4.0:Information of module
Col 8h
In comparison with Roots Cd help
Scatter plot of seleted modules.
Trend of Up regulated genes including module
GOID Term Ontology p-value
GO:0010200 response to chitin BP 9.777e-04
GO:0010243 response to organonitrogen compound BP 1.589e-03
GO:0045229 external encapsulating structure organiz... BP 3.689e-03
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
Trend of Down regulated genes including module
GOID Term Ontology p-value
GO:0008356 asymmetric cell division BP 1.338e-03
GO:0009739 response to gibberellin BP 9.579e-03
GO:0009740 gibberellic acid mediated signaling path... BP 2.097e-02
･･･ ･･･ ･･･ ･･･
View Hierarchical networks of GOs (      )
List of genes in module
･･･up requlated genes  ･･･down regulated genes
probeID AGICode Annotation Log2 signal ratio
Col 8h		 Log2 signal ratio
Roots Cd
1 248389_at AT5G51990 CBF4, C-repeat-binding factor 4, DREB1D, DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 1.011 -0.077
2 258383_at AT3G15440 unknown 0.887 -0.012
3 247478_at AT5G62360 [Plant invertase/pectin methylesterase inhibitor superfamily protein] 0.807 -0.107
4 266455_at AT2G22760 [basic helix-loop-helix (bHLH) DNA-binding superfamily protein] 0.800 -0.327
5 245677_at AT1G56660 unknown 0.742 -0.029
6 258139_at AT3G24520 AT-HSFC1, HSFC1, heat shock transcription factor C1 0.729 -0.151
7 266232_at AT2G02310 AtPP2-B6, phloem protein 2-B6, PP2-B6, phloem protein 2-B6 0.695 -0.178
8 245826_at AT1G57850 [Toll-Interleukin-Resistance (TIR) domain family protein] 0.688 0.005
9 251925_at AT3G54000 unknown 0.618 -0.126
10 248502_at AT5G50450 [HCP-like superfamily protein with MYND-type zinc finger] 0.617 -0.040
11 259946_at AT1G71450 [Integrase-type DNA-binding superfamily protein] 0.590 -0.086
12 260915_at AT1G02660 [alpha/beta-Hydrolases superfamily protein] 0.563 -0.091
13 266545_at AT2G35290 SAUR79, SMALL AUXIN UPREGULATED RNA 79 0.504 -0.184
14 264758_at AT1G61340 AtFBS1, FBS1, F-box stress induced 1 0.492 -0.504
15 258742_at AT3G05800 AIF1, AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1 0.482 0.074
16 261101_at AT1G63030 ddf2, DWARF AND DELAYED FLOWERING 2 0.481 -0.160
17 257999_at AT3G27540 [beta-1,4-N-acetylglucosaminyltransferase family protein] 0.473 -0.192
18 245251_at AT4G17615 ATCBL1, ARABIDOPSIS THALIANA CALCINEURIN B-LIKE PROTEIN, CBL1, calcineurin B-like protein 1, SCABP5, SOS3-LIKE CALCIUM BINDING PROTEIN 5 0.412 -0.154
19 253104_at AT4G36010 [Pathogenesis-related thaumatin superfamily protein] 0.410 -0.116
20 250781_at AT5G05410 DREB2, DEHYDRATION-RESPONSIVE ELEMENT BINDING PROTEIN 2, DREB2A, DRE-binding protein 2A 0.409 -0.287
21 252214_at AT3G50260 ATERF#011, CEJ1, cooperatively regulated by ethylene and jasmonate 1, DEAR1, DREB AND EAR MOTIF PROTEIN 1 0.409 -0.118
22 253614_at AT4G30350 SMXL2, SMAX1-like 2 0.405 0.044
23 256884_at AT3G15200 [Tetratricopeptide repeat (TPR)-like superfamily protein] 0.403 0.012
24 256715_at AT2G34090 MEE18, maternal effect embryo arrest 18 0.394 -0.019
25 247047_at AT5G66650 unknown 0.353 -0.286
26 251336_at AT3G61190 BAP1, BON association protein 1 0.348 -0.321
27 253123_at AT4G36000 [Pathogenesis-related thaumatin superfamily protein] 0.333 -0.061
28 245151_at AT2G47550 [Plant invertase/pectin methylesterase inhibitor superfamily] 0.327 -0.133
29 253872_at AT4G27410 ANAC072, Arabidopsis NAC domain containing protein 72, RD26, RESPONSIVE TO DESICCATION 26 0.320 0.047
30 247393_at AT5G63130 [Octicosapeptide/Phox/Bem1p family protein] 0.308 -0.204
31 260405_at AT1G69930 ATGSTU11, glutathione S-transferase TAU 11, GSTU11, glutathione S-transferase TAU 11 0.307 -0.275
32 262768_at AT1G12990 [beta-1,4-N-acetylglucosaminyltransferase family protein] 0.306 -0.103
33 251356_at AT3G61060 AtPP2-A13, phloem protein 2-A13, PP2-A13, phloem protein 2-A13 0.297 -0.002
34 259473_at AT1G19025 [DNA repair metallo-beta-lactamase family protein] 0.282 -0.058
35 246235_at AT4G36830 HOS3-1 0.278 0.012
36 264467_at AT1G10140 [Uncharacterised conserved protein UCP031279] 0.262 0.004
37 252972_at AT4G38840 SAUR14, SMALL AUXIN UPREGULATED RNA 14 -0.593 0.004
38 259143_at AT3G10190 [Calcium-binding EF-hand family protein] -0.416 -0.020
39 251321_at AT3G61460 BRH1, brassinosteroid-responsive RING-H2 -0.344 0.032
40 253836_at AT4G27840 [SNARE-like superfamily protein] -0.287 0.115
41 266273_at AT2G29410 ATMTPB1, MTPB1, metal tolerance protein B1 -0.267 0.074
42 251665_at AT3G57040 ARR9, response regulator 9, ATRR4, RESPONSE REGULATOR 4 -0.263 0.092
43 255794_at AT2G33480 ANAC041, NAC domain containing protein 41, NAC041, NAC domain containing protein 41 -0.244 0.060
44 257571_at AT3G16870 GATA17, GATA transcription factor 17 -0.201 -0.124
45 251714_at AT3G56370 [Leucine-rich repeat protein kinase family protein] -0.200 0.143
46 247038_at AT5G67160 EPS1, ENHANCED PSEUDOMONAS SUSCEPTIBILTY 1 -0.175 -0.056
47 248286_at AT5G52870 MAKR5, MEMBRANE-ASSOCIATED KINASE REGULATOR 5 -0.174 -0.162
48 256212_at AT1G50970 [Membrane trafficking VPS53 family protein] -0.163 -0.059
49 250572_at AT5G08210 MIR834A, microRNA834A -0.148 0.123
50 259220_at AT3G03550 [RING/U-box superfamily protein] -0.139 0.039
51 251206_at AT3G63090 [Ubiquitin carboxyl-terminal hydrolase family protein] -0.133 0.018
52 258250_at AT3G15850 ADS3, AtADS3, FAD5, fatty acid desaturase 5, FADB, FATTY ACID DESATURASE B, JB67 -0.131 0.003
53 259871_at AT1G76800 [Vacuolar iron transporter (VIT) family protein] -0.128 0.163
54 265819_at AT2G17972 unknown -0.126 0.021
55 263738_at AT1G60060 [Serine/threonine-protein kinase WNK (With No Lysine)-related] -0.125 -0.068
56 263664_at AT1G04250 AXR3, AUXIN RESISTANT 3, IAA17, indole-3-acetic acid inducible 17 -0.124 -0.016
57 252834_at AT4G40070 [RING/U-box superfamily protein] -0.123 0.236
58 260439_at AT1G68340 unknown -0.123 -0.022
59 251663_at AT3G57070 [Glutaredoxin family protein] -0.123 -0.154
60 248871_at AT5G46680 [Pentatricopeptide repeat (PPR-like) superfamily protein] -0.118 0.001
61 257765_at AT3G23020 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.117 0.002
62 247169_at AT5G65520 [Tetratricopeptide repeat (TPR)-like superfamily protein] -0.116 0.112
63 266295_at AT2G29550 TUB7, tubulin beta-7 chain -0.112 0.050
64 253283_at AT4G34090 unknown -0.110 0.143
65 246264_at AT1G31814 FRL2, FRIGIDA like 2 -0.106 -0.030
66 251367_at AT3G61350 SKIP4, SKP1 interacting partner 4 -0.099 0.083
67 245830_at AT1G57790 [F-box family protein] -0.090 -0.070
68 264840_at AT1G03440 [Leucine-rich repeat (LRR) family protein] -0.090 -0.053
69 260428_at AT1G72340 [NagB/RpiA/CoA transferase-like superfamily protein] -0.088 0.043
70 263923_at AT2G36485 [ENTH/VHS family protein] -0.083 0.056
71 266507_at AT2G47860 SETH6 -0.077 -0.033