4.0:Information of module
Te 1d
In comparison with rosette leaves fdh help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0006865 amino acid transport BP 3.232e-21
GO:0015849 organic acid transport BP 6.201e-20
GO:0046942 carboxylic acid transport BP 6.201e-20
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View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0015979 photosynthesis BP 1.444e-11
GO:0019684 photosynthesis, light reaction BP 5.627e-10
GO:0044272 sulfur compound biosynthetic process BP 2.166e-08
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View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Te 1d		 Log2 signal ratio
rosette leaves fdh
1 254314_at AT4G22470 [protease inhibitor/seed storage/lipid transfer protein (LTP) family protein] 1.140 0.491
2 247478_at AT5G62360 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 1.092 0.284
3 263210_at AT1G10585 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 1.080 0.391
4 267147_at AT2G38240 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 1.038 0.337
5 267384_at AT2G44370 [Cysteine/Histidine-rich C1 domain family protein] 1.001 0.607
6 253628_at AT4G30280 ATXTH18, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 18, XTH18, xyloglucan endotransglucosylase/hydrolase 18 0.944 0.644
7 266875_at AT2G44800 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] 0.928 0.003
8 258383_at AT3G15440 unknown 0.922 -0.037
9 264415_at AT1G43160 RAP2.6, related to AP2 6 0.911 0.974
10 256181_at AT1G51820 [Leucine-rich repeat protein kinase family protein] 0.911 0.461
11 258516_at AT3G06490 AtMYB108, myb domain protein 108, BOS1, BOTRYTIS-SUSCEPTIBLE1, MYB108, myb domain protein 108 0.895 0.101
12 267493_at AT2G30400 ATOFP2, ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 2, OFP2, ovate family protein 2 0.796 0.002
13 256169_at AT1G51800 IOS1, IMPAIRED OOMYCETE SUSCEPTIBILITY 1 0.789 0.748
14 262254_at AT1G53920 GLIP5, GDSL-motif lipase 5 0.789 0.099
15 262756_at AT1G16370 ATOCT6, ARABIDOPSIS THALIANA ORGANIC CATION/CARNITINE TRANSPORTER 6, OCT6, organic cation/carnitine transporter 6 0.759 0.213
16 254652_at AT4G18170 ATWRKY28, WRKY28, WRKY DNA-binding protein 28 0.726 0.602
17 258742_at AT3G05800 AIF1, AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1 0.705 0.043
18 245871_at AT1G26290 unknown 0.682 -0.032
19 257373_at AT2G43140 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.674 0.144
20 256349_at AT1G54890 [Late embryogenesis abundant (LEA) protein-related] 0.667 -0.078
21 247922_at AT5G57500 [Galactosyltransferase family protein] 0.665 0.109
22 267411_at AT2G34930 [disease resistance family protein / LRR family protein] 0.664 0.391
23 252045_at AT3G52450 AtPUB22, PUB22, plant U-box 22 0.664 0.578
24 253608_at AT4G30290 ATXTH19, XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 19, XTH19, xyloglucan endotransglucosylase/hydrolase 19 0.653 0.952
25 251144_at AT5G01210 [HXXXD-type acyl-transferase family protein] 0.634 0.588
26 248205_at AT5G54300 unknown 0.632 0.287
27 248895_at AT5G46330 FLS2, FLAGELLIN-SENSITIVE 2 0.618 0.258
28 258037_at AT3G21230 4CL5, 4-coumarate:CoA ligase 5 0.616 0.477
29 258935_at AT3G10120 unknown 0.609 0.123
30 261021_at AT1G26380 [FAD-binding Berberine family protein] 0.607 0.715
31 261728_at AT1G76160 sks5, SKU5 similar 5 0.606 0.135
32 254293_at AT4G23060 IQD22, IQ-domain 22 0.590 0.260
33 248801_at AT5G47370 HAT2 0.584 0.215
34 261899_at AT1G80820 ATCCR2, CCR2, cinnamoyl coa reductase 0.578 0.452
35 245636_at AT1G25240 [ENTH/VHS/GAT family protein] 0.573 -0.068
36 259076_at AT3G02140 AFP4, ABI FIVE BINDING PROTEIN 4, TMAC2, TWO OR MORE ABRES-CONTAINING GENE 2 0.573 0.049
37 260546_at AT2G43520 ATTI2, trypsin inhibitor protein 2, TI2, trypsin inhibitor protein 2 0.571 0.171
38 267140_at AT2G38250 [Homeodomain-like superfamily protein] 0.570 0.233
39 258402_at AT3G15450 [Aluminium induced protein with YGL and LRDR motifs] 0.565 0.455
40 259946_at AT1G71450 [Integrase-type DNA-binding superfamily protein] 0.560 -0.024
41 245363_at AT4G15120 [VQ motif-containing protein] 0.546 0.119
42 267034_at AT2G38310 PYL4, PYR1-like 4, RCAR10, regulatory components of ABA receptor 10 0.546 -0.011
43 250680_at AT5G06570 [alpha/beta-Hydrolases superfamily protein] 0.540 0.178
44 266693_at AT2G19800 MIOX2, myo-inositol oxygenase 2 0.536 0.422
45 259445_at AT1G02400 ATGA2OX4, Arabidopsis thaliana gibberellin 2-oxidase 4, ATGA2OX6, ARABIDOPSIS THALIANA GIBBERELLIN 2-OXIDASE 6, DTA1, DOWNSTREAM TARGET OF AGL15 1, GA2OX6, gibberellin 2-oxidase 6 0.529 0.489
46 245976_at AT5G13080 ATWRKY75, ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 75, WRKY75, WRKY DNA-binding protein 75 0.513 0.121
47 267008_at AT2G39350 ABCG1, ATP-binding cassette G1 0.508 0.741
48 246195_at AT4G36410 UBC17, ubiquitin-conjugating enzyme 17 0.493 0.072
49 248812_at AT5G47330 [alpha/beta-Hydrolases superfamily protein] 0.485 0.851
50 246584_at AT5G14730 unknown 0.481 0.080
51 251176_at AT3G63380 [ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein] 0.474 0.139
52 265547_at AT2G28305 ATLOG1, LOG1, LONELY GUY 1 0.474 -0.085
53 251603_at AT3G57760 [Protein kinase superfamily protein] 0.474 0.329
54 250777_at AT5G05440 PYL5, PYRABACTIN RESISTANCE 1-LIKE 5, RCAR8, regulatory component of ABA receptor 8 0.474 0.247
55 261187_at AT1G32860 [Glycosyl hydrolase superfamily protein] 0.472 0.021
56 256781_at AT3G13650 [Disease resistance-responsive (dirigent-like protein) family protein] 0.466 -0.035
57 253416_at AT4G33070 AtPDC1, PDC1, pyruvate decarboxylase 1 0.463 0.001
58 258805_at AT3G04010 [O-Glycosyl hydrolases family 17 protein] 0.463 0.152
59 250968_at AT5G02890 [HXXXD-type acyl-transferase family protein] 0.461 0.068
60 253891_at AT4G27720 [Major facilitator superfamily protein] 0.454 0.058
61 263948_at AT2G35980 ATNHL10, ARABIDOPSIS NDR1/HIN1-LIKE 10, NHL10, NDR1/HIN1-LIKE, YLS9, YELLOW-LEAF-SPECIFIC GENE 9 0.448 0.287
62 256548_at AT3G14770 AtSWEET2, SWEET2 0.440 -0.129
63 260628_at AT1G62320 [ERD (early-responsive to dehydration stress) family protein] 0.439 -0.055
64 249750_at AT5G24570 unknown 0.434 0.046
65 262630_at AT1G06520 ATGPAT1, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 1, GPAT1, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 1, sn-2-GPAT1, GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 1 0.432 0.146
66 253181_at AT4G35180 LHT7, LYS/HIS transporter 7 0.430 0.314
67 260335_at AT1G74000 SS3, strictosidine synthase 3 0.426 0.391
68 245635_at AT1G25250 AtIDD16, indeterminate(ID)-domain 16, IDD16, indeterminate(ID)-domain 16 0.426 -0.063
69 250662_at AT5G07010 ATST2A, ARABIDOPSIS THALIANA SULFOTRANSFERASE 2A, ST2A, sulfotransferase 2A 0.424 0.639
70 253322_at AT4G33980 unknown 0.420 -0.061
71 253679_at AT4G29610 [Cytidine/deoxycytidylate deaminase family protein] 0.417 -0.004
72 261481_at AT1G14260 [RING/FYVE/PHD zinc finger superfamily protein] 0.417 0.048
73 259014_at AT3G07320 [O-Glycosyl hydrolases family 17 protein] 0.411 0.060
74 262448_at AT1G49450 [Transducin/WD40 repeat-like superfamily protein] 0.410 0.316
75 258100_at AT3G23550 [MATE efflux family protein] 0.402 0.432
76 266799_at AT2G22860 ATPSK2, phytosulfokine 2 precursor, PSK2, phytosulfokine 2 precursor 0.397 0.261
77 249422_at AT5G39760 AtHB23, homeobox protein 23, HB23, homeobox protein 23, ZHD10, ZINC FINGER HOMEODOMAIN 10 0.396 0.147
78 259841_at AT1G52200 [PLAC8 family protein] 0.395 0.673
79 251770_at AT3G55970 ATJRG21, JRG21, jasmonate-regulated gene 21 0.392 0.371
80 255942_at AT1G22360 AtUGT85A2, UDP-glucosyl transferase 85A2, UGT85A2, UDP-glucosyl transferase 85A2 0.390 0.230
81 263305_at AT2G01930 ATBPC1, BASIC PENTACYSTEINE1, BBR, BPC1, basic pentacysteine1 0.388 0.185
82 254447_at AT4G20860 [FAD-binding Berberine family protein] 0.387 0.735
83 248100_at AT5G55180 [O-Glycosyl hydrolases family 17 protein] 0.386 0.033
84 250569_at AT5G08130 BIM1 0.378 -0.034
85 248118_at AT5G55050 [GDSL-like Lipase/Acylhydrolase superfamily protein] 0.375 0.150
86 245336_at AT4G16515 CLEL 6, CLE-like 6, GLV1, GOLVEN 1, RGF6, root meristem growth factor 6 0.372 0.123
87 264005_at AT2G22470 AGP2, arabinogalactan protein 2, ATAGP2 0.367 0.335
88 253828_at AT4G27970 SLAH2, SLAC1 homologue 2 0.363 0.079
89 265680_at AT2G32150 [Haloacid dehalogenase-like hydrolase (HAD) superfamily protein] 0.362 0.208
90 261937_at AT1G22570 [Major facilitator superfamily protein] 0.362 0.061
91 248870_at AT5G46710 [PLATZ transcription factor family protein] 0.359 0.254
92 245699_at AT5G04250 [Cysteine proteinases superfamily protein] 0.358 0.067
93 263584_at AT2G17040 anac036, NAC domain containing protein 36, NAC036, NAC domain containing protein 36 -0.707 0.048
94 245755_at AT1G35210 unknown -0.652 0.529
95 259432_at AT1G01520 ASG4, ALTERED SEED GERMINATION 4 -0.646 -0.465
96 254229_at AT4G23610 [Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family] -0.619 0.283
97 259850_at AT1G72240 unknown -0.601 0.314
98 264866_at AT1G24140 [Matrixin family protein] -0.553 0.251
99 263915_at AT2G36430 unknown -0.423 -0.078
100 262913_at AT1G59960 [NAD(P)-linked oxidoreductase superfamily protein] -0.383 0.116
101 266439_s_at AT2G43200 [S-adenosyl-L-methionine-dependent methyltransferases superfamily protein] -0.381 -0.045
102 249417_at AT5G39670 [Calcium-binding EF-hand family protein] -0.378 0.299
103 262382_at AT1G72920 [Toll-Interleukin-Resistance (TIR) domain family protein] -0.357 0.244
104 245084_at AT2G23290 AtMYB70, myb domain protein 70, MYB70, myb domain protein 70 -0.349 0.137
105 264694_at AT1G70250 [receptor serine/threonine kinase, putative] -0.336 -0.181
106 249612_at AT5G37290 [ARM repeat superfamily protein] -0.333 -0.139
107 265892_at AT2G15020 unknown -0.324 -0.255
108 264507_at AT1G09415 NIMIN-3, NIM1-interacting 3 -0.323 -0.089
109 248230_at AT5G53830 [VQ motif-containing protein] -0.317 0.036
110 247977_at AT5G56850 unknown -0.308 -0.158
111 259760_at AT1G77580 unknown -0.302 -0.111
112 257625_at AT3G26230 CYP71B24, cytochrome P450, family 71, subfamily B, polypeptide 24 -0.296 0.101
113 259385_at AT1G13470 unknown -0.292 0.464
114 259541_at AT1G20650 ASG5, ALTERED SEED GERMINATION 5 -0.290 -0.113
115 261032_at AT1G17430 [alpha/beta-Hydrolases superfamily protein] -0.289 0.100
116 251644_at AT3G57540 [Remorin family protein] -0.288 0.028
117 256596_at AT3G28540 [P-loop containing nucleoside triphosphate hydrolases superfamily protein] -0.287 0.100
118 267063_at AT2G41120 unknown -0.286 -0.136
119 256379_at AT1G66840 PMI2, plastid movement impaired 2, WEB2, WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 2 -0.285 -0.264
120 247467_at AT5G62130 [Per1-like family protein] -0.284 -0.213
121 252411_at AT3G47430 PEX11B, peroxin 11B -0.271 -0.237
122 246777_at AT5G27420 ATL31, Arabidopsis toxicos en levadura 31, CNI1, carbon/nitrogen insensitive 1 -0.263 0.383
123 260812_at AT1G43650 UMAMIT22, Usually multiple acids move in and out Transporters 22 -0.262 0.005
124 251373_at AT3G60530 GATA4, GATA transcription factor 4 -0.262 0.174
125 246591_at AT5G14880 KUP8, potassium uptake 8 -0.260 -0.086
126 254145_at AT4G24700 unknown -0.257 -0.218
127 249601_at AT5G37980 [Zinc-binding dehydrogenase family protein] -0.257 -0.071
128 262275_at AT1G68710 [ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein] -0.256 -0.096
129 259535_at AT1G12280 SUMM2, suppressor of mkk1 mkk2 2 -0.255 -0.243
130 249726_at AT5G35480 unknown -0.253 -0.067
131 266001_at AT2G24150 HHP3, heptahelical protein 3 -0.249 -0.025
132 249321_at AT5G40920 [pseudogene] -0.247 -0.134
133 259927_at AT1G75100 JAC1, J-domain protein required for chloroplast accumulation response 1 -0.243 -0.020
134 262780_at AT1G13090 CYP71B28, cytochrome P450, family 71, subfamily B, polypeptide 28 -0.242 -0.029
135 255653_at AT4G00960 [Protein kinase superfamily protein] -0.240 -0.068
136 261819_at AT1G11410 [S-locus lectin protein kinase family protein] -0.238 -0.260
137 254982_at AT4G10470 unknown -0.235 -0.083
138 253548_at AT4G30993 [Calcineurin-like metallo-phosphoesterase superfamily protein] -0.233 -0.030
139 251665_at AT3G57040 ARR9, response regulator 9, ATRR4, RESPONSE REGULATOR 4 -0.230 -0.125
140 253249_at AT4G34680 GATA3, GATA transcription factor 3 -0.230 -0.120
141 256336_at AT1G72030 [Acyl-CoA N-acyltransferases (NAT) superfamily protein] -0.228 -0.175
142 255888_at AT1G20300 [Pentatricopeptide repeat (PPR) superfamily protein] -0.227 -0.020
143 263142_at AT1G65230 [Uncharacterized conserved protein (DUF2358)] -0.214 -0.068
144 255088_at AT4G09350 CRRJ, CHLORORESPIRATORY REDUCTION J, DJC75, DNA J protein C75, NdhT, NADH dehydrogenase-like complex T -0.208 -0.130
145 250955_at AT5G03190 CPUORF47, conserved peptide upstream open reading frame 47 -0.194 -0.089
146 260419_at AT1G69730 [Wall-associated kinase family protein] -0.192 -0.017
147 248908_at AT5G45800 MEE62, maternal effect embryo arrest 62 -0.191 0.009
148 256892_at AT3G19000 [2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein] -0.191 -0.110
149 266372_at AT2G41310 ARR8, RESPONSE REGULATOR 8, ATRR3, response regulator 3, RR3, response regulator 3 -0.190 -0.144
150 261221_at AT1G19960 unknown -0.186 0.082
151 249006_at AT5G44660 unknown -0.185 -0.147
152 260259_at AT1G74300 [alpha/beta-Hydrolases superfamily protein] -0.183 -0.078
153 267367_at AT2G44210 unknown -0.183 0.001
154 263674_at AT2G04790 unknown -0.182 -0.212
155 246260_at AT1G31820 PUT1, POLYAMINE UPTAKE TRANSPORTER 1 -0.180 0.030
156 250942_at AT5G03350 [Legume lectin family protein] -0.180 0.005
157 253283_at AT4G34090 unknown -0.179 -0.183
158 248303_at AT5G53170 FTSH11, FTSH protease 11 -0.178 -0.064
159 250372_at AT5G11460 unknown -0.177 -0.188
160 257932_at AT3G17040 HCF107, high chlorophyll fluorescent 107 -0.176 -0.052
161 256755_at AT3G25600 [Calcium-binding EF-hand family protein] -0.175 0.181
162 253414_at AT4G33050 AtIQM1, EDA39, embryo sac development arrest 39, IQM1, IQ-motif protein 1 -0.172 0.098
163 259038_at AT3G09210 PTAC13, plastid transcriptionally active 13 -0.172 -0.076
164 261196_at AT1G12860 ICE2, INDUCER OF CBF EXPRESSION 2, SCRM2, SCREAM 2 -0.170 -0.058
165 255857_at AT1G67080 ABA4, abscisic acid (ABA)-deficient 4 -0.169 -0.004
166 253218_at AT4G34980 SLP2, subtilisin-like serine protease 2 -0.168 -0.026
167 249524_at AT5G38520 [alpha/beta-Hydrolases superfamily protein] -0.168 -0.102
168 247419_at AT5G63080 JMJ20, Jumonji domain-containing protein 20 -0.168 -0.073
169 245265_at AT4G14400 ACD6, ACCELERATED CELL DEATH 6 -0.167 -0.043
170 262612_at AT1G14150 PnsL2, Photosynthetic NDH subcomplex L 2, PQL1, PsbQ-like 1, PQL2, PsbQ-like 2 -0.167 -0.071
171 253479_at AT4G32360 [Pyridine nucleotide-disulphide oxidoreductase family protein] -0.166 0.015
172 257635_at AT3G26280 CYP71B4, cytochrome P450, family 71, subfamily B, polypeptide 4 -0.165 0.092
173 251704_at AT3G56360 unknown -0.165 -0.233
174 252934_at AT4G39120 HISN7, HISTIDINE BIOSYNTHESIS 7, IMPL2, myo-inositol monophosphatase like 2 -0.164 -0.018
175 255224_at AT4G05400 [copper ion binding] -0.163 -0.024
176 253701_at AT4G29890 [choline monooxygenase, putative (CMO-like)] -0.163 -0.077
177 259689_x_at AT1G63130 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.162 -0.087
178 245830_at AT1G57790 [F-box family protein] -0.162 0.075
179 260645_at AT1G53300 TTL1, tetratricopeptide-repeat thioredoxin-like 1 -0.161 -0.024
180 258894_at AT3G05650 AtRLP32, receptor like protein 32, RLP32, receptor like protein 32 -0.161 0.032
181 248753_at AT5G47630 mtACP3, mitochondrial acyl carrier protein 3 -0.161 -0.180
182 256613_at AT3G29290 emb2076, embryo defective 2076 -0.161 -0.210
183 262366_at AT1G72890 [Disease resistance protein (TIR-NBS class)] -0.160 -0.002