25 256259_at AT3G12460 [Polynucleotidyl transferase, ribonuclease H-like superfamily protein] -0.089 0.075
26 263039_at AT1G23280 [MAK16 protein-related] -0.087 -0.271
27 257642_at AT3G25710 ATAIG1, BHLH32, basic helix-loop-helix 32, TMO5, TARGET OF MONOPTEROS 5 -0.085 0.064