4.0:Information of module
miR396b overexpressor
In comparison with sid2-1 cold help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006413 translational initiation BP 1.819e-04
GO:0015698 inorganic anion transport BP 2.664e-04
GO:0006820 anion transport BP 7.994e-04
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0007051 spindle organization BP 5.176e-09
GO:0000226 microtubule cytoskeleton organization BP 7.106e-09
GO:1903047 mitotic cell cycle process BP 1.172e-08
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
miR396b overexpressor		 Log2 signal ratio
sid2-1 cold
1 265155_at AT1G30990 [Polyketide cyclase/dehydrase and lipid transport superfamily protein] 1.099 -0.019
2 260560_at AT2G43590 [Chitinase family protein] 0.369 -0.071
3 255524_at AT4G02330 AtPME41, ATPMEPCRB, PME41, pectin methylesterase 41 0.355 -0.217
4 259765_at AT1G64370 unknown 0.248 0.019
5 260558_at AT2G43600 [Chitinase family protein] 0.226 -0.087
6 266322_at AT2G46690 SAUR32, SMALL AUXIN UPREGULATED RNA 32 0.225 0.054
7 258184_at AT3G21510 AHP1, histidine-containing phosphotransmitter 1 0.216 -0.054
8 264466_at AT1G10380 [Putative membrane lipoprotein] 0.215 -0.046
9 254174_at AT4G24120 ATYSL1, YELLOW STRIPE LIKE 1, YSL1, YELLOW STRIPE like 1 0.211 -0.080
10 248227_at AT5G53820 [Late embryogenesis abundant protein (LEA) family protein] 0.204 -0.043
11 264773_at AT1G22900 [Disease resistance-responsive (dirigent-like protein) family protein] 0.203 0.046
12 247109_at AT5G65870 ATPSK5, phytosulfokine 5 precursor, PSK5, PSK5, phytosulfokine 5 precursor 0.192 0.071
13 262396_at AT1G49470 unknown 0.187 -0.053
14 248004_at AT5G56230 PRA1.G2, prenylated RAB acceptor 1.G2 0.164 -0.026
15 247440_at AT5G62680 AtNPF2.11, GTR2, GLUCOSINOLATE TRANSPORTER-2, NPF2.11, NRT1/ PTR family 2.11 0.161 -0.004
16 263406_at AT2G04160 AIR3, AUXIN-INDUCED IN ROOT CULTURES 3 0.158 0.010
17 246464_at AT5G16980 [Zinc-binding dehydrogenase family protein] 0.158 0.042
18 265926_at AT2G18600 [Ubiquitin-conjugating enzyme family protein] 0.157 -0.045
19 249051_at AT5G44390 [FAD-binding Berberine family protein] 0.155 -0.143
20 255646_at AT4G00890 [proline-rich family protein] 0.138 0.017
21 261032_at AT1G17430 [alpha/beta-Hydrolases superfamily protein] 0.138 -0.049
22 247874_at AT5G57710 SMAX1, SUPPRESSOR OF MAX2 1 0.137 -0.067
23 259546_at AT1G35350 [EXS (ERD1/XPR1/SYG1) family protein] 0.131 -0.071
24 261599_at AT1G49700 unknown 0.129 0.020
25 264525_at AT1G10060 ATBCAT-1, branched-chain amino acid transaminase 1, BCAT-1, branched-chain amino acid transaminase 1, BCAT1, branched-chain amino acid transferase 1 0.129 0.053
26 245451_at AT4G16890 BAL, BALL, SNC1, SUPPRESSOR OF NPR1-1, CONSTITUTIVE 1 0.128 -0.045
27 253065_at AT4G37740 AtGRF2, growth-regulating factor 2, GRF2, growth-regulating factor 2 -0.455 0.131
28 263914_at AT2G36400 AtGRF3, growth-regulating factor 3, GRF3, growth-regulating factor 3 -0.297 0.145
29 248335_at AT5G52450 [MATE efflux family protein] -0.295 -0.013
30 248372_at AT5G51850 TRM24, TON1 Recruiting Motif 24 -0.295 0.132
31 254037_at AT4G25760 ATGDU2, glutamine dumper 2, GDU2, glutamine dumper 2 -0.230 0.135
32 248197_at AT5G54190 PORA, protochlorophyllide oxidoreductase A -0.228 0.091
33 257642_at AT3G25710 ATAIG1, BHLH32, basic helix-loop-helix 32, TMO5, TARGET OF MONOPTEROS 5 -0.221 0.123
34 252237_at AT3G49950 [GRAS family transcription factor] -0.208 -0.085
35 255851_at AT1G67040 TRM22, TON1 Recruiting Motif 22 -0.205 0.127
36 266825_at AT2G22890 [Kua-ubiquitin conjugating enzyme hybrid localisation domain] -0.199 0.105
37 260784_at AT1G06180 ATMYB13, myb domain protein 13, ATMYBLFGN, MYB13, myb domain protein 13 -0.189 0.104
38 260563_at AT2G43840 UGT74F1, UDP-glycosyltransferase 74 F1 -0.185 0.061
39 250566_at AT5G08070 TCP17, TCP domain protein 17 -0.174 0.115
40 261384_at AT1G05440 [C-8 sterol isomerases] -0.173 0.154
41 249809_at AT5G23910 [ATP binding microtubule motor family protein] -0.167 0.070
42 250389_at AT5G11320 AtYUC4, YUC4, YUCCA4 -0.163 -0.061
43 262197_at AT1G53910 RAP2.12, related to AP2 12 -0.161 0.045
44 254015_at AT4G26140 BGAL12, beta-galactosidase 12 -0.160 -0.023
45 254933_at AT4G11130 RDR2, RNA-dependent RNA polymerase 2, SMD1, SILENCING MOVEMENT DEFICIENT 1 -0.159 0.055
46 267389_at AT2G44460 BGLU28, beta glucosidase 28 -0.149 -0.107
47 267529_at AT2G45490 AtAUR3, ataurora3, AUR3, ataurora3 -0.143 -0.047
48 261027_at AT1G01340 ACBK1, ATCNGC10, cyclic nucleotide gated channel 10, CNGC10, cyclic nucleotide gated channel 10 -0.132 -0.433
49 259122_at AT3G02210 COBL1, COBRA-like protein 1 precursor -0.130 0.034
50 257923_at AT3G23160 unknown -0.124 0.015
51 259686_at AT1G63100 [GRAS family transcription factor] -0.123 0.100