4.0:Information of module
GO5; harvested 8h continiously maintained in high CO2;
In comparison with cat2-long-day 2d help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0007568 aging BP 2.173e-03
GO:0009582 detection of abiotic stimulus BP 2.725e-03
GO:0080147 root hair cell development BP 4.648e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0009808 lignin metabolic process BP 7.638e-04
GO:0045036 protein targeting to chloroplast BP 7.822e-03
GO:0072596 establishment of protein localization to... BP 7.822e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
GO5; harvested 8h continiously maintained in high CO2;		 Log2 signal ratio
cat2-long-day 2d
1 251772_at AT3G55920 [Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein] 1.007 0.813
2 256940_at AT3G30720 QQS, QUA-QUINE STARCH 0.330 0.053
3 252167_at AT3G50560 [NAD(P)-binding Rossmann-fold superfamily protein] 0.186 0.041
4 261727_at AT1G76090 SMT3, sterol methyltransferase 3 0.180 0.151
5 247189_at AT5G65390 AGP7, arabinogalactan protein 7 0.151 0.117
6 248496_at AT5G50790 AtSWEET10, SWEET10 0.146 0.004
7 255015_at AT4G09980 EMB1691, EMBRYO DEFECTIVE 1691 0.137 0.064
8 261851_at AT1G50460 ATHKL1, HKL1, hexokinase-like 1 0.134 -0.045
9 246435_at AT5G17460 unknown 0.132 0.022
10 252160_at AT3G50570 [hydroxyproline-rich glycoprotein family protein] 0.121 0.028
11 246034_at AT5G08350 [GRAM domain-containing protein / ABA-responsive protein-related] 0.114 0.061
12 247707_at AT5G59450 [GRAS family transcription factor] 0.108 -0.080
13 245794_at AT1G32170 XTH30, xyloglucan endotransglucosylase/hydrolase 30, XTR4, xyloglucan endotransglycosylase 4 0.104 0.032
14 252257_at AT3G49440 [F-box associated ubiquitination effector family protein] 0.102 0.055
15 266640_at AT2G35585 unknown 0.099 0.036
16 259698_at AT1G68930 [pentatricopeptide (PPR) repeat-containing protein] 0.096 0.078
17 263726_at AT2G13610 ABCG5, ATP-binding cassette G5 0.094 0.142
18 251743_at AT3G55890 [Yippee family putative zinc-binding protein] -0.281 -0.517
19 265588_at AT2G19970 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.204 0.012
20 254390_at AT4G21940 CPK15, calcium-dependent protein kinase 15 -0.148 -0.129
21 252746_at AT3G43190 ATSUS4, ARABIDOPSIS THALIANA SUCROSE SYNTHASE 4, SUS4, sucrose synthase 4 -0.145 -0.002
22 266549_at AT2G35150 EXL7, EXORDIUM LIKE 7 -0.122 -0.026
23 257688_at AT3G12810 chr13, PIE1, PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1, SRCAP -0.119 -0.006
24 263792_at AT2G24660 [copia-like retrotransposon family, has a 1.7e-166 P-value blast match to GB:BAA78424 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)gi|4996363|dbj|BAA78424.1| polyprotein (AtRE2) (Arabidopsis thaliana) (Ty1_Copia-element)] -0.116 0.019
25 267150_at AT2G23510 SDT, spermidine disinapoyl acyltransferase -0.114 -0.028
26 252437_at AT3G47380 [Plant invertase/pectin methylesterase inhibitor superfamily protein] -0.110 0.028
27 255768_at AT1G16705 [p300/CBP acetyltransferase-related protein-related] -0.110 -0.058
28 263258_at AT1G10540 ATNAT8, NAT8, nucleobase-ascorbate transporter 8 -0.108 -0.015
29 245108_at AT2G41510 ATCKX1, CYTOKININ OXIDASE/DEHYDROGENASE 1, CKX1, cytokinin oxidase/dehydrogenase 1 -0.107 0.015
30 246235_at AT4G36830 HOS3-1 -0.105 -0.025
31 260955_at AT1G06000 [UDP-Glycosyltransferase superfamily protein] -0.091 -0.121
32 259910_at AT1G72700 [ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein] -0.089 -0.095
33 246024_at AT5G21130 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] -0.079 -0.027