4.0:Information of module
fls1-3
In comparison with root columella root cap 40 mM NaCl help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0009694 jasmonic acid metabolic process BP 2.268e-32
GO:0009695 jasmonic acid biosynthetic process BP 3.687e-23
GO:0009611 response to wounding BP 1.574e-21
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0010468 regulation of gene expression BP 9.544e-04
GO:0009629 response to gravity BP 2.131e-03
GO:0060255 regulation of macromolecule metabolic pr... BP 2.559e-03
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
fls1-3		 Log2 signal ratio
root columella root cap 40 mM NaCl
1 264415_at AT1G43160 RAP2.6, related to AP2 6 0.922 0.721
2 264886_at AT1G61120 GES, GERANYLLINALOOL SYNTHASE, TPS04, terpene synthase 04, TPS4, TERPENE SYNTHASE 4 0.918 -0.057
3 247478_at AT5G62360 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.707 0.132
4 251950_at AT3G53600 [C2H2-type zinc finger family protein] 0.600 0.275
5 253628_at AT4G30280 ATXTH18, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 18, XTH18, xyloglucan endotransglucosylase/hydrolase 18 0.589 0.017
6 257835_at AT3G25180 CYP82G1, cytochrome P450, family 82, subfamily G, polypeptide 1 0.547 0.031
7 250560_at AT5G08020 ATRPA70B, ARABIDOPSIS THALIANA RPA70-KDA SUBUNIT B, RPA70B, RPA70-kDa subunit B 0.510 -0.186
8 253104_at AT4G36010 [Pathogenesis-related thaumatin superfamily protein] 0.495 0.301
9 267411_at AT2G34930 [disease resistance family protein / LRR family protein] 0.483 0.210
10 250292_at AT5G13220 JAS1, JASMONATE-ASSOCIATED 1, JAZ10, jasmonate-zim-domain protein 10, TIFY9, TIFY DOMAIN PROTEIN 9 0.482 0.174
11 249527_at AT5G38710 [Methylenetetrahydrofolate reductase family protein] 0.455 0.592
12 262756_at AT1G16370 ATOCT6, ARABIDOPSIS THALIANA ORGANIC CATION/CARNITINE TRANSPORTER 6, OCT6, organic cation/carnitine transporter 6 0.454 -0.026
13 247030_at AT5G67210 IRX15-L, IRX15-LIKE 0.438 0.216
14 251494_at AT3G59350 [Protein kinase superfamily protein] 0.435 0.186
15 246222_at AT4G36900 DEAR4, DREB AND EAR MOTIF PROTEIN 4, RAP2.10, related to AP2 10 0.432 0.519
16 252265_at AT3G49620 DIN11, DARK INDUCIBLE 11 0.403 0.634
17 266456_at AT2G22770 NAI1 0.403 -0.126
18 250777_at AT5G05440 PYL5, PYRABACTIN RESISTANCE 1-LIKE 5, RCAR8, regulatory component of ABA receptor 8 0.402 0.034
19 248359_at AT5G52410 unknown 0.401 0.523
20 259595_at AT1G28050 BBX13, B-box domain protein 13 0.394 0.029
21 250483_at AT5G10300 AtHNL, ATMES5, ARABIDOPSIS THALIANA METHYL ESTERASE 5, HNL, HYDROXYNITRILE LYASE, MES5, methyl esterase 5 0.393 0.104
22 261431_at AT1G18710 AtMYB47, myb domain protein 47, MYB47, myb domain protein 47 0.393 0.255
23 264389_at AT1G11960 [ERD (early-responsive to dehydration stress) family protein] 0.390 0.125
24 253799_at AT4G28140 [Integrase-type DNA-binding superfamily protein] 0.377 0.538
25 246432_at AT5G17490 AtRGL3, RGL3, RGA-like protein 3 0.374 0.039
26 254996_at AT4G10390 [Protein kinase superfamily protein] 0.373 0.096
27 263918_at AT2G36590 ATPROT3, PROLINE TRANSPORTER 3, ProT3, proline transporter 3 0.370 0.173
28 249087_at AT5G44210 ATERF-9, ERF DOMAIN PROTEIN- 9, ATERF9, ERF DOMAIN PROTEIN 9, ERF9, erf domain protein 9 0.369 0.402
29 249071_at AT5G44050 [MATE efflux family protein] 0.359 0.084
30 252563_at AT3G45970 ATEXLA1, expansin-like A1, ATEXPL1, ATHEXP BETA 2.1, EXLA1, expansin-like A1, EXPL1, EXPANSIN L1 0.358 0.108
31 247177_at AT5G65300 unknown 0.357 -0.014
32 248205_at AT5G54300 unknown 0.352 0.113
33 261037_at AT1G17420 ATLOX3, Arabidopsis thaliana lipoxygenase 3, LOX3, lipoxygenase 3 0.349 0.247
34 253485_at AT4G31800 ATWRKY18, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 18, WRKY18, WRKY DNA-binding protein 18 0.346 0.285
35 247208_at AT5G64870 [SPFH/Band 7/PHB domain-containing membrane-associated protein family] 0.340 0.018
36 250793_at AT5G05600 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.336 0.189
37 266419_at AT2G38760 ANN3, ANNEXIN 3, ANNAT3, annexin 3, AtANN3 0.327 0.046
38 262159_at AT1G52720 unknown 0.326 -0.034
39 253707_at AT4G29200 [Beta-galactosidase related protein] -1.098 -0.072
40 256940_at AT3G30720 QQS, QUA-QUINE STARCH -0.632 -0.010
41 265665_at AT2G27420 [Cysteine proteinases superfamily protein] -0.602 0.046
42 248799_at AT5G47230 ATERF-5, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR- 5, ATERF5, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 5, AtMACD1, ERF102, ERF5, ethylene responsive element binding factor 5 -0.590 -0.015
43 262211_at AT1G74930 ORA47 -0.461 -0.397
44 247543_at AT5G61600 ERF104, ethylene response factor 104 -0.444 -0.208
45 248759_at AT5G47610 [RING/U-box superfamily protein] -0.423 -0.067
46 249191_at AT5G42760 [Leucine carboxyl methyltransferase] -0.422 -0.062
47 258497_at AT3G02380 ATCOL2, CONSTANS-LIKE 2, BBX3, B-box domain protein 3, COL2, CONSTANS-like 2 -0.413 -0.089
48 257057_at AT3G15310 unknown -0.405 -0.117
49 249752_at AT5G24660 LSU2, RESPONSE TO LOW SULFUR 2 -0.389 0.170
50 251170_at AT3G63260 ATMRK1 -0.387 0.003
51 254231_at AT4G23810 ATWRKY53, WRKY53 -0.380 -0.477
52 251169_at AT3G63210 MARD1, MEDIATOR OF ABA-REGULATED DORMANCY 1 -0.380 -0.231
53 252534_at AT3G46130 ATMYB48, myb domain protein 48, ATMYB48-1, ATMYB48-2, ATMYB48-3, MYB48, myb domain protein 48 -0.376 -0.145
54 256379_at AT1G66840 PMI2, plastid movement impaired 2, WEB2, WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 2 -0.324 0.048
55 257272_at AT3G28130 UMAMIT44, Usually multiple acids move in and out Transporters 44 -0.308 -0.025
56 249047_at AT5G44410 [FAD-binding Berberine family protein] -0.299 0.027
57 248964_at AT5G45340 CYP707A3, cytochrome P450, family 707, subfamily A, polypeptide 3 -0.295 -0.092
58 261177_at AT1G04770 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.292 0.151
59 251713_at AT3G56080 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.290 -0.009
60 263739_at AT2G21320 BBX18, B-box domain protein 18 -0.273 -0.061
61 246071_at AT5G20150 ATSPX1, ARABIDOPSIS THALIANA SPX DOMAIN GENE 1, SPX1, SPX domain gene 1 -0.272 0.253
62 261663_at AT1G18330 EPR1, EARLY-PHYTOCHROME-RESPONSIVE1, RVE7, REVEILLE 7 -0.268 -0.026
63 265573_at AT2G28200 [C2H2-type zinc finger family protein] -0.268 -0.119
64 254145_at AT4G24700 unknown -0.265 -0.046
65 262883_at AT1G64780 AMT1;2, ammonium transporter 1;2, ATAMT1;2, ammonium transporter 1;2 -0.264 0.180
66 262811_at AT1G11700 unknown -0.261 0.169
67 265726_at AT2G32010 CVL1, CVP2 like 1 -0.243 -0.069
68 256999_at AT3G14200 [Chaperone DnaJ-domain superfamily protein] -0.235 0.071
69 246231_at AT4G37080 unknown -0.235 -0.124
70 262281_at AT1G68570 AtNPF3.1, NPF3.1, NRT1/ PTR family 3.1 -0.226 0.025
71 256674_at AT3G52360 unknown -0.215 0.107
72 249837_at AT5G23480 [SWIB/MDM2 domain] -0.211 -0.015
73 254810_at AT4G12390 PME1, pectin methylesterase inhibitor 1 -0.209 -0.237
74 265584_at AT2G20180 PIF1, PHY-INTERACTING FACTOR 1, PIL5, phytochrome interacting factor 3-like 5 -0.208 -0.092
75 258828_at AT3G07130 ATPAP15, PURPLE ACID PHOSPHATASE 15, PAP15, purple acid phosphatase 15 -0.205 0.078