4.0:Information of module
cdm1 mutant floral young floral buds
In comparison with Col in Pi deficiency medium help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:2001057 reactive nitrogen species metabolic proc... BP 9.279e-05
GO:0009611 response to wounding BP 1.101e-03
GO:0010393 galacturonan metabolic process BP 2.003e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0019321 pentose metabolic process BP 4.474e-03
GO:0032940 secretion by cell BP 1.445e-02
GO:0046903 secretion BP 1.445e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
cdm1 mutant floral young floral buds		 Log2 signal ratio
Col in Pi deficiency medium
1 264648_at AT1G09080 BIP3, binding protein 3 0.588 0.015
2 254111_at AT4G24890 ATPAP24, ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 24, PAP24, purple acid phosphatase 24 0.513 0.094
3 262369_at AT1G73010 AtPPsPase1, pyrophosphate-specific phosphatase1, ATPS2, phosphate starvation-induced gene 2, PPsPase1, pyrophosphate-specific phosphatase1, PS2, phosphate starvation-induced gene 2 0.392 0.061
4 253915_at AT4G27280 [Calcium-binding EF-hand family protein] 0.390 0.183
5 251498_at AT3G59070 [Cytochrome b561/ferric reductase transmembrane with DOMON related domain] 0.353 0.024
6 248651_at AT5G49260 unknown 0.338 -0.009
7 257578_x_at AT3G30160 unknown 0.314 0.031
8 247224_at AT5G65080 AGL68, AGAMOUS-like 68, MAF5, MADS AFFECTING FLOWERING 5 0.303 -0.027
9 265422_at AT2G20800 NDB4, NAD(P)H dehydrogenase B4 0.294 0.008
10 248241_at AT5G53960 [ATP binding] 0.286 0.010
11 247293_at AT5G64510 TIN1, tunicamycin induced 1 0.284 -0.092
12 266597_at AT2G46130 ATWRKY43, WRKY DNA-BINDING PROTEIN 43, WRKY43, WRKY DNA-binding protein 43 0.283 0.149
13 249583_at AT5G37770 CML24, CALMODULIN-LIKE 24, TCH2, TOUCH 2 0.260 0.081
14 253839_at AT4G27890 [HSP20-like chaperones superfamily protein] 0.259 -0.001
15 252161_at AT3G50580 [LOCATED IN: endomembrane system] 0.242 0.036
16 257203_at AT3G23730 XTH16, xyloglucan endotransglucosylase/hydrolase 16 0.241 -0.030
17 266447_at AT2G43290 MSS3, multicopy suppressors of snf4 deficiency in yeast 3 0.233 0.011
18 258385_at AT3G15510 ANAC056, Arabidopsis NAC domain containing protein 56, ATNAC2, NAC domain containing protein 2, NAC2, NAC domain containing protein 2, NARS1, NAC-REGULATED SEED MORPHOLOGY 1 0.232 0.060
19 261586_at AT1G01640 [BTB/POZ domain-containing protein] 0.227 0.024
20 254212_at AT4G23580 [Galactose oxidase/kelch repeat superfamily protein] 0.222 0.022
21 250677_at AT5G06520 [SWAP (Suppressor-of-White-APricot)/surp domain-containing protein] 0.219 -0.012
22 246302_at AT3G51860 ATCAX3, ATHCX1, CAX1-LIKE, CAX3, cation exchanger 3 0.214 0.192
23 247739_at AT5G59240 [Ribosomal protein S8e family protein] 0.212 -0.053
24 256108_at AT1G16940 [F-box/RNI-like/FBD-like domains-containing protein] 0.211 0.070
25 245058_at AT2G39790 [Mitochondrial glycoprotein family protein] 0.209 0.003
26 260883_at AT1G29270 unknown 0.202 0.091
27 265186_at AT1G23560 unknown 0.198 -0.078
28 262912_at AT1G59740 AtNPF4.3, NPF4.3, NRT1/ PTR family 4.3 0.196 0.033
29 255575_at AT4G01430 UMAMIT29, Usually multiple acids move in and out Transporters 29 0.192 0.025
30 253653_at AT4G30050 unknown 0.191 0.034
31 250100_at AT5G16570 GLN1;4, glutamine synthetase 1;4 0.182 0.053
32 247189_at AT5G65390 AGP7, arabinogalactan protein 7 0.180 -0.015
33 259507_at AT1G43910 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.179 0.142
34 264348_at AT1G12110 AtNPF6.3, ATNRT1, ARABIDOPSIS THALIANA NITRATE TRANSPORTER 1, B-1, CHL1, CHLORINA 1, CHL1-1, NPF6.3, NRT1/ PTR family 6.3, NRT1, NITRATE TRANSPORTER 1, NRT1.1, nitrate transporter 1.1 0.175 -0.008
35 254158_at AT4G24380 [INVOLVED IN: 10-formyltetrahydrofolate biosynthetic process, folic acid and derivative biosynthetic process] 0.173 0.078
36 265460_at AT2G46600 [Calcium-binding EF-hand family protein] 0.172 0.152
37 254785_at AT4G12730 FLA2, FASCICLIN-like arabinogalactan 2 0.172 -0.032
38 252283_at AT3G48960 [Ribosomal protein L13e family protein] 0.171 -0.015
39 254000_at AT4G26250 AtGolS6, galactinol synthase 6, GolS6, galactinol synthase 6 0.170 0.078
40 256275_at AT3G12110 ACT11, actin-11 0.166 -0.013
41 252615_at AT3G45230 APAP1, ARABINOXYLAN PECTIN ARABINOGALACTAN PROTEIN 1 0.165 -0.021
42 251861_at AT3G54810 BME3, BLUE MICROPYLAR END 3, BME3-ZF, BLUE MICROPYLAR END 3-ZINC FINGER, GATA8, GATA TRANSCRIPTION FACTOR 8 0.164 0.014
43 259433_at AT1G01570 [FUNCTIONS IN: transferase activity, transferring glycosyl groups] 0.162 -0.074
44 258117_at AT3G14700 [SART-1 family] 0.159 -0.057
45 249346_at AT5G40780 LHT1, lysine histidine transporter 1 0.158 -0.005
46 255732_at AT1G25450 CER60, ECERIFERUM 60, KCS5, 3-ketoacyl-CoA synthase 5 0.157 -0.076
47 266787_at AT2G28990 [Leucine-rich repeat protein kinase family protein] 0.155 -0.070
48 266667_at AT2G29770 [Galactose oxidase/kelch repeat superfamily protein] -0.590 0.008
49 248215_at AT5G53680 [RNA-binding (RRM/RBD/RNP motifs) family protein] -0.494 0.064
50 258667_at AT3G08750 [F-box and associated interaction domains-containing protein] -0.476 -0.025
51 249338_at AT5G41090 anac095, NAC domain containing protein 95, NAC095, NAC domain containing protein 95 -0.462 -0.039
52 254435_at AT4G20900 MS5, MALE-STERILE 5, TDM1 -0.460 0.017
53 254946_at AT4G10950 [SGNH hydrolase-type esterase superfamily protein] -0.453 0.091
54 255416_at AT4G03170 [AP2/B3-like transcriptional factor family protein] -0.453 0.001
55 265323_at AT2G18260 ATSYP112, SYP112, syntaxin of plants 112 -0.440 -0.041
56 249041_at AT5G44330 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.439 -0.029
57 247561_at AT5G61110 [zinc ion binding] -0.423 -0.015
58 266677_at AT2G29820 [Galactose oxidase/kelch repeat superfamily protein] -0.401 -0.000
59 246556_at AT5G15480 [C2H2-type zinc finger family protein] -0.400 0.003
60 251651_at AT3G57370 [Cyclin family protein] -0.398 -0.041
61 262213_at AT1G74870 [RING/U-box superfamily protein] -0.394 -0.009
62 255289_at AT4G04690 [F-box and associated interaction domains-containing protein] -0.393 -0.004
63 252221_at AT3G49830 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.389 0.100
64 255275_at AT4G05310 [Ubiquitin-like superfamily protein] -0.383 0.030
65 263378_at AT2G40180 ATHPP2C5, phosphatase 2C5, PP2C5, phosphatase 2C5 -0.383 0.023
66 251441_at AT3G60020 ASK5, SKP1-like 5, SK5, SKP1-like 5 -0.370 -0.024
67 265168_at AT1G23700 [Protein kinase superfamily protein] -0.369 -0.006
68 257451_at AT1G05690 BT3, BTB and TAZ domain protein 3 -0.363 0.055
69 250036_at AT5G18340 [ARM repeat superfamily protein] -0.350 0.018
70 266666_at AT2G29780 [Galactose oxidase/kelch repeat superfamily protein] -0.340 -0.000
71 248702_at AT5G48420 unknown -0.322 -0.046
72 251339_at AT3G60780 unknown -0.313 0.067
73 256975_at AT3G21000 [Gag-Pol-related retrotransposon family protein] -0.309 -0.079
74 247661_at AT5G60080 [Protein kinase superfamily protein] -0.299 -0.020
75 255086_at AT4G09300 [LisH and RanBPM domains containing protein] -0.296 -0.036
76 266390_at AT2G32310 [CCT motif family protein] -0.291 -0.037
77 264269_at AT1G60240 [NAC (No Apical Meristem) domain transcriptional regulator superfamily protein] -0.291 -0.062
78 257693_at AT3G12850 [COP9 signalosome complex-related / CSN complex-related] -0.290 0.010
79 259904_at AT1G74150 [Galactose oxidase/kelch repeat superfamily protein] -0.285 -0.040
80 267598_at AT2G33010 [Ubiquitin-associated (UBA) protein] -0.282 -0.039
81 248600_at AT5G49390 [LOCATED IN: endomembrane system] -0.271 -0.035
82 267039_at AT2G34270 unknown -0.267 -0.054
83 254287_at AT4G22960 unknown -0.263 0.016
84 261890_at AT1G80970 [XH domain-containing protein] -0.252 0.045
85 255339_at AT4G04480 unknown -0.247 -0.009
86 255426_at AT4G03370 [Ubiquitin family protein] -0.244 0.019
87 254135_at AT4G24860 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.236 -0.006
88 262366_at AT1G72890 [Disease resistance protein (TIR-NBS class)] -0.235 -0.009
89 256616_at AT3G22260 [Cysteine proteinases superfamily protein] -0.232 0.009
90 259033_at AT3G09405 [Pectinacetylesterase family protein] -0.232 0.093
91 258424_at AT3G16750 unknown -0.232 -0.058
92 262353_at AT1G64210 [Leucine-rich repeat protein kinase family protein] -0.226 -0.067
93 252873_at AT4G40020 [Myosin heavy chain-related protein] -0.218 -0.004