4.0:Information of module
arr-dmso-sample
In comparison with Cells whole embryo help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0042436 indole-containing compound catabolic pro... BP 7.245e-06
GO:0006569 tryptophan catabolic process BP 3.868e-05
GO:0046218 indolalkylamine catabolic process BP 3.868e-05
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0006875 cellular metal ion homeostasis BP 2.402e-04
GO:0009736 cytokinin-activated signaling pathway BP 3.009e-04
GO:0071368 cellular response to cytokinin stimulus BP 3.009e-04
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
arr-dmso-sample		 Log2 signal ratio
Cells whole embryo
1 256569_at AT3G19550 unknown 0.516 0.186
2 257735_at AT3G27400 [Pectin lyase-like superfamily protein] 0.480 0.743
3 260462_at AT1G10970 ATZIP4, ZIP4, zinc transporter 4 precursor 0.462 0.761
4 253182_at AT4G35190 LOG5, LONELY GUY 5 0.440 -0.377
5 250070_at AT5G17980 [C2 calcium/lipid-binding plant phosphoribosyltransferase family protein] 0.434 0.867
6 264434_at AT1G10340 [Ankyrin repeat family protein] 0.384 -0.021
7 254153_at AT4G24450 ATGWD2, GWD3, PWD, phosphoglucan, water dikinase 0.370 0.754
8 252888_at AT4G39210 APL3 0.366 0.213
9 248476_at AT5G50890 [alpha/beta-Hydrolases superfamily protein] 0.332 0.798
10 261501_at AT1G28390 [Protein kinase superfamily protein] 0.326 -0.186
11 250053_at AT5G17850 [Sodium/calcium exchanger family protein] 0.325 -0.367
12 266989_at AT2G39330 JAL23, jacalin-related lectin 23 0.319 0.430
13 245463_at AT4G17030 AT-EXPR, ATEXLB1, expansin-like B1, ATEXPR1, ATHEXP BETA 3.1, EXLB1, expansin-like B1, EXPR 0.311 0.560
14 253113_at AT4G35985 [Senescence/dehydration-associated protein-related] 0.311 0.643
15 249126_at AT5G43380 TOPP6, type one serine/threonine protein phosphatase 6 0.309 0.306
16 266166_at AT2G28080 [UDP-Glycosyltransferase superfamily protein] 0.307 1.128
17 253002_at AT4G38530 ATPLC1, phospholipase C1, PLC1, phospholipase C1 0.298 -0.053
18 244938_at ATCG01120 RPS15, chloroplast ribosomal protein S15 0.297 -0.270
19 257715_at AT3G12750 AtZIP1, ZIP1, zinc transporter 1 precursor 0.292 0.484
20 260210_at AT1G74420 ATFUT3, FUT3, fucosyltransferase 3 0.284 0.467
21 252296_at AT3G48970 [Heavy metal transport/detoxification superfamily protein ] 0.284 -0.505
22 260028_at AT1G29980 unknown 0.276 0.329
23 246913_at AT5G25830 GATA12, GATA transcription factor 12 0.263 0.531
24 254902_at AT4G11550 [Cysteine/Histidine-rich C1 domain family protein] 0.258 -0.845
25 246891_at AT5G25490 [Ran BP2/NZF zinc finger-like superfamily protein] 0.257 0.417
26 252740_at AT3G43270 [Plant invertase/pectin methylesterase inhibitor superfamily] 0.254 0.449
27 258016_at AT3G19350 MPC, maternally expressed pab C-terminal 0.248 -0.106
28 248681_at AT5G48900 [Pectin lyase-like superfamily protein] 0.243 0.839
29 261023_at AT1G12200 FMO, flavin monooxygenase 0.242 -0.440
30 260030_at AT1G68880 AtbZIP, basic leucine-zipper 8, bZIP, basic leucine-zipper 8 0.235 -0.040
31 264374_at AT2G25180 ARR12, response regulator 12, RR12, response regulator 12 -0.789 0.261
32 259653_at AT1G55240 unknown -0.714 -1.041
33 249686_at AT5G36140 CYP716A2, cytochrome P450, family 716, subfamily A, polypeptide 2 -0.681 -0.051
34 256096_at AT1G13650 unknown -0.610 0.043
35 245504_at AT4G15660 [Thioredoxin superfamily protein] -0.542 -0.453
36 253998_at AT4G26010 [Peroxidase superfamily protein] -0.500 -0.652
37 259388_at AT1G13420 ATST4B, ARABIDOPSIS THALIANA SULFOTRANSFERASE 4B, ST4B, sulfotransferase 4B -0.490 -0.489
38 246197_at AT4G37010 CEN2, centrin 2 -0.489 -1.102
39 266372_at AT2G41310 ARR8, RESPONSE REGULATOR 8, ATRR3, response regulator 3, RR3, response regulator 3 -0.478 -0.200
40 250778_at AT5G05500 MOP10 -0.453 0.275
41 262260_at AT1G70850 MLP34, MLP-like protein 34 -0.413 -1.266
42 267505_at AT2G45560 CYP76C1, cytochrome P450, family 76, subfamily C, polypeptide 1 -0.409 0.181
43 257718_at AT3G18400 anac058, NAC domain containing protein 58, NAC058, NAC domain containing protein 58 -0.385 -0.176
44 254909_at AT4G11210 [Disease resistance-responsive (dirigent-like protein) family protein] -0.356 -1.022
45 245349_at AT4G16690 ATMES16, ARABIDOPSIS THALIANA METHYL ESTERASE 16, MES16, methyl esterase 16 -0.334 0.152
46 267010_at AT2G39250 SNZ, SCHNARCHZAPFEN -0.333 -0.769
47 256427_at AT3G11090 LBD21, LOB domain-containing protein 21 -0.330 0.178
48 259209_at AT3G09160 [RNA-binding (RRM/RBD/RNP motifs) family protein] -0.322 0.068
49 256011_at AT1G19230 [Riboflavin synthase-like superfamily protein] -0.292 -0.840
50 257260_at AT3G22104 [Phototropic-responsive NPH3 family protein] -0.288 -0.145
51 245440_at AT4G16680 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.279 -0.300
52 263442_at AT2G28605 [Photosystem II reaction center PsbP family protein] -0.275 0.163
53 247055_at AT5G66740 unknown -0.269 -0.503
54 247452_at AT5G62430 CDF1, cycling DOF factor 1 -0.259 0.026
55 247734_at AT5G59400 unknown -0.257 0.627
56 254098_at AT4G25100 ATFSD1, ARABIDOPSIS FE SUPEROXIDE DISMUTASE 1, FSD1, Fe superoxide dismutase 1 -0.250 0.432
57 267361_at AT2G39920 [HAD superfamily, subfamily IIIB acid phosphatase ] -0.249 -0.467
58 253613_at AT4G30320 [CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein] -0.247 -0.048
59 266368_at AT2G41380 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.244 0.261