4.0:Information of module
vte2 leaves 0h LT
In comparison with whole roots 140 mM NaCl 30 minutes help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006354 DNA-templated transcription, elongation BP 1.358e-16
GO:0015979 photosynthesis BP 7.597e-08
GO:0006091 generation of precursor metabolites and ... BP 9.704e-07
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0080129 proteasome core complex assembly BP 2.139e-03
GO:0035966 response to topologically incorrect prot... BP 2.145e-03
GO:0009853 photorespiration BP 2.463e-03
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
vte2 leaves 0h LT		 Log2 signal ratio
whole roots 140 mM NaCl 30 minutes
1 264958_at AT1G76960 unknown 0.407 -0.039
2 244934_at ATCG01080 NDHG 0.344 -0.038
3 260217_at AT1G74600 OTP87, organelle transcript processing 87 0.240 0.045
4 260015_at AT1G67980 CCOAMT, caffeoyl-CoA 3-O-methyltransferase 0.225 0.032
5 244933_at ATCG01070 NDHE 0.217 -0.038
6 263283_at AT2G36090 [F-box family protein] 0.206 -0.153
7 245011_at ATCG00430 PSBG, photosystem II reaction center protein G 0.201 -0.111
8 247674_at AT5G59930 [Cysteine/Histidine-rich C1 domain family protein] 0.201 -0.019
9 252090_at AT3G52130 [Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein] 0.185 -0.043
10 244950_at ATMG00160 COX2, cytochrome oxidase 2 0.176 0.023
11 244997_at ATCG00170 RPOC2 0.173 -0.043
12 252822_at AT4G39955 [alpha/beta-Hydrolases superfamily protein] -0.260 0.053
13 255824_at AT2G40530 unknown -0.252 0.065
14 259832_at AT1G69580 [Homeodomain-like superfamily protein] -0.218 0.089
15 253809_at AT4G28320 AtMAN5, MAN5, endo-beta-mannase 5 -0.210 -0.050
16 245755_at AT1G35210 unknown -0.202 0.165
17 264756_at AT1G61370 [S-locus lectin protein kinase family protein] -0.194 0.060
18 261335_at AT1G44800 SIAR1, Siliques Are Red 1, UMAMIT18, Usually multiple acids move in and out Transporters 18 -0.187 0.008
19 260053_at AT1G78120 TPR12, tetratricopeptide repeat 12 -0.180 0.110
20 255893_at AT1G17960 [Threonyl-tRNA synthetase] -0.160 0.051
21 247707_at AT5G59450 [GRAS family transcription factor] -0.151 0.073