4.0:Information of module
cdm1 mutant floral young floral buds
In comparison with seed germinating in countinuous light 24h SL help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:2001057 reactive nitrogen species metabolic proc... BP 9.279e-05
GO:0009611 response to wounding BP 1.101e-03
GO:0010393 galacturonan metabolic process BP 2.003e-03
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0019321 pentose metabolic process BP 4.474e-03
GO:0032940 secretion by cell BP 1.445e-02
GO:0046903 secretion BP 1.445e-02
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
cdm1 mutant floral young floral buds		 Log2 signal ratio
seed germinating in countinuous light 24h SL
1 264648_at AT1G09080 BIP3, binding protein 3 0.588 -1.619
2 254111_at AT4G24890 ATPAP24, ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 24, PAP24, purple acid phosphatase 24 0.513 -1.015
3 262369_at AT1G73010 AtPPsPase1, pyrophosphate-specific phosphatase1, ATPS2, phosphate starvation-induced gene 2, PPsPase1, pyrophosphate-specific phosphatase1, PS2, phosphate starvation-induced gene 2 0.392 0.073
4 253915_at AT4G27280 [Calcium-binding EF-hand family protein] 0.390 0.053
5 251498_at AT3G59070 [Cytochrome b561/ferric reductase transmembrane with DOMON related domain] 0.353 -0.874
6 248651_at AT5G49260 unknown 0.338 -0.139
7 257578_x_at AT3G30160 unknown 0.314 0.310
8 247224_at AT5G65080 AGL68, AGAMOUS-like 68, MAF5, MADS AFFECTING FLOWERING 5 0.303 -0.219
9 265422_at AT2G20800 NDB4, NAD(P)H dehydrogenase B4 0.294 0.298
10 248241_at AT5G53960 [ATP binding] 0.286 -0.635
11 247293_at AT5G64510 TIN1, tunicamycin induced 1 0.284 -0.389
12 266597_at AT2G46130 ATWRKY43, WRKY DNA-BINDING PROTEIN 43, WRKY43, WRKY DNA-binding protein 43 0.283 -0.952
13 249583_at AT5G37770 CML24, CALMODULIN-LIKE 24, TCH2, TOUCH 2 0.260 0.649
14 253839_at AT4G27890 [HSP20-like chaperones superfamily protein] 0.259 -0.410
15 252161_at AT3G50580 [LOCATED IN: endomembrane system] 0.242 -0.898
16 257203_at AT3G23730 XTH16, xyloglucan endotransglucosylase/hydrolase 16 0.241 1.057
17 266447_at AT2G43290 MSS3, multicopy suppressors of snf4 deficiency in yeast 3 0.233 0.012
18 258385_at AT3G15510 ANAC056, Arabidopsis NAC domain containing protein 56, ATNAC2, NAC domain containing protein 2, NAC2, NAC domain containing protein 2, NARS1, NAC-REGULATED SEED MORPHOLOGY 1 0.232 -0.426
19 261586_at AT1G01640 [BTB/POZ domain-containing protein] 0.227 -0.191
20 254212_at AT4G23580 [Galactose oxidase/kelch repeat superfamily protein] 0.222 -0.331
21 250677_at AT5G06520 [SWAP (Suppressor-of-White-APricot)/surp domain-containing protein] 0.219 -1.270
22 246302_at AT3G51860 ATCAX3, ATHCX1, CAX1-LIKE, CAX3, cation exchanger 3 0.214 -0.321
23 247739_at AT5G59240 [Ribosomal protein S8e family protein] 0.212 -0.642
24 256108_at AT1G16940 [F-box/RNI-like/FBD-like domains-containing protein] 0.211 -0.746
25 245058_at AT2G39790 [Mitochondrial glycoprotein family protein] 0.209 -0.316
26 260883_at AT1G29270 unknown 0.202 -0.741
27 265186_at AT1G23560 unknown 0.198 -0.920
28 262912_at AT1G59740 AtNPF4.3, NPF4.3, NRT1/ PTR family 4.3 0.196 -1.019
29 255575_at AT4G01430 UMAMIT29, Usually multiple acids move in and out Transporters 29 0.192 -0.915
30 253653_at AT4G30050 unknown 0.191 -0.762
31 250100_at AT5G16570 GLN1;4, glutamine synthetase 1;4 0.182 -0.419
32 247189_at AT5G65390 AGP7, arabinogalactan protein 7 0.180 0.002
33 259507_at AT1G43910 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] 0.179 -0.974
34 264348_at AT1G12110 AtNPF6.3, ATNRT1, ARABIDOPSIS THALIANA NITRATE TRANSPORTER 1, B-1, CHL1, CHLORINA 1, CHL1-1, NPF6.3, NRT1/ PTR family 6.3, NRT1, NITRATE TRANSPORTER 1, NRT1.1, nitrate transporter 1.1 0.175 0.256
35 254158_at AT4G24380 [INVOLVED IN: 10-formyltetrahydrofolate biosynthetic process, folic acid and derivative biosynthetic process] 0.173 0.196
36 265460_at AT2G46600 [Calcium-binding EF-hand family protein] 0.172 -0.012
37 254785_at AT4G12730 FLA2, FASCICLIN-like arabinogalactan 2 0.172 1.362
38 252283_at AT3G48960 [Ribosomal protein L13e family protein] 0.171 -1.201
39 254000_at AT4G26250 AtGolS6, galactinol synthase 6, GolS6, galactinol synthase 6 0.170 -1.139
40 256275_at AT3G12110 ACT11, actin-11 0.166 0.535
41 252615_at AT3G45230 APAP1, ARABINOXYLAN PECTIN ARABINOGALACTAN PROTEIN 1 0.165 0.698
42 251861_at AT3G54810 BME3, BLUE MICROPYLAR END 3, BME3-ZF, BLUE MICROPYLAR END 3-ZINC FINGER, GATA8, GATA TRANSCRIPTION FACTOR 8 0.164 -0.035
43 259433_at AT1G01570 [FUNCTIONS IN: transferase activity, transferring glycosyl groups] 0.162 -0.782
44 258117_at AT3G14700 [SART-1 family] 0.159 -0.035
45 249346_at AT5G40780 LHT1, lysine histidine transporter 1 0.158 0.887
46 255732_at AT1G25450 CER60, ECERIFERUM 60, KCS5, 3-ketoacyl-CoA synthase 5 0.157 0.047
47 266787_at AT2G28990 [Leucine-rich repeat protein kinase family protein] 0.155 -0.418
48 266667_at AT2G29770 [Galactose oxidase/kelch repeat superfamily protein] -0.590 -0.537
49 248215_at AT5G53680 [RNA-binding (RRM/RBD/RNP motifs) family protein] -0.494 -1.406
50 258667_at AT3G08750 [F-box and associated interaction domains-containing protein] -0.476 -0.468
51 249338_at AT5G41090 anac095, NAC domain containing protein 95, NAC095, NAC domain containing protein 95 -0.462 -0.921
52 254435_at AT4G20900 MS5, MALE-STERILE 5, TDM1 -0.460 -0.825
53 254946_at AT4G10950 [SGNH hydrolase-type esterase superfamily protein] -0.453 -1.062
54 255416_at AT4G03170 [AP2/B3-like transcriptional factor family protein] -0.453 -0.611
55 265323_at AT2G18260 ATSYP112, SYP112, syntaxin of plants 112 -0.440 -0.504
56 249041_at AT5G44330 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.439 -0.104
57 247561_at AT5G61110 [zinc ion binding] -0.423 -0.361
58 266677_at AT2G29820 [Galactose oxidase/kelch repeat superfamily protein] -0.401 -0.720
59 246556_at AT5G15480 [C2H2-type zinc finger family protein] -0.400 -0.667
60 251651_at AT3G57370 [Cyclin family protein] -0.398 -1.035
61 262213_at AT1G74870 [RING/U-box superfamily protein] -0.394 -0.752
62 255289_at AT4G04690 [F-box and associated interaction domains-containing protein] -0.393 -0.104
63 252221_at AT3G49830 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.389 0.105
64 255275_at AT4G05310 [Ubiquitin-like superfamily protein] -0.383 -0.676
65 263378_at AT2G40180 ATHPP2C5, phosphatase 2C5, PP2C5, phosphatase 2C5 -0.383 -0.637
66 251441_at AT3G60020 ASK5, SKP1-like 5, SK5, SKP1-like 5 -0.370 -0.809
67 265168_at AT1G23700 [Protein kinase superfamily protein] -0.369 -0.851
68 257451_at AT1G05690 BT3, BTB and TAZ domain protein 3 -0.363 0.441
69 250036_at AT5G18340 [ARM repeat superfamily protein] -0.350 -0.756
70 266666_at AT2G29780 [Galactose oxidase/kelch repeat superfamily protein] -0.340 -0.023
71 248702_at AT5G48420 unknown -0.322 -0.159
72 251339_at AT3G60780 unknown -0.313 -0.418
73 256975_at AT3G21000 [Gag-Pol-related retrotransposon family protein] -0.309 -0.568
74 247661_at AT5G60080 [Protein kinase superfamily protein] -0.299 -0.984
75 255086_at AT4G09300 [LisH and RanBPM domains containing protein] -0.296 -0.441
76 266390_at AT2G32310 [CCT motif family protein] -0.291 -1.093
77 264269_at AT1G60240 [NAC (No Apical Meristem) domain transcriptional regulator superfamily protein] -0.291 -0.687
78 257693_at AT3G12850 [COP9 signalosome complex-related / CSN complex-related] -0.290 -0.020
79 259904_at AT1G74150 [Galactose oxidase/kelch repeat superfamily protein] -0.285 -1.195
80 267598_at AT2G33010 [Ubiquitin-associated (UBA) protein] -0.282 -0.069
81 248600_at AT5G49390 [LOCATED IN: endomembrane system] -0.271 -0.495
82 267039_at AT2G34270 unknown -0.267 -0.309
83 254287_at AT4G22960 unknown -0.263 -0.083
84 261890_at AT1G80970 [XH domain-containing protein] -0.252 -0.393
85 255339_at AT4G04480 unknown -0.247 -0.159
86 255426_at AT4G03370 [Ubiquitin family protein] -0.244 0.360
87 254135_at AT4G24860 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.236 -0.734
88 262366_at AT1G72890 [Disease resistance protein (TIR-NBS class)] -0.235 -1.093
89 256616_at AT3G22260 [Cysteine proteinases superfamily protein] -0.232 -1.060
90 259033_at AT3G09405 [Pectinacetylesterase family protein] -0.232 0.161
91 258424_at AT3G16750 unknown -0.232 -0.027
92 262353_at AT1G64210 [Leucine-rich repeat protein kinase family protein] -0.226 0.027
93 252873_at AT4G40020 [Myosin heavy chain-related protein] -0.218 0.151