4.0:Information of module
vte2 leaves 48h LT
In comparison with seed germinating in countinuous light 24h SL help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010035 response to inorganic substance BP 3.100e-05
GO:0001101 response to acid chemical BP 3.673e-05
GO:0009414 response to water deprivation BP 1.017e-04
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0044272 sulfur compound biosynthetic process BP 2.089e-24
GO:0006790 sulfur compound metabolic process BP 2.982e-24
GO:0044281 small molecule metabolic process BP 7.619e-22
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
vte2 leaves 48h LT		 Log2 signal ratio
seed germinating in countinuous light 24h SL
1 261004_at AT1G26450 [Carbohydrate-binding X8 domain superfamily protein] 0.664 -0.588
2 260438_at AT1G68290 ENDO2, endonuclease 2 0.596 -0.333
3 258377_at AT3G17690 ATCNGC19, CYCLIC NUCLEOTIDE-GATED CHANNEL 19, CNGC19, cyclic nucleotide gated channel 19 0.551 -0.565
4 252938_at AT4G39190 unknown 0.515 -0.367
5 262517_at AT1G17180 ATGSTU25, glutathione S-transferase TAU 25, GSTU25, glutathione S-transferase TAU 25 0.499 0.292
6 258122_at AT3G14570 ATGSL04, glucan synthase-like 4, atgsl4, gsl04, GSL04, glucan synthase-like 4 0.467 0.113
7 254258_at AT4G23410 TET5, tetraspanin5 0.431 -0.528
8 260225_at AT1G74590 ATGSTU10, GLUTATHIONE S-TRANSFERASE TAU 10, GSTU10, glutathione S-transferase TAU 10 0.430 -0.217
9 250211_at AT5G13880 unknown 0.424 -1.000
10 248777_at AT5G47920 unknown 0.418 -0.435
11 254490_at AT4G20320 [CTP synthase family protein] 0.393 -0.416
12 250646_at AT5G06720 ATPA2, peroxidase 2, AtPRX53, PA2, peroxidase 2, PRX53, peroxidase 53 0.391 -0.315
13 262229_at AT1G68620 [alpha/beta-Hydrolases superfamily protein] 0.390 -1.057
14 260389_at AT1G74055 unknown 0.382 -0.564
15 251770_at AT3G55970 ATJRG21, JRG21, jasmonate-regulated gene 21 0.359 -1.079
16 246228_at AT4G36430 [Peroxidase superfamily protein] 0.356 0.219
17 257203_at AT3G23730 XTH16, xyloglucan endotransglucosylase/hydrolase 16 0.351 1.057
18 264635_at AT1G65500 unknown 0.333 0.205
19 245882_at AT5G09470 DIC3, dicarboxylate carrier 3 0.332 -0.172
20 252289_at AT3G49130 [SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein] 0.311 -0.560
21 257950_at AT3G21780 UGT71B6, UDP-glucosyl transferase 71B6 0.300 0.012
22 245982_at AT5G13170 AtSWEET15, SAG29, senescence-associated gene 29, SWEET15 0.296 0.589
23 260277_at AT1G80520 [Sterile alpha motif (SAM) domain-containing protein] 0.276 -0.144
24 247800_at AT5G58570 unknown 0.258 0.205
25 256781_at AT3G13650 [Disease resistance-responsive (dirigent-like protein) family protein] 0.257 0.580
26 267101_at AT2G41480 AtPRX25, PRX25, peroxidase 25 0.256 -0.232
27 249860_at AT5G22860 [Serine carboxypeptidase S28 family protein] 0.249 -0.704
28 252997_at AT4G38400 ATEXLA2, expansin-like A2, ATEXPL2, ATHEXP BETA 2.2, EXLA2, expansin-like A2, EXPL2, EXPANSIN L2 0.245 0.980
29 251499_at AT3G59100 ATGSL11, glucan synthase-like 11, gsl11, GSL11, glucan synthase-like 11 0.239 0.690
30 265197_at AT2G36750 UGT73C1, UDP-glucosyl transferase 73C1 0.236 -0.663
31 252320_at AT3G48580 XTH11, xyloglucan endotransglucosylase/hydrolase 11 0.234 -1.007
32 245262_at AT4G16563 [Eukaryotic aspartyl protease family protein] 0.232 -0.046
33 249438_at AT5G40010 AATP1, AAA-ATPase 1, ASD, ATPase-in-Seed-Development 0.232 -1.156
34 252984_at AT4G37990 ATCAD8, ARABIDOPSIS THALIANA CINNAMYL-ALCOHOL DEHYDROGENASE 8, CAD-B2, CINNAMYL-ALCOHOL DEHYDROGENASE B2, ELI3, ELICITOR-ACTIVATED GENE 3, ELI3-2, elicitor-activated gene 3-2 0.232 0.527
35 254231_at AT4G23810 ATWRKY53, WRKY53 0.226 -0.449
36 256647_at AT3G13610 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 0.225 -0.311
37 249574_at AT5G37660 PDLP7, plasmodesmata-located protein 7 0.225 -0.315
38 260386_at AT1G74010 [Calcium-dependent phosphotriesterase superfamily protein] 0.221 -0.391
39 263391_at AT2G11810 ATMGD3, MGD3, MONOGALACTOSYL DIACYLGLYCEROL SYNTHASE 3, MGDC, monogalactosyldiacylglycerol synthase type C 0.214 -0.412
40 245384_at AT4G16790 [hydroxyproline-rich glycoprotein family protein] 0.213 -0.215
41 245325_at AT4G14130 XTH15, xyloglucan endotransglucosylase/hydrolase 15, XTR7, xyloglucan endotransglycosylase 7 0.209 0.440
42 253050_at AT4G37450 AGP18, arabinogalactan protein 18, ATAGP18 0.206 0.119
43 257735_at AT3G27400 [Pectin lyase-like superfamily protein] 0.206 1.279
44 257697_at AT3G12700 NANA, NANA 0.205 0.984
45 247957_at AT5G57050 ABI2, ABA INSENSITIVE 2, AtABI2 0.201 -0.072
46 267345_at AT2G44240 unknown 0.199 -1.273
47 250302_at AT5G11920 AtcwINV6, 6-&1-fructan exohydrolase, cwINV6, 6-&1-fructan exohydrolase 0.196 -1.092
48 261117_at AT1G75310 AUL1, auxilin-like 1 0.195 -0.492
49 267226_at AT2G44010 unknown 0.194 -0.285
50 252557_at AT3G45960 ATEXLA3, expansin-like A3, ATEXPL3, ATHEXP BETA 2.3, EXLA3, expansin-like A3, EXPL3 0.192 -1.250
51 257927_at AT3G23240 ATERF1, ETHYLENE RESPONSE FACTOR 1, ERF1, ethylene response factor 1 0.191 0.205
52 266693_at AT2G19800 MIOX2, myo-inositol oxygenase 2 0.189 1.118
53 248812_at AT5G47330 [alpha/beta-Hydrolases superfamily protein] 0.188 0.968
54 261431_at AT1G18710 AtMYB47, myb domain protein 47, MYB47, myb domain protein 47 0.187 -1.022
55 249721_at AT5G24655 LSU4, RESPONSE TO LOW SULFUR 4 0.182 0.428
56 263734_at AT1G60030 ATNAT7, ARABIDOPSIS NUCLEOBASE-ASCORBATE TRANSPORTER 7, NAT7, nucleobase-ascorbate transporter 7 0.180 -1.194
57 255524_at AT4G02330 AtPME41, ATPMEPCRB, PME41, pectin methylesterase 41 0.176 0.824
58 246922_at AT5G25110 CIPK25, CBL-interacting protein kinase 25, SnRK3.25, SNF1-RELATED PROTEIN KINASE 3.25 0.170 0.308
59 249867_at AT5G23020 IMS2, 2-isopropylmalate synthase 2, MAM-L, METHYLTHIOALKYMALATE SYNTHASE-LIKE, MAM3 -0.823 -0.523
60 255127_at AT4G08300 UMAMIT17, Usually multiple acids move in and out Transporters 17 -0.616 -0.882
61 266938_at AT2G18950 ATHPT, HOMOGENTISATE PHYTYLTRANSFERASE, HPT1, homogentisate phytyltransferase 1, TPT1, VTE2, VITAMIN E 2 -0.605 0.597
62 261576_at AT1G01070 UMAMIT28, Usually multiple acids move in and out Transporters 28 -0.432 -0.120
63 266656_at AT2G25900 ATCTH, ATTZF1, A. THALIANA TANDEM ZINC FINGER PROTEIN 1 -0.357 -0.346
64 246522_at AT5G15830 AtbZIP3, basic leucine-zipper 3, bZIP3, basic leucine-zipper 3 -0.356 -0.317
65 249800_at AT5G23660 AtSWEET12, MTN3, homolog of Medicago truncatula MTN3, SWEET12 -0.353 0.330
66 258322_at AT3G22740 HMT3, homocysteine S-methyltransferase 3 -0.351 -0.412
67 249862_at AT5G22920 [CHY-type/CTCHY-type/RING-type Zinc finger protein] -0.349 -0.030
68 253061_at AT4G37610 BT5, BTB and TAZ domain protein 5 -0.333 0.056
69 259116_at AT3G01350 [Major facilitator superfamily protein] -0.327 -1.299
70 252011_at AT3G52720 ACA1, alpha carbonic anhydrase 1, ATACA1, A. THALIANA ALPHA CARBONIC ANHYDRASE 1, CAH1, CARBONIC ANHYDRASE 1 -0.327 -0.458
71 247600_at AT5G60890 ATMYB34, ATR1, ALTERED TRYPTOPHAN REGULATION 1, MYB34, myb domain protein 34 -0.307 0.247
72 250598_at AT5G07690 ATMYB29, myb domain protein 29, MYB29, myb domain protein 29, PMG2, PRODUCTION OF METHIONINE-DERIVED GLUCOSINOLATE 2 -0.304 -0.875
73 253305_at AT4G33666 unknown -0.300 -0.664
74 265962_at AT2G37460 UMAMIT12, Usually multiple acids move in and out Transporters 12 -0.296 0.435
75 258402_at AT3G15450 [Aluminium induced protein with YGL and LRDR motifs] -0.283 -0.203
76 253657_at AT4G30110 ATHMA2, ARABIDOPSIS HEAVY METAL ATPASE 2, HMA2, heavy metal atpase 2 -0.281 -1.142
77 255129_at AT4G08290 UMAMIT20, Usually multiple acids move in and out Transporters 20 -0.280 1.056
78 245690_at AT5G04230 ATPAL3, PAL3, phenyl alanine ammonia-lyase 3 -0.275 -0.406
79 262730_at AT1G16390 ATOCT3, organic cation/carnitine transporter 3, OCT3, organic cation/carnitine transporter 3 -0.271 0.687
80 259871_at AT1G76800 [Vacuolar iron transporter (VIT) family protein] -0.265 0.131
81 260693_at AT1G32450 AtNPF7.3, NPF7.3, NRT1/ PTR family 7.3, NRT1.5, nitrate transporter 1.5 -0.262 -0.969
82 267595_at AT2G32990 AtGH9B8, glycosyl hydrolase 9B8, GH9B8, glycosyl hydrolase 9B8 -0.260 0.207
83 262751_at AT1G16310 [Cation efflux family protein] -0.259 -0.575
84 259839_at AT1G52190 AtNPF1.2, NPF1.2, NRT1/ PTR family 1.2, NRT1.11, nitrate transporter 1.11 -0.257 0.640
85 252607_at AT3G44990 AtXTH31, ATXTR8, XTH31, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 31, XTR8, xyloglucan endo-transglycosylase-related 8 -0.253 0.919
86 258225_at AT3G15630 unknown -0.249 0.342
87 264052_at AT2G22330 CYP79B3, cytochrome P450, family 79, subfamily B, polypeptide 3 -0.245 -0.268
88 262212_at AT1G74890 ARR15, response regulator 15 -0.243 -0.848
89 265121_at AT1G62560 FMO GS-OX3, flavin-monooxygenase glucosinolate S-oxygenase 3 -0.243 -0.195
90 262646_at AT1G62800 ASP4, aspartate aminotransferase 4 -0.240 -0.107
91 259680_at AT1G77690 LAX3, like AUX1 3 -0.238 0.283
92 257793_at AT3G26960 [Pollen Ole e 1 allergen and extensin family protein] -0.235 -0.334
93 259366_at AT1G13280 AOC4, allene oxide cyclase 4 -0.233 0.419
94 250968_at AT5G02890 [HXXXD-type acyl-transferase family protein] -0.233 -0.410
95 248683_at AT5G48490 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] -0.232 -0.630
96 252534_at AT3G46130 ATMYB48, myb domain protein 48, ATMYB48-1, ATMYB48-2, ATMYB48-3, MYB48, myb domain protein 48 -0.232 -0.629
97 255302_at AT4G04830 ATMSRB5, methionine sulfoxide reductase B5, MSRB5, methionine sulfoxide reductase B5 -0.231 0.223
98 255578_at AT4G01450 UMAMIT30, Usually multiple acids move in and out Transporters 30 -0.228 1.024
99 266277_at AT2G29310 [NAD(P)-binding Rossmann-fold superfamily protein] -0.227 0.464
100 258239_at AT3G27690 LHCB2, LIGHT-HARVESTING CHLOROPHYLL B-BINDING 2, LHCB2.3, photosystem II light harvesting complex gene 2.3, LHCB2.4 -0.226 -0.183
101 256299_at AT1G69530 AT-EXP1, ATEXP1, ATEXPA1, expansin A1, ATHEXP ALPHA 1.2, EXP1, EXPANSIN 1, EXPA1, expansin A1 -0.222 0.346
102 259373_at AT1G69160 unknown -0.220 -0.640
103 260770_at AT1G49200 [RING/U-box superfamily protein] -0.218 -1.192
104 245090_at AT2G40900 UMAMIT11, Usually multiple acids move in and out Transporters 11 -0.215 -0.584
105 257543_at AT3G28960 [Transmembrane amino acid transporter family protein] -0.213 -0.980
106 246566_at AT5G14940 [Major facilitator superfamily protein] -0.211 -0.776
107 266989_at AT2G39330 JAL23, jacalin-related lectin 23 -0.211 -0.362
108 259723_at AT1G60960 ATIRT3, IRON REGULATED TRANSPORTER 3, IRT3, iron regulated transporter 3 -0.209 0.432
109 254301_at AT4G22790 [MATE efflux family protein] -0.206 -1.202
110 267158_at AT2G37640 ATEXP3, EXPANSIN 3, ATEXPA3, ARABIDOPSIS THALIANA EXPANSIN A3, ATHEXP ALPHA 1.9, EXP3 -0.206 0.620
111 267544_at AT2G32720 ATCB5-B, ARABIDOPSIS CYTOCHROME B5 ISOFORM B, B5 #4, CB5-B, cytochrome B5 isoform B, CYTB5-D -0.206 0.278
112 251856_at AT3G54720 AMP1, ALTERED MERISTEM PROGRAM 1, AtAMP1, COP2, CONSTITUTIVE MORPHOGENESIS 2, HPT, HAUPTLING, MFO1, Multifolia, PT, PRIMORDIA TIMING -0.202 -0.048
113 262196_at AT1G77870 MUB5, membrane-anchored ubiquitin-fold protein 5 precursor -0.201 -0.983
114 258196_at AT3G13980 unknown -0.199 -0.759
115 258727_at AT3G11930 [Adenine nucleotide alpha hydrolases-like superfamily protein] -0.197 0.725